RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
SND1-201ENST00000354725 PPLO60437 1756 aa14.39□□□□□ -0.11
SND1-201ENST00000354725 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
SND1-201ENST00000354725 TNRQ92752 1358 aa14.39□□□□□ -0.11
SND1-201ENST00000354725 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
SND1-201ENST00000354725 LRPPRCP42704 1394 aaKnown RBP14.37□□□□□ -0.11
SND1-201ENST00000354725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.118e-8■□□□□ 10.3
SND1-201ENST00000354725 USP47Q96K76 1375 aa14.36□□□□□ -0.11
SND1-201ENST00000354725 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
SND1-201ENST00000354725 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
SND1-201ENST00000354725 NRXN3Q9Y4C0 1643 aa14.35□□□□□ -0.11
SND1-201ENST00000354725 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
SND1-201ENST00000354725 MED14O60244 1454 aa14.34□□□□□ -0.11
SND1-201ENST00000354725 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
SND1-201ENST00000354725 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
SND1-201ENST00000354725 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
SND1-201ENST00000354725 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
SND1-201ENST00000354725 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
SND1-201ENST00000354725 RRP9O43818 475 aaKnown RBP14.32□□□□□ -0.12
SND1-201ENST00000354725 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
SND1-201ENST00000354725 PKD2Q13563 968 aa14.32□□□□□ -0.12
SND1-201ENST00000354725 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
SND1-201ENST00000354725 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
SND1-201ENST00000354725 NEFMP07197 916 aa14.3□□□□□ -0.12
SND1-201ENST00000354725 NRXN1Q9ULB1 1477 aa14.3□□□□□ -0.12
SND1-201ENST00000354725 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
SND1-201ENST00000354725 IQGAP1P46940 1657 aa14.29□□□□□ -0.12
SND1-201ENST00000354725 IDI1Q13907 227 aa14.29□□□□□ -0.12
SND1-201ENST00000354725 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
SND1-201ENST00000354725 IPO9Q96P70 1041 aaKnown RBP14.28□□□□□ -0.12
SND1-201ENST00000354725 INSRP06213 1382 aa14.28□□□□□ -0.12
SND1-201ENST00000354725 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
SND1-201ENST00000354725 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
SND1-201ENST00000354725 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.12
SND1-201ENST00000354725 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.12
SND1-201ENST00000354725 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.12
SND1-201ENST00000354725 GPRASP1Q5JY77 1395 aa14.27□□□□□ -0.12
SND1-201ENST00000354725 SETBP1Q9Y6X0 1596 aa14.27□□□□□ -0.12
SND1-201ENST00000354725 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
SND1-201ENST00000354725 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
SND1-201ENST00000354725 PRAG1Q86YV5 1406 aa14.25□□□□□ -0.13
SND1-201ENST00000354725 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
SND1-201ENST00000354725 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
SND1-201ENST00000354725 TMEM2Q9UHN6 1383 aa14.25□□□□□ -0.13
SND1-201ENST00000354725 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
SND1-201ENST00000354725 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
SND1-201ENST00000354725 MYOM2P54296 1465 aa14.23□□□□□ -0.13
SND1-201ENST00000354725 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
SND1-201ENST00000354725 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
SND1-201ENST00000354725 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
SND1-201ENST00000354725 SCAF11Q99590 1463 aaKnown RBP14.22□□□□□ -0.13
SND1-201ENST00000354725 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
SND1-201ENST00000354725 KIAA1210Q9ULL0 1709 aa14.21□□□□□ -0.13
SND1-201ENST00000354725 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
SND1-201ENST00000354725 ANP32AP39687 249 aaKnown RBP14.21□□□□□ -0.13
SND1-201ENST00000354725 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
SND1-201ENST00000354725 ZNF428Q96B54 188 aa14.21□□□□□ -0.13
SND1-201ENST00000354725 XIRP1Q702N8 1843 aaKnown RBP14.21□□□□□ -0.13
SND1-201ENST00000354725 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
SND1-201ENST00000354725 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
SND1-201ENST00000354725 RIMS2Q9UQ26 1411 aa14.19□□□□□ -0.14
SND1-201ENST00000354725 XRN1Q8IZH2 1706 aaKnown RBP14.19□□□□□ -0.14
SND1-201ENST00000354725 GSE1Q14687 1217 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
SND1-201ENST00000354725 LTKP29376 864 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 ADAMTS13Q76LX8 1427 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
SND1-201ENST00000354725 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 KNDC1Q76NI1 1749 aa14.18□□□□□ -0.14
SND1-201ENST00000354725 PLEKHG1Q9ULL1 1385 aa14.17□□□□□ -0.14
SND1-201ENST00000354725 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
SND1-201ENST00000354725 PIK3C2GO75747 1445 aa14.17□□□□□ -0.14
SND1-201ENST00000354725 MYBBP1AQ9BQG0 1328 aaKnown RBP14.16□□□□□ -0.14
SND1-201ENST00000354725 HSPA2P54652 639 aa14.16□□□□□ -0.14
SND1-201ENST00000354725 ALKQ9UM73 1620 aa14.16□□□□□ -0.14
SND1-201ENST00000354725 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
SND1-201ENST00000354725 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
SND1-201ENST00000354725 MYOM1P52179 1685 aa14.15□□□□□ -0.14
SND1-201ENST00000354725 RALBP1Q15311 655 aa14.14□□□□□ -0.15
SND1-201ENST00000354725 ADGRB1O14514 1584 aa14.14□□□□□ -0.15
SND1-201ENST00000354725 NPHP4O75161 1426 aaPredicted RBP14.14□□□□□ -0.15
SND1-201ENST00000354725 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
SND1-201ENST00000354725 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
SND1-201ENST00000354725 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
SND1-201ENST00000354725 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
SND1-201ENST00000354725 RGS3P49796 1198 aa14.11□□□□□ -0.15
SND1-201ENST00000354725 ST20-MTHFSA0A0A6YYL1 179 aa14.1□□□□□ -0.15
SND1-201ENST00000354725 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
SND1-201ENST00000354725 CWC22Q9HCG8 908 aaKnown RBP14.1□□□□□ -0.15
SND1-201ENST00000354725 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
SND1-201ENST00000354725 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
SND1-201ENST00000354725 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
SND1-201ENST00000354725 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
SND1-201ENST00000354725 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
SND1-201ENST00000354725 TESK2Q96S53 571 aa14.08□□□□□ -0.16
SND1-201ENST00000354725 CPS1P31327 1500 aa14.07□□□□□ -0.16
SND1-201ENST00000354725 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
SND1-201ENST00000354725 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms