RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.24
SPTSSB-201ENST00000359175 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SPTSSB-201ENST00000359175 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
SPTSSB-201ENST00000359175 CCDC146Q8IYE0 955 aa16.57■□□□□ 0.24
SPTSSB-201ENST00000359175 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
SPTSSB-201ENST00000359175 NUP155O75694 1391 aa16.56■□□□□ 0.24
SPTSSB-201ENST00000359175 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
SPTSSB-201ENST00000359175 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
SPTSSB-201ENST00000359175 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
SPTSSB-201ENST00000359175 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
SPTSSB-201ENST00000359175 MYRIPQ8NFW9 859 aa16.55■□□□□ 0.24
SPTSSB-201ENST00000359175 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
SPTSSB-201ENST00000359175 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
SPTSSB-201ENST00000359175 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
SPTSSB-201ENST00000359175 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
SPTSSB-201ENST00000359175 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
SPTSSB-201ENST00000359175 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
SPTSSB-201ENST00000359175 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
SPTSSB-201ENST00000359175 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
SPTSSB-201ENST00000359175 RLBP1P12271 317 aa16.53■□□□□ 0.24
SPTSSB-201ENST00000359175 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
SPTSSB-201ENST00000359175 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
SPTSSB-201ENST00000359175 BAG4O95429 457 aaKnown RBP16.52■□□□□ 0.24
SPTSSB-201ENST00000359175 ZSCAN23Q3MJ62 389 aa16.52■□□□□ 0.24
SPTSSB-201ENST00000359175 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
SPTSSB-201ENST00000359175 SSFA2P28290 1259 aa16.52■□□□□ 0.23
SPTSSB-201ENST00000359175 CBX1P83916 185 aa16.52■□□□□ 0.23
SPTSSB-201ENST00000359175 PTPRGP23470 1445 aa16.52■□□□□ 0.23
SPTSSB-201ENST00000359175 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPTSSB-201ENST00000359175 PRIMPOLQ96LW4 560 aa16.5■□□□□ 0.23
SPTSSB-201ENST00000359175 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
SPTSSB-201ENST00000359175 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
SPTSSB-201ENST00000359175 ATP2B3Q16720 1220 aa16.5■□□□□ 0.23
SPTSSB-201ENST00000359175 EIF2AK4Q9P2K8 1649 aaKnown RBP16.49■□□□□ 0.23
SPTSSB-201ENST00000359175 K7ELQ4 463 aaPredicted RBP16.49■□□□□ 0.23
SPTSSB-201ENST00000359175 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 KIF2CQ99661 725 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 SYNMO15061 1565 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 VGLL3A8MV65 326 aa16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 CAVIN1Q6NZI2 390 aaKnown RBP16.48■□□□□ 0.23
SPTSSB-201ENST00000359175 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
SPTSSB-201ENST00000359175 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
SPTSSB-201ENST00000359175 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
SPTSSB-201ENST00000359175 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
SPTSSB-201ENST00000359175 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
SPTSSB-201ENST00000359175 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 NUP160Q12769 1436 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 A2MP01023 1474 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
SPTSSB-201ENST00000359175 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
SPTSSB-201ENST00000359175 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 MCTP1Q6DN14 999 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
SPTSSB-201ENST00000359175 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
SPTSSB-201ENST00000359175 TSC1Q92574 1164 aa16.42■□□□□ 0.22
SPTSSB-201ENST00000359175 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
SPTSSB-201ENST00000359175 NUCB2P80303 420 aa16.41■□□□□ 0.22
SPTSSB-201ENST00000359175 CYP2E1P05181 493 aaPredicted RBP16.41■□□□□ 0.22
SPTSSB-201ENST00000359175 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
SPTSSB-201ENST00000359175 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
SPTSSB-201ENST00000359175 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
SPTSSB-201ENST00000359175 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SPTSSB-201ENST00000359175 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
SPTSSB-201ENST00000359175 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
SPTSSB-201ENST00000359175 DNTTIP2Q5QJE6 756 aaKnown RBP16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 KANK1Q14678 1352 aa16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
SPTSSB-201ENST00000359175 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 WDR63Q8IWG1 891 aa16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
SPTSSB-201ENST00000359175 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
SPTSSB-201ENST00000359175 DZIP1LQ8IYY4 767 aaKnown RBP16.37■□□□□ 0.21
SPTSSB-201ENST00000359175 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
SPTSSB-201ENST00000359175 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
SPTSSB-201ENST00000359175 MYOM1P52179 1685 aa16.37■□□□□ 0.21
SPTSSB-201ENST00000359175 RGL3Q3MIN7 710 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms