RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 CCER2I3L3R5 266 aa14.31□□□□□ -0.12
TRAF3-201ENST00000347662 CPLX1O14810 134 aa14.3□□□□□ -0.12
TRAF3-201ENST00000347662 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
TRAF3-201ENST00000347662 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
TRAF3-201ENST00000347662 MYO6Q9UM54 1294 aa14.29□□□□□ -0.12
TRAF3-201ENST00000347662 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
TRAF3-201ENST00000347662 KDM4AO75164 1064 aa14.29□□□□□ -0.12
TRAF3-201ENST00000347662 ACBD3Q9H3P7 528 aa14.29□□□□□ -0.12
TRAF3-201ENST00000347662 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
TRAF3-201ENST00000347662 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 NLRP6P59044 892 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-201ENST00000347662 HMOX1P09601 288 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 ENOX2Q16206 610 aaKnown RBP14.28□□□□□ -0.12
TRAF3-201ENST00000347662 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
TRAF3-201ENST00000347662 TRDNQ13061 729 aa14.27□□□□□ -0.12
TRAF3-201ENST00000347662 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.12
TRAF3-201ENST00000347662 SYCP1Q15431 976 aa14.27□□□□□ -0.12
TRAF3-201ENST00000347662 HSP90B2PQ58FF3 399 aa14.27□□□□□ -0.12
TRAF3-201ENST00000347662 PDILTQ8N807 584 aa14.27□□□□□ -0.13
TRAF3-201ENST00000347662 BICD2Q8TD16 824 aa14.27□□□□□ -0.13
TRAF3-201ENST00000347662 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
TRAF3-201ENST00000347662 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
TRAF3-201ENST00000347662 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
TRAF3-201ENST00000347662 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
TRAF3-201ENST00000347662 MYOM3Q5VTT5 1437 aa14.26□□□□□ -0.13
TRAF3-201ENST00000347662 ANO2Q9NQ90 1003 aa14.26□□□□□ -0.13
TRAF3-201ENST00000347662 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
TRAF3-201ENST00000347662 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 MNS1Q8NEH6 495 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 USP47Q96K76 1375 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 NEBLO76041 1014 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 SEPT11Q9NVA2 429 aaKnown RBP14.25□□□□□ -0.13
TRAF3-201ENST00000347662 DIAPH3Q9NSV4 1193 aa14.25□□□□□ -0.13
TRAF3-201ENST00000347662 C9orf78Q9NZ63 289 aaPredicted RBP14.25□□□□□ -0.13
TRAF3-201ENST00000347662 TSPYL1Q9H0U9 437 aa14.24□□□□□ -0.13
TRAF3-201ENST00000347662 SLC26A8Q96RN1 970 aa14.24□□□□□ -0.13
TRAF3-201ENST00000347662 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
TRAF3-201ENST00000347662 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
TRAF3-201ENST00000347662 ANKRD18AQ8IVF6 992 aa14.24□□□□□ -0.13
TRAF3-201ENST00000347662 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
TRAF3-201ENST00000347662 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
TRAF3-201ENST00000347662 FAM13BQ9NYF5 915 aa14.22□□□□□ -0.13
TRAF3-201ENST00000347662 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
TRAF3-201ENST00000347662 APAF1O14727 1248 aa14.21□□□□□ -0.13
TRAF3-201ENST00000347662 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
TRAF3-201ENST00000347662 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
TRAF3-201ENST00000347662 ARGLU1Q9NWB6 273 aaPredicted RBP14.21□□□□□ -0.13
TRAF3-201ENST00000347662 AIMP1Q12904 312 aaKnown RBP14.21□□□□□ -0.13
TRAF3-201ENST00000347662 CLASRPQ8N2M8 674 aaKnown RBP14.21□□□□□ -0.13
TRAF3-201ENST00000347662 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.14
TRAF3-201ENST00000347662 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.14
TRAF3-201ENST00000347662 SAFBQ15424 915 aaKnown RBP eCLIP14.21□□□□□ -0.14
TRAF3-201ENST00000347662 ANKRD45Q5TZF3 282 aa14.21□□□□□ -0.14
TRAF3-201ENST00000347662 RIPK4P57078 832 aa14.2□□□□□ -0.14
TRAF3-201ENST00000347662 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
TRAF3-201ENST00000347662 THEMISQ8N1K5 641 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-201ENST00000347662 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
TRAF3-201ENST00000347662 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
TRAF3-201ENST00000347662 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
TRAF3-201ENST00000347662 BCCIPQ9P287 314 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAF3-201ENST00000347662 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
TRAF3-201ENST00000347662 PLIN1O60240 522 aa14.19□□□□□ -0.14
TRAF3-201ENST00000347662 BRMS1Q9HCU9 246 aa14.19□□□□□ -0.14
TRAF3-201ENST00000347662 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
TRAF3-201ENST00000347662 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
TRAF3-201ENST00000347662 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
TRAF3-201ENST00000347662 EZRP15311 586 aaKnown RBP14.18□□□□□ -0.14
TRAF3-201ENST00000347662 CDK5RAP3Q96JB5 506 aa14.18□□□□□ -0.14
TRAF3-201ENST00000347662 NF2P35240 595 aa14.18□□□□□ -0.14
TRAF3-201ENST00000347662 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-201ENST00000347662 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-201ENST00000347662 PRAM1Q96QH2 718 aa14.17□□□□□ -0.14
TRAF3-201ENST00000347662 GPRASP1Q5JY77 1395 aa14.17□□□□□ -0.14
TRAF3-201ENST00000347662 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAF3-201ENST00000347662 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-201ENST00000347662 FKBP5Q13451 457 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-201ENST00000347662 TAX1BP1Q86VP1 789 aa14.17□□□□□ -0.14
TRAF3-201ENST00000347662 ERLIN2O94905 339 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
TRAF3-201ENST00000347662 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 RBM19Q9Y4C8 960 aaKnown RBP14.16□□□□□ -0.14
TRAF3-201ENST00000347662 IFIT2P09913 472 aaKnown RBP14.16□□□□□ -0.14
TRAF3-201ENST00000347662 SF3B2Q13435 895 aaKnown RBP14.16□□□□□ -0.14
TRAF3-201ENST00000347662 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 ATP2B2Q01814 1243 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
TRAF3-201ENST00000347662 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-201ENST00000347662 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
TRAF3-201ENST00000347662 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-201ENST00000347662 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-201ENST00000347662 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
TRAF3-201ENST00000347662 DYDC1Q8WWB3 177 aa14.15□□□□□ -0.14
TRAF3-201ENST00000347662 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms