RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 RUFY1Q96T51 708 aa24.59■■□□□ 1.53
EDC4-201ENST00000358933 SPC24Q8NBT2 197 aa24.59■■□□□ 1.53
EDC4-201ENST00000358933 CPLX1O14810 134 aa24.59■■□□□ 1.53
EDC4-201ENST00000358933 APPP05067 770 aa24.58■■□□□ 1.53
EDC4-201ENST00000358933 WDR97A6NE52 1622 aa24.58■■□□□ 1.52
EDC4-201ENST00000358933 SDF4Q9BRK5 362 aa24.58■■□□□ 1.52
EDC4-201ENST00000358933 MPNDQ8N594 471 aa24.57■■□□□ 1.52
EDC4-201ENST00000358933 ERCC4Q92889 916 aaPredicted RBP24.57■■□□□ 1.52
EDC4-201ENST00000358933 CEP89Q96ST8 783 aa24.57■■□□□ 1.52
EDC4-201ENST00000358933 FIBPO43427 364 aa24.56■■□□□ 1.52
EDC4-201ENST00000358933 LEKR1Q6ZMV7 388 aa24.56■■□□□ 1.52
EDC4-201ENST00000358933 PDCL2Q8N4E4 241 aa24.56■■□□□ 1.52
EDC4-201ENST00000358933 TRIM29Q14134 588 aa24.56■■□□□ 1.52
EDC4-201ENST00000358933 NUTM2DQ5VT03 806 aaPredicted RBP24.56■■□□□ 1.52
EDC4-201ENST00000358933 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
EDC4-201ENST00000358933 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
EDC4-201ENST00000358933 ZNF330Q9Y3S2 320 aaPredicted RBP24.55■■□□□ 1.52
EDC4-201ENST00000358933 CCDC192P0DO97 292 aa24.55■■□□□ 1.52
EDC4-201ENST00000358933 CCP110O43303 1012 aa24.55■■□□□ 1.52
EDC4-201ENST00000358933 H0YHG0 523 aa24.55■■□□□ 1.52
EDC4-201ENST00000358933 STAC3Q96MF2 364 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 COG3Q96JB2 828 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 CUX1P39880 1505 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 PDCP20941 246 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 NBPF8Q3BBV2 869 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 HSP90AB4PQ58FF6 505 aa24.54■■□□□ 1.52
EDC4-201ENST00000358933 PATL2C9JE40 543 aaKnown RBP24.53■■□□□ 1.52
EDC4-201ENST00000358933 ERC2O15083 957 aa24.53■■□□□ 1.52
EDC4-201ENST00000358933 AKAP17AQ02040 695 aaKnown RBP24.53■■□□□ 1.52
EDC4-201ENST00000358933 LRRFIP1Q32MZ4 808 aaKnown RBP24.53■■□□□ 1.52
EDC4-201ENST00000358933 FKBP5Q13451 457 aaPredicted RBP24.53■■□□□ 1.52
EDC4-201ENST00000358933 SYNE3Q6ZMZ3 975 aa24.52■■□□□ 1.52
EDC4-201ENST00000358933 C9orf78Q9NZ63 289 aaPredicted RBP24.52■■□□□ 1.52
EDC4-201ENST00000358933 WDR33Q9C0J8 1336 aaKnown RBP24.51■■□□□ 1.51
EDC4-201ENST00000358933 PDE4CQ08493 712 aa24.51■■□□□ 1.51
EDC4-201ENST00000358933 CDR1P51861 262 aa24.5■■□□□ 1.51
EDC4-201ENST00000358933 MLECQ14165 292 aa24.5■■□□□ 1.51
EDC4-201ENST00000358933 EXOSC9Q06265 439 aaKnown RBP24.5■■□□□ 1.51
EDC4-201ENST00000358933 KINO60870 393 aaKnown RBP24.5■■□□□ 1.51
EDC4-201ENST00000358933 PCMTD1Q96MG8 357 aaPredicted RBP24.5■■□□□ 1.51
EDC4-201ENST00000358933 MVPQ14764 893 aaKnown RBP24.48■■□□□ 1.51
EDC4-201ENST00000358933 PSMA5P28066 241 aa24.48■■□□□ 1.51
EDC4-201ENST00000358933 RDXP35241 583 aaKnown RBP24.48■■□□□ 1.51
EDC4-201ENST00000358933 CALRP27797 417 aaKnown RBP24.48■■□□□ 1.51
EDC4-201ENST00000358933 DHX8Q14562 1220 aaKnown RBP24.48■■□□□ 1.51
EDC4-201ENST00000358933 CCDC9Q9Y3X0 531 aaKnown RBP24.48■■□□□ 1.51
EDC4-201ENST00000358933 OLFM4Q6UX06 510 aa24.47■■□□□ 1.51
EDC4-201ENST00000358933 PRDM10Q9NQV6 1147 aa24.47■■□□□ 1.51
EDC4-201ENST00000358933 VGFO15240 615 aaPredicted RBP24.47■■□□□ 1.51
EDC4-201ENST00000358933 MTHFSP49914 203 aa24.47■■□□□ 1.51
EDC4-201ENST00000358933 PDILTQ8N807 584 aa24.47■■□□□ 1.51
EDC4-201ENST00000358933 SMC2O95347 1197 aa24.47■■□□□ 1.51
EDC4-201ENST00000358933 C11orf95C9JLR9 678 aaPredicted RBP24.46■■□□□ 1.51
EDC4-201ENST00000358933 CLCN1P35523 988 aa24.46■■□□□ 1.51
EDC4-201ENST00000358933 LTV1Q96GA3 475 aaPredicted RBP24.46■■□□□ 1.51
EDC4-201ENST00000358933 NGDNQ8NEJ9 315 aaKnown RBP24.46■■□□□ 1.51
EDC4-201ENST00000358933 IGF1RP08069 1367 aa24.45■■□□□ 1.5
EDC4-201ENST00000358933 CT47B1P0C2W7 299 aaPredicted RBP24.45■■□□□ 1.5
EDC4-201ENST00000358933 CBX1P83916 185 aa24.45■■□□□ 1.5
EDC4-201ENST00000358933 G3BP1Q13283 466 aaKnown RBP eCLIP24.45■■□□□ 1.55e-7■■□□□ 12.4
EDC4-201ENST00000358933 CSB-PGBD3P0DP91 1061 aa24.44■■□□□ 1.5
EDC4-201ENST00000358933 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
EDC4-201ENST00000358933 XPCQ01831 940 aaPredicted RBP24.44■■□□□ 1.5
EDC4-201ENST00000358933 CHD1LQ86WJ1 897 aa24.44■■□□□ 1.5
EDC4-201ENST00000358933 FOSBP53539 338 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 NEXNQ0ZGT2 675 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 SKAP1Q86WV1 359 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 CCDC47Q96A33 483 aaKnown RBP24.43■■□□□ 1.5
EDC4-201ENST00000358933 SYCE3A1L190 88 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 TBC1D2Q9BYX2 928 aa24.43■■□□□ 1.5
EDC4-201ENST00000358933 NOB1Q9ULX3 412 aaKnown RBP24.43■■□□□ 1.5
EDC4-201ENST00000358933 ATF7IPQ6VMQ6 1270 aa24.42■■□□□ 1.5
EDC4-201ENST00000358933 ZNF644Q9H582 1327 aaPredicted RBP24.42■■□□□ 1.5
EDC4-201ENST00000358933 TRDNQ13061 729 aa24.42■■□□□ 1.5
EDC4-201ENST00000358933 EIF2S2P20042 333 aaKnown RBP24.41■■□□□ 1.5
EDC4-201ENST00000358933 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 TNMDQ9H2S6 317 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 MARCH6O60337 910 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 FMNL2Q96PY5 1086 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 ANKRD50Q9ULJ7 1429 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 C1orf115Q9H7X2 142 aa24.41■■□□□ 1.5
EDC4-201ENST00000358933 TEFQ10587 303 aa24.4■■□□□ 1.5
EDC4-201ENST00000358933 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
EDC4-201ENST00000358933 NECTIN2Q92692 538 aa24.4■■□□□ 1.5
EDC4-201ENST00000358933 MINK1Q8N4C8 1332 aaPredicted RBP24.4■■□□□ 1.5
EDC4-201ENST00000358933 AEBP1Q8IUX7 1158 aa24.4■■□□□ 1.5
EDC4-201ENST00000358933 ERICH4A6NGS2 130 aa24.39■■□□□ 1.5
EDC4-201ENST00000358933 KRT85P78386 507 aa24.39■■□□□ 1.5
EDC4-201ENST00000358933 SLFN5Q08AF3 891 aa24.39■■□□□ 1.5
EDC4-201ENST00000358933 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
EDC4-201ENST00000358933 GNAI3P08754 354 aa24.38■■□□□ 1.49
EDC4-201ENST00000358933 MCM5P33992 734 aa24.38■■□□□ 1.49
EDC4-201ENST00000358933 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
EDC4-201ENST00000358933 HMOX1P09601 288 aa24.38■■□□□ 1.49
EDC4-201ENST00000358933 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
EDC4-201ENST00000358933 SAFBQ15424 915 aaKnown RBP eCLIP24.37■■□□□ 1.49
EDC4-201ENST00000358933 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
EDC4-201ENST00000358933 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms