RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TESK2Q96S53 571 aa19.35■□□□□ 0.69
NIPAL3-203ENST00000358028 METP08581 1390 aa19.35■□□□□ 0.69
NIPAL3-203ENST00000358028 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
NIPAL3-203ENST00000358028 RALBP1Q15311 655 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 TOM1O60784 492 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 KCNA6P17658 529 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
NIPAL3-203ENST00000358028 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
NIPAL3-203ENST00000358028 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.68
NIPAL3-203ENST00000358028 BRD4O60885 1362 aaPredicted RBP19.32■□□□□ 0.68
NIPAL3-203ENST00000358028 KIAA1210Q9ULL0 1709 aa19.32■□□□□ 0.68
NIPAL3-203ENST00000358028 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
NIPAL3-203ENST00000358028 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
NIPAL3-203ENST00000358028 TMF1P82094 1093 aa19.29■□□□□ 0.68
NIPAL3-203ENST00000358028 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
NIPAL3-203ENST00000358028 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
NIPAL3-203ENST00000358028 RBM33Q96EV2 1170 aaKnown RBP19.28■□□□□ 0.68
NIPAL3-203ENST00000358028 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
NIPAL3-203ENST00000358028 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.67
NIPAL3-203ENST00000358028 AMOTL2Q9Y2J4 779 aa19.27■□□□□ 0.67
NIPAL3-203ENST00000358028 LRPPRCP42704 1394 aaKnown RBP19.26■□□□□ 0.67
NIPAL3-203ENST00000358028 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
NIPAL3-203ENST00000358028 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
NIPAL3-203ENST00000358028 HSPA1LP34931 641 aa19.25■□□□□ 0.67
NIPAL3-203ENST00000358028 PROSER2Q86WR7 435 aaPredicted RBP19.24■□□□□ 0.67
NIPAL3-203ENST00000358028 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
NIPAL3-203ENST00000358028 PPP4R2Q9NY27 417 aa19.24■□□□□ 0.67
NIPAL3-203ENST00000358028 NALCNQ8IZF0 1738 aa19.24■□□□□ 0.67
NIPAL3-203ENST00000358028 ADGRB1O14514 1584 aa19.22■□□□□ 0.67
NIPAL3-203ENST00000358028 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
NIPAL3-203ENST00000358028 TMEM132EQ6IEE7 984 aa19.22■□□□□ 0.67
NIPAL3-203ENST00000358028 C14orf93Q9H972 538 aaKnown RBP19.22■□□□□ 0.67
NIPAL3-203ENST00000358028 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
NIPAL3-203ENST00000358028 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.21■□□□□ 0.67
NIPAL3-203ENST00000358028 PTCH1Q13635 1447 aa19.21■□□□□ 0.67
NIPAL3-203ENST00000358028 PANK3Q9H999 370 aa19.21■□□□□ 0.67
NIPAL3-203ENST00000358028 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
NIPAL3-203ENST00000358028 ROBO2Q9HCK4 1378 aa19.2■□□□□ 0.66
NIPAL3-203ENST00000358028 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
NIPAL3-203ENST00000358028 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
NIPAL3-203ENST00000358028 TECPR2O15040 1411 aa19.18■□□□□ 0.66
NIPAL3-203ENST00000358028 STK26Q9P289 416 aa19.17■□□□□ 0.66
NIPAL3-203ENST00000358028 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
NIPAL3-203ENST00000358028 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
NIPAL3-203ENST00000358028 MYOM1P52179 1685 aa19.16■□□□□ 0.66
NIPAL3-203ENST00000358028 CDCA8Q53HL2 280 aa19.16■□□□□ 0.66
NIPAL3-203ENST00000358028 ARHGEF28Q8N1W1 1705 aaKnown RBP19.16■□□□□ 0.66
NIPAL3-203ENST00000358028 MSH6P52701 1360 aa19.15■□□□□ 0.66
NIPAL3-203ENST00000358028 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.66
NIPAL3-203ENST00000358028 ABCC11Q96J66 1382 aa19.14■□□□□ 0.66
NIPAL3-203ENST00000358028 MED1Q15648 1581 aaPredicted RBP19.14■□□□□ 0.65
NIPAL3-203ENST00000358028 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
NIPAL3-203ENST00000358028 ILDR2Q71H61 639 aa19.14■□□□□ 0.65
NIPAL3-203ENST00000358028 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
NIPAL3-203ENST00000358028 ADGRL3Q9HAR2 1447 aa19.13■□□□□ 0.65
NIPAL3-203ENST00000358028 RNF123Q5XPI4 1314 aa19.13■□□□□ 0.65
NIPAL3-203ENST00000358028 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
NIPAL3-203ENST00000358028 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
NIPAL3-203ENST00000358028 INSRP06213 1382 aa19.11■□□□□ 0.65
NIPAL3-203ENST00000358028 ROBO1Q9Y6N7 1651 aa19.1■□□□□ 0.65
NIPAL3-203ENST00000358028 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
NIPAL3-203ENST00000358028 DCCP43146 1447 aa19.09■□□□□ 0.65
NIPAL3-203ENST00000358028 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
NIPAL3-203ENST00000358028 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 TRAK1Q9UPV9 953 aa19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
NIPAL3-203ENST00000358028 ANP32EQ9BTT0 268 aa19.06■□□□□ 0.64
NIPAL3-203ENST00000358028 PRAM1Q96QH2 718 aa19.05■□□□□ 0.64
NIPAL3-203ENST00000358028 FMN2Q9NZ56 1722 aa19.04■□□□□ 0.64
NIPAL3-203ENST00000358028 MST1RQ04912 1400 aa19.04■□□□□ 0.64
NIPAL3-203ENST00000358028 ATF3P18847 181 aa19.04■□□□□ 0.64
NIPAL3-203ENST00000358028 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
NIPAL3-203ENST00000358028 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
NIPAL3-203ENST00000358028 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 SAFB2Q14151 953 aaKnown RBP eCLIP19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 SIRT1Q96EB6 747 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 ADGRB2O60241 1585 aa19.03■□□□□ 0.64
NIPAL3-203ENST00000358028 RGPD8O14715 1765 aaPredicted RBP19.02■□□□□ 0.64
NIPAL3-203ENST00000358028 QRICH2Q9H0J4 1663 aa19.02■□□□□ 0.64
NIPAL3-203ENST00000358028 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
NIPAL3-203ENST00000358028 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
NIPAL3-203ENST00000358028 POGKQ9P215 609 aa19■□□□□ 0.63
NIPAL3-203ENST00000358028 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
NIPAL3-203ENST00000358028 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
NIPAL3-203ENST00000358028 SOCS7O14512 581 aa18.98■□□□□ 0.63
NIPAL3-203ENST00000358028 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
NIPAL3-203ENST00000358028 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
NIPAL3-203ENST00000358028 NHSL1Q5SYE7 1610 aa18.97■□□□□ 0.63
NIPAL3-203ENST00000358028 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
NIPAL3-203ENST00000358028 COL16A1Q07092 1604 aaPredicted RBP18.96■□□□□ 0.63
NIPAL3-203ENST00000358028 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
NIPAL3-203ENST00000358028 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms