RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SPINK5Q9NQ38 1064 aaPredicted RBP24.76■■□□□ 1.55
CDC42BPB-201ENST00000361246 GOLGA6L19H0YKK7 550 aa24.75■■□□□ 1.55
CDC42BPB-201ENST00000361246 RUFY2Q8WXA3 655 aa24.75■■□□□ 1.55
CDC42BPB-201ENST00000361246 PHLDB1Q86UU1 1377 aa24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 CPLX2Q6PUV4 134 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 PATL2C9JE40 543 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 BECN2A8MW95 431 aa24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 VPS37CA5D8V6 355 aaPredicted RBP24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 LNPKQ9C0E8 428 aa24.73■■□□□ 1.55
CDC42BPB-201ENST00000361246 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
CDC42BPB-201ENST00000361246 CABP4P57796 275 aa24.72■■□□□ 1.55
CDC42BPB-201ENST00000361246 GOLGA6L1Q8N7Z2 621 aa24.72■■□□□ 1.55
CDC42BPB-201ENST00000361246 ZNF592Q92610 1267 aa24.71■■□□□ 1.55
CDC42BPB-201ENST00000361246 CNNM1Q9NRU3 951 aa24.71■■□□□ 1.55
CDC42BPB-201ENST00000361246 DZIP1LQ8IYY4 767 aaKnown RBP24.7■■□□□ 1.55
CDC42BPB-201ENST00000361246 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
CDC42BPB-201ENST00000361246 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.54
CDC42BPB-201ENST00000361246 RUNDC1Q96C34 613 aa24.69■■□□□ 1.54
CDC42BPB-201ENST00000361246 SIL1Q9H173 461 aa24.69■■□□□ 1.54
CDC42BPB-201ENST00000361246 C1orf115Q9H7X2 142 aa24.69■■□□□ 1.54
CDC42BPB-201ENST00000361246 UBTFL1P0CB47 393 aaPredicted RBP24.69■■□□□ 1.54
CDC42BPB-201ENST00000361246 BICD2Q8TD16 824 aa24.69■■□□□ 1.54
CDC42BPB-201ENST00000361246 PHF14O94880 888 aa24.68■■□□□ 1.54
CDC42BPB-201ENST00000361246 PANK1Q8TE04 598 aa24.68■■□□□ 1.54
CDC42BPB-201ENST00000361246 DDX49Q9Y6V7 483 aaKnown RBP24.68■■□□□ 1.54
CDC42BPB-201ENST00000361246 MAP4K4O95819 1239 aaPredicted RBP24.67■■□□□ 1.54
CDC42BPB-201ENST00000361246 RRP1P56182 461 aaKnown RBP24.67■■□□□ 1.54
CDC42BPB-201ENST00000361246 ATP2B1P20020 1258 aa24.67■■□□□ 1.54
CDC42BPB-201ENST00000361246 ADAMTS2O95450 1211 aa24.67■■□□□ 1.54
CDC42BPB-201ENST00000361246 CCDC85AQ96PX6 553 aaPredicted RBP24.67■■□□□ 1.54
CDC42BPB-201ENST00000361246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.67■■□□□ 1.547e-7■■■■■ 172.3
CDC42BPB-201ENST00000361246 RALYLQ86SE5 291 aaKnown RBP24.66■■□□□ 1.54
CDC42BPB-201ENST00000361246 TATP17735 454 aaPredicted RBP24.66■■□□□ 1.54
CDC42BPB-201ENST00000361246 PDE3BQ13370 1112 aa24.66■■□□□ 1.54
CDC42BPB-201ENST00000361246 MTHFSP49914 203 aa24.65■■□□□ 1.54
CDC42BPB-201ENST00000361246 ZC3H6P61129 1189 aaKnown RBP24.65■■□□□ 1.54
CDC42BPB-201ENST00000361246 NAP1L1P55209 391 aaKnown RBP24.65■■□□□ 1.54
CDC42BPB-201ENST00000361246 DDX19BQ9UMR2 479 aa24.64■■□□□ 1.54
CDC42BPB-201ENST00000361246 ZFYVE27Q5T4F4 411 aa24.64■■□□□ 1.53
CDC42BPB-201ENST00000361246 CENPQQ7L2Z9 268 aaPredicted RBP24.64■■□□□ 1.53
CDC42BPB-201ENST00000361246 CDK19Q9BWU1 502 aa24.63■■□□□ 1.53
CDC42BPB-201ENST00000361246 MIA2Q96PC5 1412 aa24.63■■□□□ 1.53
CDC42BPB-201ENST00000361246 TTC39AQ5SRH9 613 aa24.63■■□□□ 1.53
CDC42BPB-201ENST00000361246 API5Q9BZZ5 524 aaKnown RBP24.63■■□□□ 1.53
CDC42BPB-201ENST00000361246 TPM1P09493 284 aa24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 CCDC47Q96A33 483 aaKnown RBP24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 PLEKHO1Q53GL0 409 aaPredicted RBP24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 ZNF219Q9P2Y4 722 aaPredicted RBP24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 GNAI1P63096 354 aa24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 R3HCC1Q9Y3T6 440 aaKnown RBP24.62■■□□□ 1.53
CDC42BPB-201ENST00000361246 FSD1Q9BTV5 496 aa24.61■■□□□ 1.53
CDC42BPB-201ENST00000361246 RNF20Q5VTR2 975 aa24.61■■□□□ 1.53
CDC42BPB-201ENST00000361246 IPO9Q96P70 1041 aaKnown RBP24.6■■□□□ 1.53
CDC42BPB-201ENST00000361246 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
CDC42BPB-201ENST00000361246 PRKRIP1Q9H875 184 aaPredicted RBP24.6■■□□□ 1.53
CDC42BPB-201ENST00000361246 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
CDC42BPB-201ENST00000361246 CHMP4BP1P59074 171 aa24.59■■□□□ 1.53
CDC42BPB-201ENST00000361246 RRS1Q15050 365 aaKnown RBP24.59■■□□□ 1.53
CDC42BPB-201ENST00000361246 PAXIP1Q6ZW49 1069 aaPredicted RBP24.58■■□□□ 1.53
CDC42BPB-201ENST00000361246 PRKAR2BP31323 418 aa24.58■■□□□ 1.53
CDC42BPB-201ENST00000361246 ERC2O15083 957 aa24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 CT47A1Q5JQC4 288 aaPredicted RBP24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 ZSCAN29Q8IWY8 852 aaPredicted RBP24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 SURF6O75683 361 aaKnown RBP24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 CABP1Q9NZU7 370 aa24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 EPS15P42566 896 aa24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 PRDM11Q9NQV5 511 aa24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 SMC3Q9UQE7 1217 aa24.57■■□□□ 1.52
CDC42BPB-201ENST00000361246 THEMISQ8N1K5 641 aaPredicted RBP24.56■■□□□ 1.52
CDC42BPB-201ENST00000361246 SULT6B1Q6IMI4 303 aa24.56■■□□□ 1.52
CDC42BPB-201ENST00000361246 NESP48681 1621 aa24.56■■□□□ 1.52
CDC42BPB-201ENST00000361246 SAFBQ15424 915 aaKnown RBP eCLIP24.56■■□□□ 1.52
CDC42BPB-201ENST00000361246 TBC1D2BQ9UPU7 963 aa24.56■■□□□ 1.52
CDC42BPB-201ENST00000361246 REC8O95072 547 aa24.55■■□□□ 1.52
CDC42BPB-201ENST00000361246 PIBF1Q8WXW3 757 aa24.55■■□□□ 1.52
CDC42BPB-201ENST00000361246 ROCK1Q13464 1354 aa24.55■■□□□ 1.52
CDC42BPB-201ENST00000361246 ANKLE2Q86XL3 938 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 PAF1Q8N7H5 531 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 PDE4AP27815 886 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 CCDC30Q5VVM6 783 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 ODF2Q5BJF6 829 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 MYOM3Q5VTT5 1437 aa24.54■■□□□ 1.52
CDC42BPB-201ENST00000361246 TTLL5Q6EMB2 1281 aa24.53■■□□□ 1.52
CDC42BPB-201ENST00000361246 MYCNP04198 464 aaPredicted RBP24.53■■□□□ 1.52
CDC42BPB-201ENST00000361246 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
CDC42BPB-201ENST00000361246 ATP6V1DQ9Y5K8 247 aa24.52■■□□□ 1.52
CDC42BPB-201ENST00000361246 CEBPZQ03701 1054 aaKnown RBP24.52■■□□□ 1.52
CDC42BPB-201ENST00000361246 TSR2Q969E8 191 aaKnown RBP24.51■■□□□ 1.51
CDC42BPB-201ENST00000361246 ZNF530Q6P9A1 599 aaPredicted RBP24.51■■□□□ 1.51
CDC42BPB-201ENST00000361246 SLC12A5Q9H2X9 1139 aa24.5■■□□□ 1.51
CDC42BPB-201ENST00000361246 INTS3Q68E01 1043 aaKnown RBP24.5■■□□□ 1.51
CDC42BPB-201ENST00000361246 ANKRD20A12PQ8NF67 263 aa24.49■■□□□ 1.51
CDC42BPB-201ENST00000361246 BRMS1Q9HCU9 246 aa24.49■■□□□ 1.51
CDC42BPB-201ENST00000361246 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
CDC42BPB-201ENST00000361246 STK3Q13188 491 aa24.48■■□□□ 1.51
CDC42BPB-201ENST00000361246 ADAMTS8Q9UP79 889 aa24.48■■□□□ 1.51
CDC42BPB-201ENST00000361246 DDX11L8A8MPP1 907 aa24.48■■□□□ 1.51
CDC42BPB-201ENST00000361246 GAS2L2Q8NHY3 880 aa24.48■■□□□ 1.51
CDC42BPB-201ENST00000361246 CNTROBQ8N137 903 aa24.48■■□□□ 1.51
CDC42BPB-201ENST00000361246 NBPF1Q3BBV0 1214 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms