RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ANKRD50Q9ULJ7 1429 aa9.71□□□□□ -0.85
CDC42SE2-201ENST00000360515 TRPC5Q9UL62 973 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE2-201ENST00000360515 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
CDC42SE2-201ENST00000360515 WNK3Q9BYP7 1800 aa9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 QSER1Q2KHR3 1735 aa9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 SLC26A8Q96RN1 970 aa9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 PARD3Q8TEW0 1356 aa9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
CDC42SE2-201ENST00000360515 ATF3P18847 181 aa9.66□□□□□ -0.86
CDC42SE2-201ENST00000360515 DLC1Q96QB1 1528 aa9.65□□□□□ -0.86
CDC42SE2-201ENST00000360515 PARP4Q9UKK3 1724 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-201ENST00000360515 METP08581 1390 aa9.65□□□□□ -0.87
CDC42SE2-201ENST00000360515 NRXN1Q9ULB1 1477 aa9.65□□□□□ -0.87
CDC42SE2-201ENST00000360515 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
CDC42SE2-201ENST00000360515 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE2-201ENST00000360515 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
CDC42SE2-201ENST00000360515 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
CDC42SE2-201ENST00000360515 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
CDC42SE2-201ENST00000360515 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
CDC42SE2-201ENST00000360515 RPGRIP1LQ68CZ1 1315 aa9.62□□□□□ -0.87
CDC42SE2-201ENST00000360515 PHRF1Q9P1Y6 1649 aaKnown RBP9.61□□□□□ -0.87
CDC42SE2-201ENST00000360515 LRPPRCP42704 1394 aaKnown RBP9.61□□□□□ -0.87
CDC42SE2-201ENST00000360515 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
CDC42SE2-201ENST00000360515 TOPAZ1Q8N9V7 1692 aa9.6□□□□□ -0.87
CDC42SE2-201ENST00000360515 LMO7Q8WWI1 1683 aa9.6□□□□□ -0.87
CDC42SE2-201ENST00000360515 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
CDC42SE2-201ENST00000360515 ITSN1Q15811 1721 aa9.6□□□□□ -0.87
CDC42SE2-201ENST00000360515 RGPD8O14715 1765 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-201ENST00000360515 GJD4Q96KN9 370 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-201ENST00000360515 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
CDC42SE2-201ENST00000360515 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-201ENST00000360515 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
CDC42SE2-201ENST00000360515 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
CDC42SE2-201ENST00000360515 VPS72Q15906 364 aa9.58□□□□□ -0.88
CDC42SE2-201ENST00000360515 USP21Q9UK80 565 aa9.58□□□□□ -0.88
CDC42SE2-201ENST00000360515 BCL9O00512 1426 aa9.57□□□□□ -0.88
CDC42SE2-201ENST00000360515 TNS3Q68CZ2 1445 aa9.57□□□□□ -0.88
CDC42SE2-201ENST00000360515 CHD4Q14839 1912 aa9.57□□□□□ -0.88
CDC42SE2-201ENST00000360515 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
CDC42SE2-201ENST00000360515 RRP7BPQ9NSQ0 103 aa9.57□□□□□ -0.88
CDC42SE2-201ENST00000360515 NINLQ9Y2I6 1382 aa9.56□□□□□ -0.88
CDC42SE2-201ENST00000360515 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
CDC42SE2-201ENST00000360515 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
CDC42SE2-201ENST00000360515 USP54Q70EL1 1684 aa9.56□□□□□ -0.88
CDC42SE2-201ENST00000360515 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
CDC42SE2-201ENST00000360515 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
CDC42SE2-201ENST00000360515 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
CDC42SE2-201ENST00000360515 NAIPQ13075 1403 aa9.54□□□□□ -0.88
CDC42SE2-201ENST00000360515 PIK3C2GO75747 1445 aa9.53□□□□□ -0.88
CDC42SE2-201ENST00000360515 ABCC6O95255 1503 aa9.53□□□□□ -0.88
CDC42SE2-201ENST00000360515 C8orf37Q96NL8 207 aa9.53□□□□□ -0.88
CDC42SE2-201ENST00000360515 SPATA31E1Q6ZUB1 1445 aa9.53□□□□□ -0.88
CDC42SE2-201ENST00000360515 HRCP23327 699 aa9.52□□□□□ -0.89
CDC42SE2-201ENST00000360515 ARHGEF10O15013 1369 aa9.51□□□□□ -0.89
CDC42SE2-201ENST00000360515 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
CDC42SE2-201ENST00000360515 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
CDC42SE2-201ENST00000360515 CAMTA1Q9Y6Y1 1673 aa9.5□□□□□ -0.89
CDC42SE2-201ENST00000360515 ATP7BP35670 1465 aa9.5□□□□□ -0.89
CDC42SE2-201ENST00000360515 NRKQ7Z2Y5 1582 aa9.5□□□□□ -0.89
CDC42SE2-201ENST00000360515 KIAA1210Q9ULL0 1709 aa9.5□□□□□ -0.89
CDC42SE2-201ENST00000360515 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-201ENST00000360515 LRRC37A3O60309 1634 aa9.48□□□□□ -0.89
CDC42SE2-201ENST00000360515 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE2-201ENST00000360515 COL18A1P39060 1754 aa9.48□□□□□ -0.89
CDC42SE2-201ENST00000360515 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
CDC42SE2-201ENST00000360515 MYOM1P52179 1685 aa9.47□□□□□ -0.89
CDC42SE2-201ENST00000360515 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-201ENST00000360515 AKAP12Q02952 1782 aa9.46□□□□□ -0.89
CDC42SE2-201ENST00000360515 ANKRD30BQ9BXX2 1392 aa9.45□□□□□ -0.9
CDC42SE2-201ENST00000360515 CAMKK2Q96RR4 588 aa9.45□□□□□ -0.9
CDC42SE2-201ENST00000360515 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
CDC42SE2-201ENST00000360515 EP400Q96L91 3159 aa9.45□□□□□ -0.9
CDC42SE2-201ENST00000360515 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-201ENST00000360515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.44□□□□□ -0.91e-6■■■□□ 18.6
CDC42SE2-201ENST00000360515 SPATA31A5Q5VU36 1347 aa9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 SPATA31A7Q8IWB4 1347 aa9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 SHANK3Q9BYB0 1731 aa9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-201ENST00000360515 KRT27Q7Z3Y8 459 aa9.43□□□□□ -0.9
CDC42SE2-201ENST00000360515 NUP155O75694 1391 aa9.43□□□□□ -0.9
CDC42SE2-201ENST00000360515 BAG6P46379 1132 aa9.43□□□□□ -0.9
CDC42SE2-201ENST00000360515 SLIT3O75094 1523 aa9.43□□□□□ -0.9
CDC42SE2-201ENST00000360515 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 QRICH2Q9H0J4 1663 aa9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 CPDO75976 1380 aa9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-201ENST00000360515 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
CDC42SE2-201ENST00000360515 C14orf37Q86TY3 774 aa9.41□□□□□ -0.9
CDC42SE2-201ENST00000360515 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms