RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TMEM132EQ6IEE7 984 aa29.01■■■□□ 2.23
SHISA4-201ENST00000362011 EIF3AQ14152 1382 aaKnown RBP29.01■■■□□ 2.23
SHISA4-201ENST00000362011 COL16A1Q07092 1604 aaPredicted RBP29.01■■■□□ 2.23
SHISA4-201ENST00000362011 HIRIP3Q9BW71 556 aaPredicted RBP28.99■■■□□ 2.23
SHISA4-201ENST00000362011 YTHDC2Q9H6S0 1430 aaKnown RBP28.98■■■□□ 2.23
SHISA4-201ENST00000362011 DLC1Q96QB1 1528 aa28.95■■■□□ 2.22
SHISA4-201ENST00000362011 METP08581 1390 aa28.95■■■□□ 2.22
SHISA4-201ENST00000362011 LRPPRCP42704 1394 aaKnown RBP28.94■■■□□ 2.22
SHISA4-201ENST00000362011 ST20-MTHFSA0A0A6YYL1 179 aa28.94■■■□□ 2.22
SHISA4-201ENST00000362011 C19orf44Q9H6X5 657 aa28.94■■■□□ 2.22
SHISA4-201ENST00000362011 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.93■■■□□ 2.22
SHISA4-201ENST00000362011 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
SHISA4-201ENST00000362011 AHDC1Q5TGY3 1603 aaPredicted RBP28.92■■■□□ 2.22
SHISA4-201ENST00000362011 CADPS2Q86UW7 1296 aa28.92■■■□□ 2.22
SHISA4-201ENST00000362011 XRN1Q8IZH2 1706 aaKnown RBP28.91■■■□□ 2.22
SHISA4-201ENST00000362011 SPATA31A6Q5VVP1 1343 aa28.9■■■□□ 2.22
SHISA4-201ENST00000362011 PTPRUQ92729 1446 aa28.89■■■□□ 2.22
SHISA4-201ENST00000362011 LRP6O75581 1613 aa28.89■■■□□ 2.22
SHISA4-201ENST00000362011 STK26Q9P289 416 aa28.89■■■□□ 2.21
SHISA4-201ENST00000362011 ABCC11Q96J66 1382 aa28.87■■■□□ 2.21
SHISA4-201ENST00000362011 TECPR2O15040 1411 aa28.86■■■□□ 2.21
SHISA4-201ENST00000362011 CENPJQ9HC77 1338 aaPredicted RBP28.85■■■□□ 2.21
SHISA4-201ENST00000362011 AMOTL2Q9Y2J4 779 aa28.85■■■□□ 2.21
SHISA4-201ENST00000362011 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
SHISA4-201ENST00000362011 ATF3P18847 181 aa28.84■■■□□ 2.21
SHISA4-201ENST00000362011 C14orf37Q86TY3 774 aa28.84■■■□□ 2.21
SHISA4-201ENST00000362011 DCCP43146 1447 aa28.83■■■□□ 2.21
SHISA4-201ENST00000362011 SBNO2Q9Y2G9 1366 aa28.82■■■□□ 2.2
SHISA4-201ENST00000362011 TESK2Q96S53 571 aa28.81■■■□□ 2.2
SHISA4-201ENST00000362011 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
SHISA4-201ENST00000362011 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
SHISA4-201ENST00000362011 SIRT1Q96EB6 747 aa28.77■■■□□ 2.2
SHISA4-201ENST00000362011 CCDC7Q96M83 1385 aa28.77■■■□□ 2.2
SHISA4-201ENST00000362011 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
SHISA4-201ENST00000362011 ZNF772Q68DY9 489 aaPredicted RBP28.76■■■□□ 2.19
SHISA4-201ENST00000362011 PRAM1Q96QH2 718 aa28.76■■■□□ 2.19
SHISA4-201ENST00000362011 POGKQ9P215 609 aa28.76■■■□□ 2.19
SHISA4-201ENST00000362011 TMF1P82094 1093 aa28.75■■■□□ 2.19
SHISA4-201ENST00000362011 C11orf95C9JLR9 678 aaPredicted RBP28.74■■■□□ 2.19
SHISA4-201ENST00000362011 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
SHISA4-201ENST00000362011 MST1RQ04912 1400 aa28.73■■■□□ 2.19
SHISA4-201ENST00000362011 KIF7Q2M1P5 1343 aa28.72■■■□□ 2.19
SHISA4-201ENST00000362011 ROBO2Q9HCK4 1378 aa28.72■■■□□ 2.19
SHISA4-201ENST00000362011 TULP4Q9NRJ4 1543 aa28.71■■■□□ 2.19
SHISA4-201ENST00000362011 PLEKHH1Q9ULM0 1364 aa28.7■■■□□ 2.19
SHISA4-201ENST00000362011 SAFB2Q14151 953 aaKnown RBP eCLIP28.7■■■□□ 2.19
SHISA4-201ENST00000362011 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.19
SHISA4-201ENST00000362011 ADGRB2O60241 1585 aa28.7■■■□□ 2.18
SHISA4-201ENST00000362011 NHSL1Q5SYE7 1610 aa28.69■■■□□ 2.18
SHISA4-201ENST00000362011 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
SHISA4-201ENST00000362011 MYOM1P52179 1685 aa28.68■■■□□ 2.18
SHISA4-201ENST00000362011 CDCA8Q53HL2 280 aa28.67■■■□□ 2.18
SHISA4-201ENST00000362011 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
SHISA4-201ENST00000362011 MINK1Q8N4C8 1332 aaPredicted RBP28.66■■■□□ 2.18
SHISA4-201ENST00000362011 UPF1Q92900 1129 aaKnown RBP eCLIP28.66■■■□□ 2.18
SHISA4-201ENST00000362011 CDK12Q9NYV4 1490 aaPredicted RBP28.66■■■□□ 2.18
SHISA4-201ENST00000362011 ADGRL3Q9HAR2 1447 aa28.65■■■□□ 2.18
SHISA4-201ENST00000362011 POLR3GLQ9BT43 218 aa28.65■■■□□ 2.18
SHISA4-201ENST00000362011 EVC2Q86UK5 1308 aa28.64■■■□□ 2.18
SHISA4-201ENST00000362011 RXRBP28702 533 aa28.61■■■□□ 2.17
SHISA4-201ENST00000362011 LRRC59Q96AG4 307 aaKnown RBP28.61■■■□□ 2.17
SHISA4-201ENST00000362011 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
SHISA4-201ENST00000362011 NUTM2BA6NNL0 878 aaPredicted RBP28.58■■■□□ 2.17
SHISA4-201ENST00000362011 NUTM2EB1AL46 878 aaPredicted RBP28.58■■■□□ 2.17
SHISA4-201ENST00000362011 NUTM2AQ8IVF1 878 aaPredicted RBP28.58■■■□□ 2.17
SHISA4-201ENST00000362011 AFF2P51816 1311 aa28.57■■■□□ 2.16
SHISA4-201ENST00000362011 FMN2Q9NZ56 1722 aa28.56■■■□□ 2.16
SHISA4-201ENST00000362011 PNPLA6Q8IY17 1366 aa28.56■■■□□ 2.16
SHISA4-201ENST00000362011 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
SHISA4-201ENST00000362011 PUS7Q96PZ0 661 aaKnown RBP28.55■■■□□ 2.16
SHISA4-201ENST00000362011 RGPD8O14715 1765 aaPredicted RBP28.55■■■□□ 2.16
SHISA4-201ENST00000362011 CDC42BPGQ6DT37 1551 aa28.53■■■□□ 2.16
SHISA4-201ENST00000362011 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
SHISA4-201ENST00000362011 C1orf167Q5SNV9 1468 aa28.53■■■□□ 2.16
SHISA4-201ENST00000362011 DDX17Q92841 729 aaKnown RBP28.52■■■□□ 2.16
SHISA4-201ENST00000362011 WASLO00401 505 aaPredicted RBP28.51■■■□□ 2.15
SHISA4-201ENST00000362011 SRPK2P78362 688 aaKnown RBP28.51■■■□□ 2.15
SHISA4-201ENST00000362011 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
SHISA4-201ENST00000362011 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.15
SHISA4-201ENST00000362011 CABP2Q9NPB3 220 aa28.49■■■□□ 2.15
SHISA4-201ENST00000362011 ATAD2Q6PL18 1390 aa28.49■■■□□ 2.15
SHISA4-201ENST00000362011 USP32Q8NFA0 1604 aa28.48■■■□□ 2.15
SHISA4-201ENST00000362011 SOS2Q07890 1332 aaPredicted RBP28.46■■■□□ 2.15
SHISA4-201ENST00000362011 RGS12O14924 1447 aa28.45■■■□□ 2.14
SHISA4-201ENST00000362011 RBM6P78332 1123 aaKnown RBP28.44■■■□□ 2.14
SHISA4-201ENST00000362011 C8orf37Q96NL8 207 aa28.44■■■□□ 2.14
SHISA4-201ENST00000362011 QTRT2Q9H974 415 aaKnown RBP28.44■■■□□ 2.14
SHISA4-201ENST00000362011 NINLQ9Y2I6 1382 aa28.44■■■□□ 2.14
SHISA4-201ENST00000362011 AKAP12Q02952 1782 aa28.44■■■□□ 2.14
SHISA4-201ENST00000362011 ATP7BP35670 1465 aa28.43■■■□□ 2.14
SHISA4-201ENST00000362011 ORAI2Q96SN7 254 aa28.41■■■□□ 2.14
SHISA4-201ENST00000362011 TMC1Q8TDI8 760 aa28.39■■■□□ 2.13
SHISA4-201ENST00000362011 ANKARQ7Z5J8 1434 aa28.39■■■□□ 2.13
SHISA4-201ENST00000362011 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
SHISA4-201ENST00000362011 PANK3Q9H999 370 aa28.37■■■□□ 2.13
SHISA4-201ENST00000362011 MON2Q7Z3U7 1717 aa28.36■■■□□ 2.13
SHISA4-201ENST00000362011 PPIP5K1Q6PFW1 1433 aa28.36■■■□□ 2.13
SHISA4-201ENST00000362011 COL22A1Q8NFW1 1626 aaPredicted RBP28.36■■■□□ 2.13
SHISA4-201ENST00000362011 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
SHISA4-201ENST00000362011 NGLY1Q96IV0 654 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms