RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
RNU1-55P-201ENST00000365510 RBM6P78332 1123 aaKnown RBP9.66□□□□□ -0.86
RNU1-55P-201ENST00000365510 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
RNU1-55P-201ENST00000365510 STK26Q9P289 416 aa9.66□□□□□ -0.86
RNU1-55P-201ENST00000365510 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
RNU1-55P-201ENST00000365510 RGS12O14924 1447 aa9.65□□□□□ -0.86
RNU1-55P-201ENST00000365510 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.86
RNU1-55P-201ENST00000365510 WAPLQ7Z5K2 1190 aa9.65□□□□□ -0.86
RNU1-55P-201ENST00000365510 USP21Q9UK80 565 aa9.65□□□□□ -0.86
RNU1-55P-201ENST00000365510 NEXMIFQ5QGS0 1516 aa9.65□□□□□ -0.86
RNU1-55P-201ENST00000365510 IFT172Q9UG01 1749 aa9.65□□□□□ -0.87
RNU1-55P-201ENST00000365510 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
RNU1-55P-201ENST00000365510 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
RNU1-55P-201ENST00000365510 ROBO2Q9HCK4 1378 aa9.64□□□□□ -0.87
RNU1-55P-201ENST00000365510 KDM2AQ9Y2K7 1162 aa9.64□□□□□ -0.87
RNU1-55P-201ENST00000365510 PPLO60437 1756 aa9.64□□□□□ -0.87
RNU1-55P-201ENST00000365510 FOXO3O43524 673 aa9.63□□□□□ -0.87
RNU1-55P-201ENST00000365510 TMEM132EQ6IEE7 984 aa9.63□□□□□ -0.87
RNU1-55P-201ENST00000365510 C1orf167Q5SNV9 1468 aa9.63□□□□□ -0.87
RNU1-55P-201ENST00000365510 RALGAPBQ86X10 1494 aa9.63□□□□□ -0.87
RNU1-55P-201ENST00000365510 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
RNU1-55P-201ENST00000365510 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
RNU1-55P-201ENST00000365510 ESCO1Q5FWF5 840 aa9.62□□□□□ -0.87
RNU1-55P-201ENST00000365510 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
RNU1-55P-201ENST00000365510 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
RNU1-55P-201ENST00000365510 XRN1Q8IZH2 1706 aaKnown RBP9.61□□□□□ -0.87
RNU1-55P-201ENST00000365510 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
RNU1-55P-201ENST00000365510 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 NBPF8Q3BBV2 869 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 DEFB132Q7Z7B7 95 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 LAMC1P11047 1609 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
RNU1-55P-201ENST00000365510 NALCNQ8IZF0 1738 aa9.59□□□□□ -0.87
RNU1-55P-201ENST00000365510 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
RNU1-55P-201ENST00000365510 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
RNU1-55P-201ENST00000365510 PLEKHH1Q9ULM0 1364 aa9.59□□□□□ -0.87
RNU1-55P-201ENST00000365510 KIAA1210Q9ULL0 1709 aa9.59□□□□□ -0.87
RNU1-55P-201ENST00000365510 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
RNU1-55P-201ENST00000365510 GPRASP1Q5JY77 1395 aa9.57□□□□□ -0.88
RNU1-55P-201ENST00000365510 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
RNU1-55P-201ENST00000365510 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
RNU1-55P-201ENST00000365510 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
RNU1-55P-201ENST00000365510 CARD11Q9BXL7 1154 aa9.56□□□□□ -0.88
RNU1-55P-201ENST00000365510 DCCP43146 1447 aa9.56□□□□□ -0.88
RNU1-55P-201ENST00000365510 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
RNU1-55P-201ENST00000365510 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
RNU1-55P-201ENST00000365510 ATRNO75882 1429 aa9.55□□□□□ -0.88
RNU1-55P-201ENST00000365510 EIF3AQ14152 1382 aaKnown RBP9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 USP47Q96K76 1375 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 CFAP70Q5T0N1 1121 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 LMOD2Q6P5Q4 547 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 C14orf93Q9H972 538 aaKnown RBP9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 SRCAPQ6ZRS2 3230 aa9.54□□□□□ -0.88
RNU1-55P-201ENST00000365510 ATAD2Q6PL18 1390 aa9.53□□□□□ -0.88
RNU1-55P-201ENST00000365510 PSDA5PKW4 1024 aaPredicted RBP9.53□□□□□ -0.88
RNU1-55P-201ENST00000365510 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNU1-55P-201ENST00000365510 ADGRB1O14514 1584 aa9.53□□□□□ -0.88
RNU1-55P-201ENST00000365510 NBPF1Q3BBV0 1214 aa9.52□□□□□ -0.89
RNU1-55P-201ENST00000365510 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
RNU1-55P-201ENST00000365510 PMFBP1Q8TBY8 1022 aa9.52□□□□□ -0.89
RNU1-55P-201ENST00000365510 FAM83GA6ND36 823 aa9.51□□□□□ -0.89
RNU1-55P-201ENST00000365510 UNC5CLQ8IV45 518 aa9.51□□□□□ -0.89
RNU1-55P-201ENST00000365510 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
RNU1-55P-201ENST00000365510 PXDNQ92626 1479 aa9.51□□□□□ -0.89
RNU1-55P-201ENST00000365510 SPATA31A3Q5VYP0 1347 aa9.5□□□□□ -0.89
RNU1-55P-201ENST00000365510 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
RNU1-55P-201ENST00000365510 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
RNU1-55P-201ENST00000365510 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 BRWD3Q6RI45 1802 aa9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 LRPPRCP42704 1394 aaKnown RBP9.49□□□□□ -0.89
RNU1-55P-201ENST00000365510 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
RNU1-55P-201ENST00000365510 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
RNU1-55P-201ENST00000365510 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
RNU1-55P-201ENST00000365510 KNDC1Q76NI1 1749 aa9.48□□□□□ -0.89
RNU1-55P-201ENST00000365510 TECPR2O15040 1411 aa9.48□□□□□ -0.89
RNU1-55P-201ENST00000365510 DLC1Q96QB1 1528 aa9.47□□□□□ -0.89
RNU1-55P-201ENST00000365510 GLI3P10071 1580 aa9.47□□□□□ -0.89
RNU1-55P-201ENST00000365510 PSME1Q06323 249 aa9.47□□□□□ -0.89
RNU1-55P-201ENST00000365510 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
RNU1-55P-201ENST00000365510 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 A0A0G2JS52 829 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 MYT1Q01538 1121 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 EN1Q05925 392 aaPredicted RBP9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 FAM98CQ17RN3 349 aaKnown RBP9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 PRAM1Q96QH2 718 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 CENPJQ9HC77 1338 aaPredicted RBP9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 ABCC11Q96J66 1382 aa9.46□□□□□ -0.9
RNU1-55P-201ENST00000365510 COL22A1Q8NFW1 1626 aaPredicted RBP9.45□□□□□ -0.9
RNU1-55P-201ENST00000365510 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
RNU1-55P-201ENST00000365510 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
RNU1-55P-201ENST00000365510 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms