RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
NUP98-203ENST00000359171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
NUP98-203ENST00000359171 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
NUP98-203ENST00000359171 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
NUP98-203ENST00000359171 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
NUP98-203ENST00000359171 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
NUP98-203ENST00000359171 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
NUP98-203ENST00000359171 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
NUP98-203ENST00000359171 PDCP20941 246 aa17.48■□□□□ 0.39
NUP98-203ENST00000359171 RABEP1Q15276 862 aa17.48■□□□□ 0.39
NUP98-203ENST00000359171 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
NUP98-203ENST00000359171 PKNOX2Q96KN3 472 aa17.48■□□□□ 0.39
NUP98-203ENST00000359171 PDILTQ8N807 584 aa17.48■□□□□ 0.39
NUP98-203ENST00000359171 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
NUP98-203ENST00000359171 OFD1O75665 1012 aa17.47■□□□□ 0.39
NUP98-203ENST00000359171 MYO6Q9UM54 1294 aa17.47■□□□□ 0.39
NUP98-203ENST00000359171 CT47A1Q5JQC4 288 aaPredicted RBP17.47■□□□□ 0.39
NUP98-203ENST00000359171 LEKR1Q6ZMV7 388 aa17.47■□□□□ 0.39
NUP98-203ENST00000359171 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
NUP98-203ENST00000359171 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
NUP98-203ENST00000359171 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
NUP98-203ENST00000359171 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
NUP98-203ENST00000359171 CNTLNQ9NXG0 1405 aa17.46■□□□□ 0.39
NUP98-203ENST00000359171 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
NUP98-203ENST00000359171 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
NUP98-203ENST00000359171 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
NUP98-203ENST00000359171 PANK1Q8TE04 598 aa17.46■□□□□ 0.39
NUP98-203ENST00000359171 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
NUP98-203ENST00000359171 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
NUP98-203ENST00000359171 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
NUP98-203ENST00000359171 XBP1P17861 261 aa17.44■□□□□ 0.38
NUP98-203ENST00000359171 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
NUP98-203ENST00000359171 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
NUP98-203ENST00000359171 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
NUP98-203ENST00000359171 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
NUP98-203ENST00000359171 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
NUP98-203ENST00000359171 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
NUP98-203ENST00000359171 CNTROBQ8N137 903 aa17.42■□□□□ 0.38
NUP98-203ENST00000359171 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
NUP98-203ENST00000359171 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
NUP98-203ENST00000359171 SMC2O95347 1197 aa17.42■□□□□ 0.38
NUP98-203ENST00000359171 ODF2Q5BJF6 829 aa17.42■□□□□ 0.38
NUP98-203ENST00000359171 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
NUP98-203ENST00000359171 CTDP1Q9Y5B0 961 aaPredicted RBP17.42■□□□□ 0.38
NUP98-203ENST00000359171 NEK4P51957 841 aa17.41■□□□□ 0.38
NUP98-203ENST00000359171 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
NUP98-203ENST00000359171 FOSBP53539 338 aa17.41■□□□□ 0.38
NUP98-203ENST00000359171 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
NUP98-203ENST00000359171 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
NUP98-203ENST00000359171 GNAI3P08754 354 aa17.4■□□□□ 0.38
NUP98-203ENST00000359171 CCDC112Q8NEF3 446 aa17.4■□□□□ 0.38
NUP98-203ENST00000359171 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
NUP98-203ENST00000359171 RAD21O60216 631 aa17.4■□□□□ 0.38
NUP98-203ENST00000359171 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
NUP98-203ENST00000359171 PDE3AQ14432 1141 aa17.39■□□□□ 0.38
NUP98-203ENST00000359171 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.38
NUP98-203ENST00000359171 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.38
NUP98-203ENST00000359171 EPS15P42566 896 aa17.39■□□□□ 0.37
NUP98-203ENST00000359171 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
NUP98-203ENST00000359171 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
NUP98-203ENST00000359171 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
NUP98-203ENST00000359171 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
NUP98-203ENST00000359171 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
NUP98-203ENST00000359171 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
NUP98-203ENST00000359171 HIP1O00291 1037 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 RRP9O43818 475 aaKnown RBP17.38■□□□□ 0.37
NUP98-203ENST00000359171 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
NUP98-203ENST00000359171 ERLIN1O75477 346 aa17.37■□□□□ 0.37
NUP98-203ENST00000359171 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
NUP98-203ENST00000359171 FIBPO43427 364 aa17.36■□□□□ 0.37
NUP98-203ENST00000359171 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
NUP98-203ENST00000359171 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
NUP98-203ENST00000359171 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
NUP98-203ENST00000359171 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
NUP98-203ENST00000359171 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
NUP98-203ENST00000359171 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
NUP98-203ENST00000359171 BACH2Q9BYV9 841 aa17.36■□□□□ 0.37
NUP98-203ENST00000359171 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
NUP98-203ENST00000359171 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
NUP98-203ENST00000359171 STK38Q15208 465 aa17.35■□□□□ 0.37
NUP98-203ENST00000359171 EIF3JO75822 258 aaKnown RBP17.35■□□□□ 0.37
NUP98-203ENST00000359171 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
NUP98-203ENST00000359171 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
NUP98-203ENST00000359171 KIAA0754O94854 1291 aa17.35■□□□□ 0.37
NUP98-203ENST00000359171 ESPNB1AK53 854 aa17.34■□□□□ 0.37
NUP98-203ENST00000359171 MAGEC2Q9UBF1 373 aaPredicted RBP17.34■□□□□ 0.37
NUP98-203ENST00000359171 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
NUP98-203ENST00000359171 GOLGA6L7A0A1B0GV03 622 aa17.33■□□□□ 0.37
NUP98-203ENST00000359171 USP8P40818 1118 aa17.33■□□□□ 0.37
NUP98-203ENST00000359171 ZNHIT6Q9NWK9 470 aaKnown RBP17.33■□□□□ 0.37
NUP98-203ENST00000359171 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.36
NUP98-203ENST00000359171 ERLIN2O94905 339 aa17.33■□□□□ 0.36
NUP98-203ENST00000359171 TXLNAP40222 546 aa17.32■□□□□ 0.36
NUP98-203ENST00000359171 GOLGA6L10A6NI86 522 aa17.32■□□□□ 0.36
NUP98-203ENST00000359171 RIC3Q7Z5B4 369 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms