RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-201ENST00000359005 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
TRAPPC4-201ENST00000359005 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-201ENST00000359005 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
TRAPPC4-201ENST00000359005 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
TRAPPC4-201ENST00000359005 STK26Q9P289 416 aa14.86□□□□□ -0.03
TRAPPC4-201ENST00000359005 MST1RQ04912 1400 aa14.85□□□□□ -0.03
TRAPPC4-201ENST00000359005 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
TRAPPC4-201ENST00000359005 XRN1Q8IZH2 1706 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-201ENST00000359005 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
TRAPPC4-201ENST00000359005 WASHC2AQ641Q2 1341 aa14.84□□□□□ -0.03
TRAPPC4-201ENST00000359005 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.83□□□□□ -0.03
TRAPPC4-201ENST00000359005 ORAI2Q96SN7 254 aa14.83□□□□□ -0.04
TRAPPC4-201ENST00000359005 IFT172Q9UG01 1749 aa14.83□□□□□ -0.04
TRAPPC4-201ENST00000359005 ADGRL3Q9HAR2 1447 aa14.83□□□□□ -0.04
TRAPPC4-201ENST00000359005 CCER2I3L3R5 266 aa14.82□□□□□ -0.04
TRAPPC4-201ENST00000359005 CFAP70Q5T0N1 1121 aa14.82□□□□□ -0.04
TRAPPC4-201ENST00000359005 JCADQ9P266 1359 aa14.82□□□□□ -0.04
TRAPPC4-201ENST00000359005 PLEKHH1Q9ULM0 1364 aa14.82□□□□□ -0.04
TRAPPC4-201ENST00000359005 C14orf93Q9H972 538 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-201ENST00000359005 DCCP43146 1447 aa14.81□□□□□ -0.04
TRAPPC4-201ENST00000359005 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
TRAPPC4-201ENST00000359005 TMF1P82094 1093 aa14.8□□□□□ -0.04
TRAPPC4-201ENST00000359005 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
TRAPPC4-201ENST00000359005 NRXN1Q9ULB1 1477 aa14.8□□□□□ -0.04
TRAPPC4-201ENST00000359005 PPLO60437 1756 aa14.79□□□□□ -0.04
TRAPPC4-201ENST00000359005 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
TRAPPC4-201ENST00000359005 C1orf167Q5SNV9 1468 aa14.78□□□□□ -0.04
TRAPPC4-201ENST00000359005 PIK3C2GO75747 1445 aa14.78□□□□□ -0.04
TRAPPC4-201ENST00000359005 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-201ENST00000359005 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-201ENST00000359005 LRP6O75581 1613 aa14.77□□□□□ -0.04
TRAPPC4-201ENST00000359005 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC4-201ENST00000359005 ASXL1Q8IXJ9 1541 aa14.77□□□□□ -0.04
TRAPPC4-201ENST00000359005 ABCC11Q96J66 1382 aa14.77□□□□□ -0.04
TRAPPC4-201ENST00000359005 NUTM2FA1L443 756 aa14.77□□□□□ -0.05
TRAPPC4-201ENST00000359005 NUTM2BA6NNL0 878 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-201ENST00000359005 NUTM2EB1AL46 878 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-201ENST00000359005 NBPF1Q3BBV0 1214 aa14.76□□□□□ -0.05
TRAPPC4-201ENST00000359005 NUTM2AQ8IVF1 878 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-201ENST00000359005 AHDC1Q5TGY3 1603 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC4-201ENST00000359005 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-201ENST00000359005 TECPR2O15040 1411 aa14.74□□□□□ -0.05
TRAPPC4-201ENST00000359005 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 PHLPP1O60346 1717 aa14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 ESCO1Q5FWF5 840 aa14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 YTHDC2Q9H6S0 1430 aaKnown RBP14.73□□□□□ -0.05
TRAPPC4-201ENST00000359005 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-201ENST00000359005 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-201ENST00000359005 SAFB2Q14151 953 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAPPC4-201ENST00000359005 FOXO3O43524 673 aa14.71□□□□□ -0.05
TRAPPC4-201ENST00000359005 SIRT1Q96EB6 747 aa14.71□□□□□ -0.05
TRAPPC4-201ENST00000359005 PRAM1Q96QH2 718 aa14.71□□□□□ -0.05
TRAPPC4-201ENST00000359005 NALCNQ8IZF0 1738 aa14.71□□□□□ -0.05
TRAPPC4-201ENST00000359005 C11orf95C9JLR9 678 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC4-201ENST00000359005 PNPLA6Q8IY17 1366 aa14.7□□□□□ -0.06
TRAPPC4-201ENST00000359005 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
TRAPPC4-201ENST00000359005 SBNO2Q9Y2G9 1366 aa14.69□□□□□ -0.06
TRAPPC4-201ENST00000359005 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
TRAPPC4-201ENST00000359005 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
TRAPPC4-201ENST00000359005 TESK2Q96S53 571 aa14.67□□□□□ -0.06
TRAPPC4-201ENST00000359005 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-201ENST00000359005 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
TRAPPC4-201ENST00000359005 AFF2P51816 1311 aa14.65□□□□□ -0.06
TRAPPC4-201ENST00000359005 RALBP1Q15311 655 aa14.64□□□□□ -0.07
TRAPPC4-201ENST00000359005 C8orf37Q96NL8 207 aa14.64□□□□□ -0.07
TRAPPC4-201ENST00000359005 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
TRAPPC4-201ENST00000359005 PRKRIP1Q9H875 184 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC4-201ENST00000359005 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC4-201ENST00000359005 POGKQ9P215 609 aa14.63□□□□□ -0.07
TRAPPC4-201ENST00000359005 ADGRB1O14514 1584 aa14.63□□□□□ -0.07
TRAPPC4-201ENST00000359005 NPHP3Q7Z494 1330 aa14.63□□□□□ -0.07
TRAPPC4-201ENST00000359005 NHSL1Q5SYE7 1610 aa14.63□□□□□ -0.07
TRAPPC4-201ENST00000359005 PXDNQ92626 1479 aa14.62□□□□□ -0.07
TRAPPC4-201ENST00000359005 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC4-201ENST00000359005 CDC42BPGQ6DT37 1551 aa14.61□□□□□ -0.07
TRAPPC4-201ENST00000359005 KRT28Q7Z3Y7 464 aa14.61□□□□□ -0.07
TRAPPC4-201ENST00000359005 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
TRAPPC4-201ENST00000359005 PMFBP1Q8TBY8 1022 aa14.6□□□□□ -0.07
TRAPPC4-201ENST00000359005 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
TRAPPC4-201ENST00000359005 QTRT2Q9H974 415 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-201ENST00000359005 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
TRAPPC4-201ENST00000359005 SHPRHQ149N8 1683 aa14.6□□□□□ -0.07
TRAPPC4-201ENST00000359005 RXRBP28702 533 aa14.59□□□□□ -0.07
TRAPPC4-201ENST00000359005 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
TRAPPC4-201ENST00000359005 FNBP4Q8N3X1 1017 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-201ENST00000359005 CABLES1Q8TDN4 633 aa14.58□□□□□ -0.08
TRAPPC4-201ENST00000359005 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
TRAPPC4-201ENST00000359005 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.08
TRAPPC4-201ENST00000359005 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
TRAPPC4-201ENST00000359005 WASLO00401 505 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-201ENST00000359005 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
TRAPPC4-201ENST00000359005 NINLQ9Y2I6 1382 aa14.56□□□□□ -0.08
TRAPPC4-201ENST00000359005 DLC1Q96QB1 1528 aa14.56□□□□□ -0.08
TRAPPC4-201ENST00000359005 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
TRAPPC4-201ENST00000359005 ARHGEF28Q8N1W1 1705 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-201ENST00000359005 PANK3Q9H999 370 aa14.54□□□□□ -0.08
TRAPPC4-201ENST00000359005 USP21Q9UK80 565 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms