RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 KIF21BO75037 1637 aa13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 NEUROD6Q96NK8 337 aa13.05□□□□□ -0.32
LDLRAD4-202ENST00000361303 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
LDLRAD4-202ENST00000361303 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD4-202ENST00000361303 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD4-202ENST00000361303 WASHC4Q2M389 1173 aa13.04□□□□□ -0.32
LDLRAD4-202ENST00000361303 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD4-202ENST00000361303 EPS15P42566 896 aa13.03□□□□□ -0.32
LDLRAD4-202ENST00000361303 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
LDLRAD4-202ENST00000361303 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD4-202ENST00000361303 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-202ENST00000361303 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.32
LDLRAD4-202ENST00000361303 APAF1O14727 1248 aa13.02□□□□□ -0.32
LDLRAD4-202ENST00000361303 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.32
LDLRAD4-202ENST00000361303 FYB1O15117 783 aa13.02□□□□□ -0.33
LDLRAD4-202ENST00000361303 PSMA5P28066 241 aa13.02□□□□□ -0.33
LDLRAD4-202ENST00000361303 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-202ENST00000361303 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
LDLRAD4-202ENST00000361303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 HIP1O00291 1037 aa13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 BICD2Q8TD16 824 aa13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
LDLRAD4-202ENST00000361303 FGD6Q6ZV73 1430 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 CNTROBQ8N137 903 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
LDLRAD4-202ENST00000361303 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 COG6Q9Y2V7 657 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 HMOX1P09601 288 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 STRN4Q9NRL3 753 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
LDLRAD4-202ENST00000361303 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
LDLRAD4-202ENST00000361303 TMEM132AQ24JP5 1023 aa12.99□□□□□ -0.33
LDLRAD4-202ENST00000361303 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
LDLRAD4-202ENST00000361303 PLIN1O60240 522 aa12.99□□□□□ -0.33
LDLRAD4-202ENST00000361303 GNAI3P08754 354 aa12.99□□□□□ -0.33
LDLRAD4-202ENST00000361303 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
LDLRAD4-202ENST00000361303 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
LDLRAD4-202ENST00000361303 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 CDR1P51861 262 aa12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
LDLRAD4-202ENST00000361303 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
LDLRAD4-202ENST00000361303 CABP4P57796 275 aa12.96□□□□□ -0.33
LDLRAD4-202ENST00000361303 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
LDLRAD4-202ENST00000361303 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
LDLRAD4-202ENST00000361303 TXLNAP40222 546 aa12.96□□□□□ -0.34
LDLRAD4-202ENST00000361303 CASKIN1Q8WXD9 1431 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 CCDC173Q0VFZ6 552 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 FOXD4L6Q3SYB3 417 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 FOXD4L3Q6VB84 417 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 OFD1O75665 1012 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 NUCB2P80303 420 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 SLC52A1Q9NWF4 448 aa12.95□□□□□ -0.34
LDLRAD4-202ENST00000361303 IGF1RP08069 1367 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 NUTM2BA6NNL0 878 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 NUTM2EB1AL46 878 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 NUTM2AQ8IVF1 878 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 EFCAB5A4FU69 1503 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 TTC39AQ5SRH9 613 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
LDLRAD4-202ENST00000361303 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
LDLRAD4-202ENST00000361303 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
LDLRAD4-202ENST00000361303 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
LDLRAD4-202ENST00000361303 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
LDLRAD4-202ENST00000361303 NCAPD3P42695 1498 aa12.93□□□□□ -0.34
LDLRAD4-202ENST00000361303 NACAP1Q9BZK3 213 aa12.92□□□□□ -0.34
LDLRAD4-202ENST00000361303 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
LDLRAD4-202ENST00000361303 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
LDLRAD4-202ENST00000361303 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms