RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
CLCN3-202ENST00000360642 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
CLCN3-202ENST00000360642 TROQ12816 1431 aaPredicted RBP10.22□□□□□ -0.77
CLCN3-202ENST00000360642 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
CLCN3-202ENST00000360642 CHMP7Q8WUX9 453 aaPredicted RBP10.21□□□□□ -0.77
CLCN3-202ENST00000360642 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
CLCN3-202ENST00000360642 SUPT16HQ9Y5B9 1047 aaKnown RBP10.21□□□□□ -0.77
CLCN3-202ENST00000360642 TIE1P35590 1138 aa10.21□□□□□ -0.78
CLCN3-202ENST00000360642 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.78
CLCN3-202ENST00000360642 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
CLCN3-202ENST00000360642 ADCY10Q96PN6 1610 aa10.21□□□□□ -0.78
CLCN3-202ENST00000360642 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
CLCN3-202ENST00000360642 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
CLCN3-202ENST00000360642 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
CLCN3-202ENST00000360642 ABL2P42684 1182 aa10.19□□□□□ -0.78
CLCN3-202ENST00000360642 METTL3Q86U44 580 aaKnown RBP10.19□□□□□ -0.78
CLCN3-202ENST00000360642 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLCN3-202ENST00000360642 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-202ENST00000360642 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
CLCN3-202ENST00000360642 ANP32CO43423 234 aa10.19□□□□□ -0.78
CLCN3-202ENST00000360642 GPATCH8Q9UKJ3 1502 aaKnown RBP10.19□□□□□ -0.78
CLCN3-202ENST00000360642 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-202ENST00000360642 QPCTQ16769 361 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
CLCN3-202ENST00000360642 RPRD2Q5VT52 1461 aaKnown RBP10.18□□□□□ -0.78
CLCN3-202ENST00000360642 CLCN1P35523 988 aa10.17□□□□□ -0.78
CLCN3-202ENST00000360642 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
CLCN3-202ENST00000360642 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
CLCN3-202ENST00000360642 MTMR14Q8NCE2 650 aa10.17□□□□□ -0.78
CLCN3-202ENST00000360642 FAM217BQ9NTX9 383 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-202ENST00000360642 KIF14Q15058 1648 aa10.17□□□□□ -0.78
CLCN3-202ENST00000360642 RBM25P49756 843 aaKnown RBP10.16□□□□□ -0.78
CLCN3-202ENST00000360642 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 ABCA8O94911 1581 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-202ENST00000360642 RFC5P40937 340 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 L3MBTL2Q969R5 705 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 ADGRL2O95490 1459 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 TBC1D12O60347 775 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
CLCN3-202ENST00000360642 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-202ENST00000360642 TEX14Q8IWB6 1497 aa10.15□□□□□ -0.78
CLCN3-202ENST00000360642 HSPA5P11021 654 aaKnown RBP10.15□□□□□ -0.78
CLCN3-202ENST00000360642 CROCC2H7BZ55 1655 aa10.15□□□□□ -0.78
CLCN3-202ENST00000360642 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
CLCN3-202ENST00000360642 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-202ENST00000360642 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.79
CLCN3-202ENST00000360642 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
CLCN3-202ENST00000360642 EN1Q05925 392 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-202ENST00000360642 PZPP20742 1482 aa10.14□□□□□ -0.79
CLCN3-202ENST00000360642 G3V3G9 751 aa10.14□□□□□ -0.79
CLCN3-202ENST00000360642 EIF4G2P78344 907 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLCN3-202ENST00000360642 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
CLCN3-202ENST00000360642 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
CLCN3-202ENST00000360642 ATP10BO94823 1461 aa10.13□□□□□ -0.79
CLCN3-202ENST00000360642 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
CLCN3-202ENST00000360642 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
CLCN3-202ENST00000360642 PTGER2P43116 358 aa10.12□□□□□ -0.79
CLCN3-202ENST00000360642 GLMNQ92990 594 aa10.11□□□□□ -0.79
CLCN3-202ENST00000360642 CDC42BPAQ5VT25 1732 aa10.11□□□□□ -0.79
CLCN3-202ENST00000360642 C3orf80F5H4A9 247 aa10.11□□□□□ -0.79
CLCN3-202ENST00000360642 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
CLCN3-202ENST00000360642 SPATA31E1Q6ZUB1 1445 aa10.11□□□□□ -0.79
CLCN3-202ENST00000360642 MFAP1P55081 439 aaKnown RBP10.11□□□□□ -0.79
CLCN3-202ENST00000360642 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
CLCN3-202ENST00000360642 CDCA8Q53HL2 280 aa10.1□□□□□ -0.79
CLCN3-202ENST00000360642 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
CLCN3-202ENST00000360642 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
CLCN3-202ENST00000360642 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 HLA-CQ95604 372 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 SERPINA10Q9UK55 444 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 IGSF3O75054 1194 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.795e-7■■■□□ 16.1
CLCN3-202ENST00000360642 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 KIAA1107Q9UPP5 1409 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 MBD5Q9P267 1494 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 C11orf95C9JLR9 678 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-202ENST00000360642 NDUFV2P19404 249 aa10.09□□□□□ -0.79
CLCN3-202ENST00000360642 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
CLCN3-202ENST00000360642 CCDC7Q96M83 1385 aa10.08□□□□□ -0.8
CLCN3-202ENST00000360642 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
CLCN3-202ENST00000360642 ANKRD50Q9ULJ7 1429 aa10.07□□□□□ -0.8
CLCN3-202ENST00000360642 PXYLP1Q8TE99 480 aa10.07□□□□□ -0.8
CLCN3-202ENST00000360642 POLR1AO95602 1720 aaPredicted RBP10.06□□□□□ -0.8
CLCN3-202ENST00000360642 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
CLCN3-202ENST00000360642 AP1G2O75843 785 aa10.06□□□□□ -0.8
CLCN3-202ENST00000360642 PLCG2P16885 1265 aa10.06□□□□□ -0.8
CLCN3-202ENST00000360642 ATMINO43313 823 aaPredicted RBP10.06□□□□□ -0.8
CLCN3-202ENST00000360642 C9orf84Q5VXU9 1444 aa10.06□□□□□ -0.8
CLCN3-202ENST00000360642 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
CLCN3-202ENST00000360642 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
CLCN3-202ENST00000360642 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
CLCN3-202ENST00000360642 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms