RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 RTEL1-TNFRSF6BF6WH68 1400 aa10.7□□□□□ -0.7
CD46-206ENST00000360212 DYNC1I1O14576 645 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 DDIT3P35638 169 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 ATP2B3Q16720 1220 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 SMC5Q8IY18 1101 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
CD46-206ENST00000360212 HNRNPMP52272 730 aaKnown RBP eCLIP10.69□□□□□ -0.79e-8■■■■■ 28.4
CD46-206ENST00000360212 ZKSCAN5Q9Y2L8 839 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 SASS6Q6UVJ0 657 aa10.69□□□□□ -0.7
CD46-206ENST00000360212 KLHL40Q2TBA0 621 aa10.68□□□□□ -0.7
CD46-206ENST00000360212 CGNQ9P2M7 1197 aaKnown RBP10.68□□□□□ -0.7
CD46-206ENST00000360212 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
CD46-206ENST00000360212 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
CD46-206ENST00000360212 NSFL1CQ9UNZ2 370 aaKnown RBP10.68□□□□□ -0.7
CD46-206ENST00000360212 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
CD46-206ENST00000360212 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
CD46-206ENST00000360212 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
CD46-206ENST00000360212 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
CD46-206ENST00000360212 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
CD46-206ENST00000360212 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
CD46-206ENST00000360212 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
CD46-206ENST00000360212 SMC4Q9NTJ3 1288 aa10.67□□□□□ -0.7
CD46-206ENST00000360212 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
CD46-206ENST00000360212 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
CD46-206ENST00000360212 ZNF500O60304 480 aaPredicted RBP10.66□□□□□ -0.7
CD46-206ENST00000360212 MTERF4Q7Z6M4 381 aaKnown RBP10.66□□□□□ -0.7
CD46-206ENST00000360212 ZNF710Q8N1W2 664 aa10.66□□□□□ -0.7
CD46-206ENST00000360212 KIF2CQ99661 725 aa10.66□□□□□ -0.7
CD46-206ENST00000360212 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
CD46-206ENST00000360212 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
CD46-206ENST00000360212 SECISBP2LQ93073 1101 aaKnown RBP10.66□□□□□ -0.7
CD46-206ENST00000360212 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
CD46-206ENST00000360212 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
CD46-206ENST00000360212 BRD2P25440 801 aaKnown RBP10.65□□□□□ -0.7
CD46-206ENST00000360212 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
CD46-206ENST00000360212 GPT2Q8TD30 523 aa10.65□□□□□ -0.7
CD46-206ENST00000360212 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.7
CD46-206ENST00000360212 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
CD46-206ENST00000360212 KIF20AO95235 890 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 PRAG1Q86YV5 1406 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 ZGPATQ8N5A5 531 aaKnown RBP10.64□□□□□ -0.71
CD46-206ENST00000360212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
CD46-206ENST00000360212 E9PCH4 1651 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 TERF1P54274 439 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
CD46-206ENST00000360212 INSRP06213 1382 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.715e-9■■■□□ 14.8
CD46-206ENST00000360212 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 TMEM63CQ9P1W3 806 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 NESP48681 1621 aa10.64□□□□□ -0.71
CD46-206ENST00000360212 TRIM27P14373 513 aa10.63□□□□□ -0.71
CD46-206ENST00000360212 RBM25P49756 843 aaKnown RBP10.63□□□□□ -0.71
CD46-206ENST00000360212 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
CD46-206ENST00000360212 SNX21Q969T3 373 aa10.63□□□□□ -0.71
CD46-206ENST00000360212 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
CD46-206ENST00000360212 APBB1O00213 710 aa10.63□□□□□ -0.71
CD46-206ENST00000360212 SENP3Q9H4L4 574 aaPredicted RBP10.63□□□□□ -0.71
CD46-206ENST00000360212 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
CD46-206ENST00000360212 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
CD46-206ENST00000360212 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
CD46-206ENST00000360212 CCDC39Q9UFE4 941 aa10.62□□□□□ -0.71
CD46-206ENST00000360212 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
CD46-206ENST00000360212 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
CD46-206ENST00000360212 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 ZNF445P59923 1031 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
CD46-206ENST00000360212 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
CD46-206ENST00000360212 SAMD9Q5K651 1589 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 TEX2Q8IWB9 1127 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 PDLIM2Q96JY6 352 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 GTPBP4Q9BZE4 634 aaKnown RBP10.61□□□□□ -0.71
CD46-206ENST00000360212 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
CD46-206ENST00000360212 LETM1O95202 739 aaPredicted RBP10.61□□□□□ -0.71
CD46-206ENST00000360212 NCOA3Q9Y6Q9 1424 aa10.6□□□□□ -0.71
CD46-206ENST00000360212 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
CD46-206ENST00000360212 SSH1Q8WYL5 1049 aa10.6□□□□□ -0.71
CD46-206ENST00000360212 TRERF1Q96PN7 1200 aa10.6□□□□□ -0.71
CD46-206ENST00000360212 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
CD46-206ENST00000360212 MYRIPQ8NFW9 859 aa10.6□□□□□ -0.71
CD46-206ENST00000360212 U2AF1L5P0DN76 240 aaPredicted RBP10.59□□□□□ -0.71
CD46-206ENST00000360212 U2AF1Q01081 240 aaKnown RBP eCLIP10.59□□□□□ -0.716e-10■■■□□ 18.8
CD46-206ENST00000360212 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 USP25Q9UHP3 1055 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 PTMSP20962 102 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 CERS3Q8IU89 383 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 BCL2L12Q9HB09 334 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 DTNBO60941 627 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 HS1BP3Q53T59 392 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 MORC1Q86VD1 984 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
CD46-206ENST00000360212 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
CD46-206ENST00000360212 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
CD46-206ENST00000360212 NOLC1Q14978 699 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■□□ 18.1
CD46-206ENST00000360212 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms