RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
GYPC-202ENST00000356887 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
GYPC-202ENST00000356887 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
GYPC-202ENST00000356887 ADGRB1O14514 1584 aa22.99■■□□□ 1.27
GYPC-202ENST00000356887 BCAR3O75815 825 aa22.99■■□□□ 1.27
GYPC-202ENST00000356887 TRAK1Q9UPV9 953 aa22.99■■□□□ 1.27
GYPC-202ENST00000356887 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
GYPC-202ENST00000356887 DDRGK1Q96HY6 314 aa22.98■■□□□ 1.27
GYPC-202ENST00000356887 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
GYPC-202ENST00000356887 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
GYPC-202ENST00000356887 MORC1Q86VD1 984 aa22.96■■□□□ 1.27
GYPC-202ENST00000356887 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
GYPC-202ENST00000356887 SHPRHQ149N8 1683 aa22.96■■□□□ 1.27
GYPC-202ENST00000356887 SLC12A5Q9H2X9 1139 aa22.95■■□□□ 1.26
GYPC-202ENST00000356887 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.26
GYPC-202ENST00000356887 FAM161AQ3B820 660 aa22.94■■□□□ 1.26
GYPC-202ENST00000356887 UBE2Q2Q8WVN8 375 aa22.94■■□□□ 1.26
GYPC-202ENST00000356887 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
GYPC-202ENST00000356887 GGT6Q6P531 493 aa22.94■■□□□ 1.26
GYPC-202ENST00000356887 C8orf34Q49A92 452 aa22.93■■□□□ 1.26
GYPC-202ENST00000356887 REREQ9P2R6 1566 aa22.92■■□□□ 1.26
GYPC-202ENST00000356887 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
GYPC-202ENST00000356887 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
GYPC-202ENST00000356887 TMEM132EQ6IEE7 984 aa22.92■■□□□ 1.26
GYPC-202ENST00000356887 ABCC3O15438 1527 aa22.92■■□□□ 1.26
GYPC-202ENST00000356887 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
GYPC-202ENST00000356887 SIGLEC1Q9BZZ2 1709 aa22.91■■□□□ 1.26
GYPC-202ENST00000356887 RUNDC1Q96C34 613 aa22.91■■□□□ 1.26
GYPC-202ENST00000356887 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
GYPC-202ENST00000356887 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
GYPC-202ENST00000356887 PUS7Q96PZ0 661 aaKnown RBP22.89■■□□□ 1.26
GYPC-202ENST00000356887 NINLQ9Y2I6 1382 aa22.89■■□□□ 1.26
GYPC-202ENST00000356887 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
GYPC-202ENST00000356887 IQSEC2Q5JU85 1478 aa22.88■■□□□ 1.25
GYPC-202ENST00000356887 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
GYPC-202ENST00000356887 TNNT2P45379 298 aaPredicted RBP22.87■■□□□ 1.25
GYPC-202ENST00000356887 IGHDP01880 384 aa22.86■■□□□ 1.25
GYPC-202ENST00000356887 NEFMP07197 916 aa22.86■■□□□ 1.25
GYPC-202ENST00000356887 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
GYPC-202ENST00000356887 RGS3P49796 1198 aa22.85■■□□□ 1.25
GYPC-202ENST00000356887 AGLP35573 1532 aa22.85■■□□□ 1.25
GYPC-202ENST00000356887 TCP11L2Q8N4U5 519 aa22.85■■□□□ 1.25
GYPC-202ENST00000356887 PIK3C2BO00750 1634 aa22.84■■□□□ 1.25
GYPC-202ENST00000356887 MTHFSP49914 203 aa22.84■■□□□ 1.25
GYPC-202ENST00000356887 WDR63Q8IWG1 891 aa22.84■■□□□ 1.25
GYPC-202ENST00000356887 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
GYPC-202ENST00000356887 VGFO15240 615 aaPredicted RBP22.82■■□□□ 1.24
GYPC-202ENST00000356887 RRP7AQ9Y3A4 280 aaKnown RBP22.82■■□□□ 1.24
GYPC-202ENST00000356887 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
GYPC-202ENST00000356887 TULP4Q9NRJ4 1543 aa22.82■■□□□ 1.24
GYPC-202ENST00000356887 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
GYPC-202ENST00000356887 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 CCDC27Q2M243 656 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 PANK1Q8TE04 598 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 CLUAP1Q96AJ1 413 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 ANKRD36BQ8N2N9 1353 aa22.81■■□□□ 1.24
GYPC-202ENST00000356887 RARSP54136 660 aaKnown RBP22.81■■□□□ 1.24
GYPC-202ENST00000356887 NCBP3Q53F19 620 aaKnown RBP22.8■■□□□ 1.24
GYPC-202ENST00000356887 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
GYPC-202ENST00000356887 NSD2O96028 1365 aa22.8■■□□□ 1.24
GYPC-202ENST00000356887 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
GYPC-202ENST00000356887 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
GYPC-202ENST00000356887 ARHGAP31Q2M1Z3 1444 aa22.77■■□□□ 1.24
GYPC-202ENST00000356887 AAMPQ13685 434 aa22.77■■□□□ 1.23
GYPC-202ENST00000356887 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.23
GYPC-202ENST00000356887 SLC4A3P48751 1232 aa22.76■■□□□ 1.23
GYPC-202ENST00000356887 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
GYPC-202ENST00000356887 ZFYVE9O95405 1425 aa22.74■■□□□ 1.23
GYPC-202ENST00000356887 DAXXQ9UER7 740 aaPredicted RBP22.74■■□□□ 1.23
GYPC-202ENST00000356887 CABP2Q9NPB3 220 aa22.73■■□□□ 1.23
GYPC-202ENST00000356887 VIRMAQ69YN4 1812 aaKnown RBP22.73■■□□□ 1.23
GYPC-202ENST00000356887 IDI1Q13907 227 aa22.73■■□□□ 1.23
GYPC-202ENST00000356887 MAPK8IP3Q9UPT6 1336 aa22.73■■□□□ 1.23
GYPC-202ENST00000356887 CLTCQ00610 1675 aaKnown RBP22.73■■□□□ 1.23
GYPC-202ENST00000356887 MLECQ14165 292 aa22.72■■□□□ 1.23
GYPC-202ENST00000356887 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
GYPC-202ENST00000356887 PMFBP1Q8TBY8 1022 aa22.7■■□□□ 1.23
GYPC-202ENST00000356887 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.23
GYPC-202ENST00000356887 U2AF1L5P0DN76 240 aaPredicted RBP22.7■■□□□ 1.22
GYPC-202ENST00000356887 RLBP1P12271 317 aa22.7■■□□□ 1.22
GYPC-202ENST00000356887 U2AF1Q01081 240 aaKnown RBP eCLIP22.7■■□□□ 1.22
GYPC-202ENST00000356887 SLC52A1Q9NWF4 448 aa22.69■■□□□ 1.22
GYPC-202ENST00000356887 ABCC11Q96J66 1382 aa22.69■■□□□ 1.22
GYPC-202ENST00000356887 USP19O94966 1318 aa22.69■■□□□ 1.22
GYPC-202ENST00000356887 NFKBIBQ15653 356 aa22.69■■□□□ 1.22
GYPC-202ENST00000356887 TNNQ9UQP3 1299 aa22.69■■□□□ 1.22
GYPC-202ENST00000356887 PCDHB15Q9Y5E8 787 aa22.68■■□□□ 1.22
GYPC-202ENST00000356887 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
GYPC-202ENST00000356887 PREX1Q8TCU6 1659 aa22.67■■□□□ 1.22
GYPC-202ENST00000356887 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.221e-7■■■□□ 18.5
GYPC-202ENST00000356887 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
GYPC-202ENST00000356887 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
GYPC-202ENST00000356887 STK26Q9P289 416 aa22.64■■□□□ 1.22
GYPC-202ENST00000356887 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.21
GYPC-202ENST00000356887 PTPRMP28827 1452 aa22.63■■□□□ 1.21
GYPC-202ENST00000356887 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
GYPC-202ENST00000356887 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
GYPC-202ENST00000356887 MYO5BQ9ULV0 1848 aa22.63■■□□□ 1.21
GYPC-202ENST00000356887 COL3A1P02461 1466 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms