RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TBX22Q9Y458 520 aa28.05■■■□□ 2.08
TRIM4-202ENST00000354241 TMC1Q8TDI8 760 aa28.04■■■□□ 2.08
TRIM4-202ENST00000354241 KTN1Q86UP2 1357 aaKnown RBP28.04■■■□□ 2.08
TRIM4-202ENST00000354241 FAM135BQ49AJ0 1406 aa28.03■■■□□ 2.08
TRIM4-202ENST00000354241 SRPK2P78362 688 aaKnown RBP28.03■■■□□ 2.08
TRIM4-202ENST00000354241 KNSTRNQ9Y448 316 aa28.03■■■□□ 2.08
TRIM4-202ENST00000354241 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
TRIM4-202ENST00000354241 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
TRIM4-202ENST00000354241 RALBP1Q15311 655 aa28.01■■■□□ 2.07
TRIM4-202ENST00000354241 CCDC184Q52MB2 194 aa28■■■□□ 2.07
TRIM4-202ENST00000354241 CC2D1BQ5T0F9 858 aaKnown RBP28■■■□□ 2.07
TRIM4-202ENST00000354241 SLC12A5Q9H2X9 1139 aa27.99■■■□□ 2.07
TRIM4-202ENST00000354241 ROBO2Q9HCK4 1378 aa27.99■■■□□ 2.07
TRIM4-202ENST00000354241 CDK19Q9BWU1 502 aa27.98■■■□□ 2.07
TRIM4-202ENST00000354241 MRS2Q9HD23 443 aa27.98■■■□□ 2.07
TRIM4-202ENST00000354241 CENPBP07199 599 aaPredicted RBP27.97■■■□□ 2.07
TRIM4-202ENST00000354241 PARD3Q8TEW0 1356 aa27.97■■■□□ 2.07
TRIM4-202ENST00000354241 AMOTL2Q9Y2J4 779 aa27.96■■■□□ 2.07
TRIM4-202ENST00000354241 ATAD2Q6PL18 1390 aa27.95■■■□□ 2.07
TRIM4-202ENST00000354241 MYBBP1AQ9BQG0 1328 aaKnown RBP27.95■■■□□ 2.06
TRIM4-202ENST00000354241 CARD14Q9BXL6 1004 aa27.93■■■□□ 2.06
TRIM4-202ENST00000354241 AMER1Q5JTC6 1135 aaPredicted RBP27.92■■■□□ 2.06
TRIM4-202ENST00000354241 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
TRIM4-202ENST00000354241 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
TRIM4-202ENST00000354241 NINLQ9Y2I6 1382 aa27.91■■■□□ 2.06
TRIM4-202ENST00000354241 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.9■■■□□ 2.06
TRIM4-202ENST00000354241 PIK3R4Q99570 1358 aa27.9■■■□□ 2.06
TRIM4-202ENST00000354241 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
TRIM4-202ENST00000354241 PTCH1Q13635 1447 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 NSD3Q9BZ95 1437 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 WASLO00401 505 aaPredicted RBP27.89■■■□□ 2.06
TRIM4-202ENST00000354241 ANKRD36BQ8N2N9 1353 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 NPC1L1Q9UHC9 1359 aa27.88■■■□□ 2.05
TRIM4-202ENST00000354241 NCKAP5LQ9HCH0 1330 aa27.87■■■□□ 2.05
TRIM4-202ENST00000354241 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
TRIM4-202ENST00000354241 ADGRB2O60241 1585 aa27.86■■■□□ 2.05
TRIM4-202ENST00000354241 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
TRIM4-202ENST00000354241 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 FAM9BQ8IZU0 186 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 USP32Q8NFA0 1604 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 KCNA6P17658 529 aa27.82■■■□□ 2.04
TRIM4-202ENST00000354241 A0A1W2PP64 1363 aa27.82■■■□□ 2.04
TRIM4-202ENST00000354241 TERF2IPQ9NYB0 399 aa27.81■■■□□ 2.04
TRIM4-202ENST00000354241 CABP1Q9NZU7 370 aa27.81■■■□□ 2.04
TRIM4-202ENST00000354241 CD163L1Q9NR16 1453 aa27.79■■■□□ 2.04
TRIM4-202ENST00000354241 HDGFL2Q7Z4V5 671 aaPredicted RBP27.78■■■□□ 2.04
TRIM4-202ENST00000354241 NUDT16Q96DE0 195 aaKnown RBP27.78■■■□□ 2.04
TRIM4-202ENST00000354241 CGNL1Q0VF96 1302 aa27.77■■■□□ 2.04
TRIM4-202ENST00000354241 PPIP5K1Q6PFW1 1433 aa27.76■■■□□ 2.04
TRIM4-202ENST00000354241 ATP7BP35670 1465 aa27.76■■■□□ 2.03
TRIM4-202ENST00000354241 PPP2R1AP30153 589 aa27.75■■■□□ 2.03
TRIM4-202ENST00000354241 HSPA2P54652 639 aa27.73■■■□□ 2.03
TRIM4-202ENST00000354241 CCDC61Q9Y6R9 512 aa27.73■■■□□ 2.03
TRIM4-202ENST00000354241 PNISRQ8TF01 805 aaKnown RBP27.72■■■□□ 2.03
TRIM4-202ENST00000354241 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
TRIM4-202ENST00000354241 HNRNPUQ00839 825 aaKnown RBP eCLIP27.71■■■□□ 2.03
TRIM4-202ENST00000354241 NUTM2FA1L443 756 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 ITSN1Q15811 1721 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 MORC1Q86VD1 984 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 TOPAZ1Q8N9V7 1692 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 CDC42BPGQ6DT37 1551 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 NSD2O96028 1365 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 NWD1Q149M9 1564 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 KIF20BQ96Q89 1820 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 AKAP12Q02952 1782 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 CPSF1Q10570 1443 aaKnown RBP27.66■■■□□ 2.02
TRIM4-202ENST00000354241 ANKRD26Q9UPS8 1709 aa27.65■■■□□ 2.02
TRIM4-202ENST00000354241 MON2Q7Z3U7 1717 aa27.65■■■□□ 2.02
TRIM4-202ENST00000354241 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
TRIM4-202ENST00000354241 RBM33Q96EV2 1170 aaKnown RBP27.63■■■□□ 2.01
TRIM4-202ENST00000354241 FMN2Q9NZ56 1722 aa27.63■■■□□ 2.01
TRIM4-202ENST00000354241 TNNT2P45379 298 aaPredicted RBP27.63■■■□□ 2.01
TRIM4-202ENST00000354241 GGNBP2Q9H3C7 697 aa27.61■■■□□ 2.01
TRIM4-202ENST00000354241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.61■■■□□ 2.01
TRIM4-202ENST00000354241 FYB1O15117 783 aa27.6■■■□□ 2.01
TRIM4-202ENST00000354241 EDC4Q6P2E9 1401 aaKnown RBP27.6■■■□□ 2.01
TRIM4-202ENST00000354241 NKTRP30414 1462 aaKnown RBP27.59■■■□□ 2.01
TRIM4-202ENST00000354241 STRCQ7RTU9 1775 aa27.58■■■□□ 2.01
TRIM4-202ENST00000354241 ZNF692Q9BU19 519 aaPredicted RBP27.58■■■□□ 2.01
TRIM4-202ENST00000354241 ANKARQ7Z5J8 1434 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 ADGRL3Q9HAR2 1447 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 PLEKHG3A1L390 1219 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 ACEP12821 1306 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 C14orf37Q86TY3 774 aa27.56■■■□□ 2
TRIM4-202ENST00000354241 PROSER2Q86WR7 435 aaPredicted RBP27.55■■■□□ 2
TRIM4-202ENST00000354241 PMFBP1Q8TBY8 1022 aa27.53■■■□□ 2
TRIM4-202ENST00000354241 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
TRIM4-202ENST00000354241 NRKQ7Z2Y5 1582 aa27.52■■■□□ 2
TRIM4-202ENST00000354241 WDR43Q15061 677 aaKnown RBP eCLIP27.51■■■□□ 2
TRIM4-202ENST00000354241 NME9Q86XW9 330 aa27.49■■□□□ 1.99
TRIM4-202ENST00000354241 USP6P35125 1406 aa27.49■■□□□ 1.99
TRIM4-202ENST00000354241 POLR3AO14802 1390 aaPredicted RBP27.49■■□□□ 1.99
TRIM4-202ENST00000354241 NGDNQ8NEJ9 315 aaKnown RBP27.49■■□□□ 1.99
TRIM4-202ENST00000354241 ZBED9Q6R2W3 1325 aa27.48■■□□□ 1.99
TRIM4-202ENST00000354241 MTHFSP49914 203 aa27.48■■□□□ 1.99
TRIM4-202ENST00000354241 TTC21BQ7Z4L5 1316 aa27.46■■□□□ 1.99
TRIM4-202ENST00000354241 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.99
TRIM4-202ENST00000354241 SENP3-EIF4A1A0A087X0R7 540 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms