RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 RALBP1Q15311 655 aa30.09■■■□□ 2.41
CACNB1-201ENST00000344140 DIP2AQ14689 1571 aa30.09■■■□□ 2.41
CACNB1-201ENST00000344140 KNSTRNQ9Y448 316 aa30.06■■■□□ 2.4
CACNB1-201ENST00000344140 MINK1Q8N4C8 1332 aaPredicted RBP30.06■■■□□ 2.4
CACNB1-201ENST00000344140 CPS1P31327 1500 aa30.06■■■□□ 2.4
CACNB1-201ENST00000344140 CENPBP07199 599 aaPredicted RBP30.05■■■□□ 2.4
CACNB1-201ENST00000344140 SLC26A8Q96RN1 970 aa30.05■■■□□ 2.4
CACNB1-201ENST00000344140 NCKAP5LQ9HCH0 1330 aa30.05■■■□□ 2.4
CACNB1-201ENST00000344140 WAPLQ7Z5K2 1190 aa30.04■■■□□ 2.4
CACNB1-201ENST00000344140 PLEKHH1Q9ULM0 1364 aa30.01■■■□□ 2.4
CACNB1-201ENST00000344140 NINLQ9Y2I6 1382 aa30.01■■■□□ 2.4
CACNB1-201ENST00000344140 ATAD2Q6PL18 1390 aa30.01■■■□□ 2.39
CACNB1-201ENST00000344140 PARD3Q8TEW0 1356 aa30.01■■■□□ 2.39
CACNB1-201ENST00000344140 SRPK2P78362 688 aaKnown RBP30■■■□□ 2.39
CACNB1-201ENST00000344140 CNGB1Q14028 1251 aaPredicted RBP30■■■□□ 2.39
CACNB1-201ENST00000344140 TMC1Q8TDI8 760 aa29.99■■■□□ 2.39
CACNB1-201ENST00000344140 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
CACNB1-201ENST00000344140 NPHP4O75161 1426 aaPredicted RBP29.99■■■□□ 2.39
CACNB1-201ENST00000344140 NPC1L1Q9UHC9 1359 aa29.98■■■□□ 2.39
CACNB1-201ENST00000344140 PIK3R4Q99570 1358 aa29.98■■■□□ 2.39
CACNB1-201ENST00000344140 MYBBP1AQ9BQG0 1328 aaKnown RBP29.98■■■□□ 2.39
CACNB1-201ENST00000344140 MRS2Q9HD23 443 aa29.97■■■□□ 2.39
CACNB1-201ENST00000344140 SLC12A5Q9H2X9 1139 aa29.97■■■□□ 2.39
CACNB1-201ENST00000344140 CDK19Q9BWU1 502 aa29.96■■■□□ 2.39
CACNB1-201ENST00000344140 PTPRUQ92729 1446 aa29.96■■■□□ 2.39
CACNB1-201ENST00000344140 ROBO2Q9HCK4 1378 aa29.96■■■□□ 2.39
CACNB1-201ENST00000344140 AMER1Q5JTC6 1135 aaPredicted RBP29.95■■■□□ 2.39
CACNB1-201ENST00000344140 STRCQ7RTU9 1775 aa29.95■■■□□ 2.39
CACNB1-201ENST00000344140 CC2D1BQ5T0F9 858 aaKnown RBP29.95■■■□□ 2.38
CACNB1-201ENST00000344140 AMOTL2Q9Y2J4 779 aa29.93■■■□□ 2.38
CACNB1-201ENST00000344140 CCDC184Q52MB2 194 aa29.93■■■□□ 2.38
CACNB1-201ENST00000344140 PTCH1Q13635 1447 aa29.92■■■□□ 2.38
CACNB1-201ENST00000344140 CARD14Q9BXL6 1004 aa29.92■■■□□ 2.38
CACNB1-201ENST00000344140 ANKRD36BQ8N2N9 1353 aa29.91■■■□□ 2.38
CACNB1-201ENST00000344140 WASLO00401 505 aaPredicted RBP29.9■■■□□ 2.38
CACNB1-201ENST00000344140 BRD4O60885 1362 aaPredicted RBP29.89■■■□□ 2.38
CACNB1-201ENST00000344140 NLRP13Q86W25 1043 aa29.88■■■□□ 2.37
CACNB1-201ENST00000344140 NSD3Q9BZ95 1437 aa29.86■■■□□ 2.37
CACNB1-201ENST00000344140 XRN1Q8IZH2 1706 aaKnown RBP29.86■■■□□ 2.37
CACNB1-201ENST00000344140 TERF2IPQ9NYB0 399 aa29.85■■■□□ 2.37
CACNB1-201ENST00000344140 ADGRB2O60241 1585 aa29.84■■■□□ 2.37
CACNB1-201ENST00000344140 DMRT2Q9Y5R5 561 aa29.83■■■□□ 2.37
CACNB1-201ENST00000344140 USP32Q8NFA0 1604 aa29.81■■■□□ 2.36
CACNB1-201ENST00000344140 CGNL1Q0VF96 1302 aa29.8■■■□□ 2.36
CACNB1-201ENST00000344140 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.79■■■□□ 2.36
CACNB1-201ENST00000344140 A0A1W2PP64 1363 aa29.79■■■□□ 2.36
CACNB1-201ENST00000344140 KCNA6P17658 529 aa29.78■■■□□ 2.36
CACNB1-201ENST00000344140 HDGFL2Q7Z4V5 671 aaPredicted RBP29.78■■■□□ 2.36
CACNB1-201ENST00000344140 CABP1Q9NZU7 370 aa29.78■■■□□ 2.36
CACNB1-201ENST00000344140 FAM9BQ8IZU0 186 aa29.77■■■□□ 2.36
CACNB1-201ENST00000344140 ATP7BP35670 1465 aa29.77■■■□□ 2.36
CACNB1-201ENST00000344140 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
CACNB1-201ENST00000344140 NSD2O96028 1365 aa29.76■■■□□ 2.35
CACNB1-201ENST00000344140 CD163L1Q9NR16 1453 aa29.75■■■□□ 2.35
CACNB1-201ENST00000344140 CHD2O14647 1828 aaKnown RBP29.75■■■□□ 2.35
CACNB1-201ENST00000344140 CCDC61Q9Y6R9 512 aa29.75■■■□□ 2.35
CACNB1-201ENST00000344140 PNISRQ8TF01 805 aaKnown RBP29.74■■■□□ 2.35
CACNB1-201ENST00000344140 PPP2R1AP30153 589 aa29.74■■■□□ 2.35
CACNB1-201ENST00000344140 PPIP5K1Q6PFW1 1433 aa29.72■■■□□ 2.35
CACNB1-201ENST00000344140 MORC1Q86VD1 984 aa29.68■■■□□ 2.34
CACNB1-201ENST00000344140 PRR36Q9H6K5 1346 aa29.67■■■□□ 2.34
CACNB1-201ENST00000344140 HNRNPUQ00839 825 aaKnown RBP eCLIP29.66■■■□□ 2.34
CACNB1-201ENST00000344140 CPSF1Q10570 1443 aaKnown RBP29.66■■■□□ 2.34
CACNB1-201ENST00000344140 NWD1Q149M9 1564 aa29.65■■■□□ 2.34
CACNB1-201ENST00000344140 CDC42BPGQ6DT37 1551 aa29.64■■■□□ 2.34
CACNB1-201ENST00000344140 ZNF692Q9BU19 519 aaPredicted RBP29.61■■■□□ 2.33
CACNB1-201ENST00000344140 PLEKHG3A1L390 1219 aa29.6■■■□□ 2.33
CACNB1-201ENST00000344140 EDC4Q6P2E9 1401 aaKnown RBP29.6■■■□□ 2.33
CACNB1-201ENST00000344140 TOPAZ1Q8N9V7 1692 aa29.6■■■□□ 2.33
CACNB1-201ENST00000344140 ZNF335Q9H4Z2 1342 aaPredicted RBP29.6■■■□□ 2.33
CACNB1-201ENST00000344140 ANKARQ7Z5J8 1434 aa29.59■■■□□ 2.33
CACNB1-201ENST00000344140 NKTRP30414 1462 aaKnown RBP29.58■■■□□ 2.33
CACNB1-201ENST00000344140 STRCP1A6NGW2 1772 aa29.58■■■□□ 2.33
CACNB1-201ENST00000344140 FYB1O15117 783 aa29.58■■■□□ 2.33
CACNB1-201ENST00000344140 INSRP06213 1382 aa29.57■■■□□ 2.32
CACNB1-201ENST00000344140 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
CACNB1-201ENST00000344140 NUTM2FA1L443 756 aa29.54■■■□□ 2.32
CACNB1-201ENST00000344140 GGNBP2Q9H3C7 697 aa29.54■■■□□ 2.32
CACNB1-201ENST00000344140 ITSN1Q15811 1721 aa29.54■■■□□ 2.32
CACNB1-201ENST00000344140 PROSER2Q86WR7 435 aaPredicted RBP29.53■■■□□ 2.32
CACNB1-201ENST00000344140 AKAP12Q02952 1782 aa29.53■■■□□ 2.32
CACNB1-201ENST00000344140 MON2Q7Z3U7 1717 aa29.53■■■□□ 2.32
CACNB1-201ENST00000344140 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
CACNB1-201ENST00000344140 NALCNQ8IZF0 1738 aa29.52■■■□□ 2.32
CACNB1-201ENST00000344140 FMN2Q9NZ56 1722 aa29.51■■■□□ 2.32
CACNB1-201ENST00000344140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.51■■■□□ 2.31
CACNB1-201ENST00000344140 KIF20BQ96Q89 1820 aa29.51■■■□□ 2.31
CACNB1-201ENST00000344140 ACEP12821 1306 aa29.51■■■□□ 2.31
CACNB1-201ENST00000344140 ZBED9Q6R2W3 1325 aa29.51■■■□□ 2.31
CACNB1-201ENST00000344140 POLR3AO14802 1390 aaPredicted RBP29.51■■■□□ 2.31
CACNB1-201ENST00000344140 TNNT2P45379 298 aaPredicted RBP29.51■■■□□ 2.31
CACNB1-201ENST00000344140 WDR43Q15061 677 aaKnown RBP eCLIP29.48■■■□□ 2.31
CACNB1-201ENST00000344140 RBM33Q96EV2 1170 aaKnown RBP29.47■■■□□ 2.31
CACNB1-201ENST00000344140 C14orf37Q86TY3 774 aa29.46■■■□□ 2.31
CACNB1-201ENST00000344140 USP6P35125 1406 aa29.45■■■□□ 2.31
CACNB1-201ENST00000344140 TMEM94Q12767 1356 aa29.44■■■□□ 2.3
CACNB1-201ENST00000344140 MTHFSP49914 203 aa29.44■■■□□ 2.3
CACNB1-201ENST00000344140 CFAP53Q96M91 514 aa29.44■■■□□ 2.3
CACNB1-201ENST00000344140 BLMP54132 1417 aaPredicted RBP29.43■■■□□ 2.3
CACNB1-201ENST00000344140 SCAF1Q9H7N4 1312 aaKnown RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms