RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 RAPGEF4Q8WZA2 1011 aa18■□□□□ 0.47
COL11A2-202ENST00000361917 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
COL11A2-202ENST00000361917 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
COL11A2-202ENST00000361917 C22orf23Q9BZE7 217 aa17.99■□□□□ 0.47
COL11A2-202ENST00000361917 SAFBQ15424 915 aaKnown RBP eCLIP17.99■□□□□ 0.47
COL11A2-202ENST00000361917 HSP90AB4PQ58FF6 505 aa17.99■□□□□ 0.47
COL11A2-202ENST00000361917 CCDC73Q6ZRK6 1079 aa17.99■□□□□ 0.47
COL11A2-202ENST00000361917 FAM13BQ9NYF5 915 aa17.98■□□□□ 0.47
COL11A2-202ENST00000361917 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
COL11A2-202ENST00000361917 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
COL11A2-202ENST00000361917 IFT57Q9NWB7 429 aa17.97■□□□□ 0.47
COL11A2-202ENST00000361917 NUCB2P80303 420 aa17.97■□□□□ 0.47
COL11A2-202ENST00000361917 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
COL11A2-202ENST00000361917 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
COL11A2-202ENST00000361917 CDC45O75419 566 aa17.94■□□□□ 0.46
COL11A2-202ENST00000361917 ATF3P18847 181 aa17.94■□□□□ 0.46
COL11A2-202ENST00000361917 KIF7Q2M1P5 1343 aa17.94■□□□□ 0.46
COL11A2-202ENST00000361917 NINLQ9Y2I6 1382 aa17.94■□□□□ 0.46
COL11A2-202ENST00000361917 TEX35Q5T0J7 233 aa17.94■□□□□ 0.46
COL11A2-202ENST00000361917 PDILTQ8N807 584 aa17.93■□□□□ 0.46
COL11A2-202ENST00000361917 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
COL11A2-202ENST00000361917 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
COL11A2-202ENST00000361917 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
COL11A2-202ENST00000361917 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
COL11A2-202ENST00000361917 FSD1Q9BTV5 496 aa17.93■□□□□ 0.46
COL11A2-202ENST00000361917 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
COL11A2-202ENST00000361917 RUFY1Q96T51 708 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 OLFM4Q6UX06 510 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 BRMS1Q9HCU9 246 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
COL11A2-202ENST00000361917 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
COL11A2-202ENST00000361917 CNTROBQ8N137 903 aa17.91■□□□□ 0.46
COL11A2-202ENST00000361917 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
COL11A2-202ENST00000361917 EPS15P42566 896 aa17.91■□□□□ 0.46
COL11A2-202ENST00000361917 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
COL11A2-202ENST00000361917 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
COL11A2-202ENST00000361917 ODF2Q5BJF6 829 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 NLRP6P59044 892 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.45
COL11A2-202ENST00000361917 PSMA5P28066 241 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 AK7Q96M32 723 aa17.89■□□□□ 0.45
COL11A2-202ENST00000361917 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
COL11A2-202ENST00000361917 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
COL11A2-202ENST00000361917 KRI1Q8N9T8 703 aaKnown RBP17.88■□□□□ 0.45
COL11A2-202ENST00000361917 RNF214Q8ND24 703 aa17.88■□□□□ 0.45
COL11A2-202ENST00000361917 ADAMTS8Q9UP79 889 aa17.88■□□□□ 0.45
COL11A2-202ENST00000361917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL11A2-202ENST00000361917 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
COL11A2-202ENST00000361917 NAT10Q9H0A0 1025 aaKnown RBP17.87■□□□□ 0.45
COL11A2-202ENST00000361917 C1orf115Q9H7X2 142 aa17.87■□□□□ 0.45
COL11A2-202ENST00000361917 XBP1P17861 261 aa17.87■□□□□ 0.45
COL11A2-202ENST00000361917 ZFYVE27Q5T4F4 411 aa17.87■□□□□ 0.45
COL11A2-202ENST00000361917 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
COL11A2-202ENST00000361917 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
COL11A2-202ENST00000361917 MTHFSP49914 203 aa17.86■□□□□ 0.45
COL11A2-202ENST00000361917 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
COL11A2-202ENST00000361917 ATP2B1P20020 1258 aa17.86■□□□□ 0.45
COL11A2-202ENST00000361917 ARGLU1Q9NWB6 273 aaPredicted RBP17.86■□□□□ 0.45
COL11A2-202ENST00000361917 CAGE1Q8TC20 777 aa17.85■□□□□ 0.45
COL11A2-202ENST00000361917 CCDC30Q5VVM6 783 aa17.85■□□□□ 0.45
COL11A2-202ENST00000361917 OFD1O75665 1012 aa17.85■□□□□ 0.45
COL11A2-202ENST00000361917 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
COL11A2-202ENST00000361917 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
COL11A2-202ENST00000361917 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
COL11A2-202ENST00000361917 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
COL11A2-202ENST00000361917 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
COL11A2-202ENST00000361917 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
COL11A2-202ENST00000361917 CCDC39Q9UFE4 941 aa17.84■□□□□ 0.45
COL11A2-202ENST00000361917 CLASRPQ8N2M8 674 aaKnown RBP17.84■□□□□ 0.45
COL11A2-202ENST00000361917 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
COL11A2-202ENST00000361917 ABTB2Q8N961 1025 aa17.83■□□□□ 0.45
COL11A2-202ENST00000361917 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.45
COL11A2-202ENST00000361917 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.45
COL11A2-202ENST00000361917 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
COL11A2-202ENST00000361917 SMC2O95347 1197 aa17.83■□□□□ 0.44
COL11A2-202ENST00000361917 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.44
COL11A2-202ENST00000361917 CDR1P51861 262 aa17.82■□□□□ 0.44
COL11A2-202ENST00000361917 SART3Q15020 963 aaKnown RBP17.82■□□□□ 0.44
COL11A2-202ENST00000361917 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
COL11A2-202ENST00000361917 ACBD3Q9H3P7 528 aa17.82■□□□□ 0.44
COL11A2-202ENST00000361917 CUX1P39880 1505 aa17.82■□□□□ 0.44
COL11A2-202ENST00000361917 CEBPZQ03701 1054 aaKnown RBP17.81■□□□□ 0.44
COL11A2-202ENST00000361917 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
COL11A2-202ENST00000361917 SKIDA1Q1XH10 827 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 STK11IPQ8N1F8 1099 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 GNAI3P08754 354 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
COL11A2-202ENST00000361917 NEK4P51957 841 aa17.8■□□□□ 0.44
COL11A2-202ENST00000361917 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
COL11A2-202ENST00000361917 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
COL11A2-202ENST00000361917 HSP90B2PQ58FF3 399 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms