RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
MACF1-202ENST00000360115 TBC1D2Q9BYX2 928 aa17.06■□□□□ 0.32
MACF1-202ENST00000360115 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
MACF1-202ENST00000360115 CHD1O14646 1710 aa17.06■□□□□ 0.32
MACF1-202ENST00000360115 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
MACF1-202ENST00000360115 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
MACF1-202ENST00000360115 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
MACF1-202ENST00000360115 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
MACF1-202ENST00000360115 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
MACF1-202ENST00000360115 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
MACF1-202ENST00000360115 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
MACF1-202ENST00000360115 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
MACF1-202ENST00000360115 RLBP1P12271 317 aa17.04■□□□□ 0.32
MACF1-202ENST00000360115 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
MACF1-202ENST00000360115 KIF1BO60333 1816 aa17.04■□□□□ 0.32
MACF1-202ENST00000360115 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
MACF1-202ENST00000360115 INO80Q9ULG1 1556 aaPredicted RBP17.03■□□□□ 0.32
MACF1-202ENST00000360115 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
MACF1-202ENST00000360115 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
MACF1-202ENST00000360115 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.31
MACF1-202ENST00000360115 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
MACF1-202ENST00000360115 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
MACF1-202ENST00000360115 ADGRF5Q8IZF2 1346 aa17.01■□□□□ 0.31
MACF1-202ENST00000360115 FSD2A1L4K1 749 aa17.01■□□□□ 0.31
MACF1-202ENST00000360115 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
MACF1-202ENST00000360115 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
MACF1-202ENST00000360115 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
MACF1-202ENST00000360115 ATP7AQ04656 1500 aa17■□□□□ 0.31
MACF1-202ENST00000360115 MORC1Q86VD1 984 aa17■□□□□ 0.31
MACF1-202ENST00000360115 MROH2AA6NES4 1674 aa17■□□□□ 0.31
MACF1-202ENST00000360115 TNNQ9UQP3 1299 aa17■□□□□ 0.31
MACF1-202ENST00000360115 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
MACF1-202ENST00000360115 MCM4P33991 863 aa16.99■□□□□ 0.31
MACF1-202ENST00000360115 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
MACF1-202ENST00000360115 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
MACF1-202ENST00000360115 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
MACF1-202ENST00000360115 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
MACF1-202ENST00000360115 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
MACF1-202ENST00000360115 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
MACF1-202ENST00000360115 MYH16Q9H6N6 1097 aa16.98■□□□□ 0.31
MACF1-202ENST00000360115 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
MACF1-202ENST00000360115 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
MACF1-202ENST00000360115 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
MACF1-202ENST00000360115 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
MACF1-202ENST00000360115 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
MACF1-202ENST00000360115 XRCC6P12956 609 aaKnown RBP eCLIP16.96■□□□□ 0.3
MACF1-202ENST00000360115 ADGRB3O60242 1522 aa16.95■□□□□ 0.3
MACF1-202ENST00000360115 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
MACF1-202ENST00000360115 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
MACF1-202ENST00000360115 C22orf23Q9BZE7 217 aa16.95■□□□□ 0.3
MACF1-202ENST00000360115 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
MACF1-202ENST00000360115 ABCA9Q8IUA7 1624 aa16.93■□□□□ 0.3
MACF1-202ENST00000360115 FANCAO15360 1455 aa16.93■□□□□ 0.3
MACF1-202ENST00000360115 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
MACF1-202ENST00000360115 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
MACF1-202ENST00000360115 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
MACF1-202ENST00000360115 NSD2O96028 1365 aa16.92■□□□□ 0.3
MACF1-202ENST00000360115 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
MACF1-202ENST00000360115 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
MACF1-202ENST00000360115 MTHFSP49914 203 aa16.92■□□□□ 0.3
MACF1-202ENST00000360115 ADGRB1O14514 1584 aa16.91■□□□□ 0.3
MACF1-202ENST00000360115 KIF3BO15066 747 aa16.91■□□□□ 0.3
MACF1-202ENST00000360115 NOS1P29475 1434 aa16.91■□□□□ 0.3
MACF1-202ENST00000360115 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
MACF1-202ENST00000360115 TRAK2O60296 914 aa16.9■□□□□ 0.3
MACF1-202ENST00000360115 CLCN1P35523 988 aa16.9■□□□□ 0.3
MACF1-202ENST00000360115 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
MACF1-202ENST00000360115 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
MACF1-202ENST00000360115 ISY1Q9ULR0 285 aaKnown RBP16.9■□□□□ 0.3
MACF1-202ENST00000360115 PPLO60437 1756 aa16.89■□□□□ 0.29
MACF1-202ENST00000360115 MRE11P49959 708 aa16.89■□□□□ 0.29
MACF1-202ENST00000360115 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
MACF1-202ENST00000360115 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.29
MACF1-202ENST00000360115 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
MACF1-202ENST00000360115 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
MACF1-202ENST00000360115 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
MACF1-202ENST00000360115 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
MACF1-202ENST00000360115 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
MACF1-202ENST00000360115 DDX19BQ9UMR2 479 aa16.88■□□□□ 0.29
MACF1-202ENST00000360115 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
MACF1-202ENST00000360115 DDIT3P35638 169 aa16.87■□□□□ 0.29
MACF1-202ENST00000360115 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
MACF1-202ENST00000360115 ANKRD36BQ8N2N9 1353 aa16.86■□□□□ 0.29
MACF1-202ENST00000360115 GZF1Q9H116 711 aaPredicted RBP16.86■□□□□ 0.29
MACF1-202ENST00000360115 TRIM27P14373 513 aa16.85■□□□□ 0.29
MACF1-202ENST00000360115 SNX21Q969T3 373 aa16.85■□□□□ 0.29
MACF1-202ENST00000360115 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
MACF1-202ENST00000360115 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
MACF1-202ENST00000360115 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
MACF1-202ENST00000360115 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
MACF1-202ENST00000360115 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
MACF1-202ENST00000360115 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
MACF1-202ENST00000360115 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
MACF1-202ENST00000360115 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.29
MACF1-202ENST00000360115 ARXQ96QS3 562 aa16.83■□□□□ 0.29
MACF1-202ENST00000360115 CIZ1Q9ULV3 898 aaPredicted RBP16.83■□□□□ 0.28
MACF1-202ENST00000360115 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
MACF1-202ENST00000360115 IL16Q14005 1332 aa16.83■□□□□ 0.28
MACF1-202ENST00000360115 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
MACF1-202ENST00000360115 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms