RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 PPP2R3CQ969Q6 453 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 PTCH1Q13635 1447 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 RGL2O15211 777 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 ALDH1A1P00352 501 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 ELMSAN1Q6PJG2 1045 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 SUPT20HQ8NEM7 779 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 NCOA2Q15596 1464 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 GRM1Q13255 1194 aa4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 WWC1Q8IX03 1113 aa4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 HIRIP3Q9BW71 556 aaPredicted RBP4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 FAM135BQ49AJ0 1406 aa4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 TRIM26Q12899 539 aaPredicted RBP4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 BICDL1Q6ZP65 573 aa4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 PODXL2Q9NZ53 605 aa4.15□□□□□ -1.74
PCDH11X-203ENST00000361724 BMS1Q14692 1282 aaKnown RBP4.15□□□□□ -1.75
PCDH11X-203ENST00000361724 NCOA3Q9Y6Q9 1424 aa4.15□□□□□ -1.75
PCDH11X-203ENST00000361724 VEGFAP15692 232 aaPredicted RBP4.15□□□□□ -1.75
PCDH11X-203ENST00000361724 DLL1O00548 723 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 PKN1Q16512 942 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 ESCO1Q5FWF5 840 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 UHRF1BP1LA0JNW5 1464 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 TTC21AQ8NDW8 1320 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 FCHSD2O94868 740 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 PLA2R1Q13018 1463 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 SEPT12Q8IYM1 358 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 C2orf69Q8N8R5 385 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 FMN1Q68DA7 1419 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 DHX57Q6P158 1386 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 GTPBP6O43824 516 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 PLEKHG5O94827 1062 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 HSP90AB1P08238 724 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 TMEM87AQ8NBN3 555 aa4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF526Q8TF50 670 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-203ENST00000361724 ZC3H4Q9UPT8 1303 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 PSDA5PKW4 1024 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 NLRP13Q86W25 1043 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 NLRP1Q9C000 1473 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF335Q9H4Z2 1342 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF518AQ6AHZ1 1483 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 CCDC141Q6ZP82 1450 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 SREBF2Q12772 1141 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 AMER1Q5JTC6 1135 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 GJD4Q96KN9 370 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 THRAP3Q9Y2W1 955 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 USP6P35125 1406 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 GLI2P10070 1586 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 CHAMP1Q96JM3 812 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 RSPH6AQ9H0K4 717 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 CTDP1Q9Y5B0 961 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 SSH2Q76I76 1423 aa4.13□□□□□ -1.75
PCDH11X-203ENST00000361724 SHANK2Q9UPX8 1470 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 ADGRB2O60241 1585 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 GAS2L1Q99501 681 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 UPF3BQ9BZI7 483 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 CDK13Q14004 1512 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 LPXNO60711 386 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 DDB1Q16531 1140 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 BCL2L13Q9BXK5 485 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 FGD5Q6ZNL6 1462 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 SLC34A2O95436 690 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 DGKZQ13574 1117 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 TOM1L2Q6ZVM7 507 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 KLRG1Q96E93 195 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 TAOK2Q9UL54 1235 aa4.12□□□□□ -1.75
PCDH11X-203ENST00000361724 WASLO00401 505 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 STRN4Q9NRL3 753 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF316A6NFI3 1004 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 ERO1AQ96HE7 468 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 TMOD2Q9NZR1 351 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF652Q9Y2D9 606 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 CD2APQ9Y5K6 639 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 P3H3Q8IVL6 736 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 ZNF784Q8NCA9 323 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 DPF3Q92784 378 aa4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 SYTL4Q96C24 671 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 TOP2AP11388 1531 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-203ENST00000361724 ZPR1O75312 459 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 HSPA1AP0DMV8 641 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 HSPA1BP0DMV9 641 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 CCDC152Q4G0S7 254 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 NCBP3Q53F19 620 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 CDCA8Q53HL2 280 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 RAPGEF4Q8WZA2 1011 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 MED1Q15648 1581 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 ST5P78524 1137 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 SLC27A3Q5K4L6 730 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 C9orf131Q5VYM1 1079 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 CC2D2BQ6DHV5 1058 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 RAB11FIP4Q86YS3 637 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 KCNH5Q8NCM2 988 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 STAC3Q96MF2 364 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 LGR6Q9HBX8 967 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 BCS1LQ9Y276 419 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 EIF4G3O43432 1585 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 ERICH3Q5RHP9 1530 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 PIK3R4Q99570 1358 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 MAP3K5Q99683 1374 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 TRIM34Q9BYJ4 488 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 RUBCNLQ9H714 662 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms