RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
CLDN18-202ENST00000343735 PRAM1Q96QH2 718 aa13.39□□□□□ -0.27
CLDN18-202ENST00000343735 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
CLDN18-202ENST00000343735 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
CLDN18-202ENST00000343735 FKBP8Q14318 412 aa13.38□□□□□ -0.27
CLDN18-202ENST00000343735 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 CPS1P31327 1500 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
CLDN18-202ENST00000343735 ANP32CO43423 234 aa13.36□□□□□ -0.27
CLDN18-202ENST00000343735 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
CLDN18-202ENST00000343735 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
CLDN18-202ENST00000343735 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
CLDN18-202ENST00000343735 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLDN18-202ENST00000343735 KCNA6P17658 529 aa13.33□□□□□ -0.28
CLDN18-202ENST00000343735 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
CLDN18-202ENST00000343735 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
CLDN18-202ENST00000343735 SAFB2Q14151 953 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLDN18-202ENST00000343735 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
CLDN18-202ENST00000343735 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
CLDN18-202ENST00000343735 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
CLDN18-202ENST00000343735 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
CLDN18-202ENST00000343735 HSPA2P54652 639 aa13.31□□□□□ -0.28
CLDN18-202ENST00000343735 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
CLDN18-202ENST00000343735 SRPK2P78362 688 aaKnown RBP13.31□□□□□ -0.28
CLDN18-202ENST00000343735 XRN1Q8IZH2 1706 aaKnown RBP13.31□□□□□ -0.28
CLDN18-202ENST00000343735 CHD2O14647 1828 aaKnown RBP13.3□□□□□ -0.28
CLDN18-202ENST00000343735 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
CLDN18-202ENST00000343735 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
CLDN18-202ENST00000343735 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
CLDN18-202ENST00000343735 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
CLDN18-202ENST00000343735 CCDC184Q52MB2 194 aa13.28□□□□□ -0.28
CLDN18-202ENST00000343735 ADGRB2O60241 1585 aa13.27□□□□□ -0.28
CLDN18-202ENST00000343735 NWD1Q149M9 1564 aa13.27□□□□□ -0.28
CLDN18-202ENST00000343735 PANK3Q9H999 370 aa13.27□□□□□ -0.29
CLDN18-202ENST00000343735 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
CLDN18-202ENST00000343735 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
CLDN18-202ENST00000343735 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
CLDN18-202ENST00000343735 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
CLDN18-202ENST00000343735 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
CLDN18-202ENST00000343735 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
CLDN18-202ENST00000343735 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
CLDN18-202ENST00000343735 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
CLDN18-202ENST00000343735 STRCQ7RTU9 1775 aa13.23□□□□□ -0.29
CLDN18-202ENST00000343735 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
CLDN18-202ENST00000343735 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
CLDN18-202ENST00000343735 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
CLDN18-202ENST00000343735 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
CLDN18-202ENST00000343735 RALBP1Q15311 655 aa13.22□□□□□ -0.29
CLDN18-202ENST00000343735 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
CLDN18-202ENST00000343735 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
CLDN18-202ENST00000343735 MYOM1P52179 1685 aa13.22□□□□□ -0.29
CLDN18-202ENST00000343735 NEFLP07196 543 aa13.22□□□□□ -0.29
CLDN18-202ENST00000343735 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
CLDN18-202ENST00000343735 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
CLDN18-202ENST00000343735 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
CLDN18-202ENST00000343735 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
CLDN18-202ENST00000343735 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
CLDN18-202ENST00000343735 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.3
CLDN18-202ENST00000343735 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
CLDN18-202ENST00000343735 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CLDN18-202ENST00000343735 ATP7BP35670 1465 aa13.2□□□□□ -0.3
CLDN18-202ENST00000343735 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
CLDN18-202ENST00000343735 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
CLDN18-202ENST00000343735 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
CLDN18-202ENST00000343735 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
CLDN18-202ENST00000343735 PPIP5K1Q6PFW1 1433 aa13.18□□□□□ -0.3
CLDN18-202ENST00000343735 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
CLDN18-202ENST00000343735 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
CLDN18-202ENST00000343735 CGNL1Q0VF96 1302 aa13.17□□□□□ -0.3
CLDN18-202ENST00000343735 NSD2O96028 1365 aa13.17□□□□□ -0.3
CLDN18-202ENST00000343735 DCCP43146 1447 aa13.16□□□□□ -0.3
CLDN18-202ENST00000343735 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 ITSN1Q15811 1721 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 RTN4Q9NQC3 1192 aaKnown RBP13.15□□□□□ -0.3
CLDN18-202ENST00000343735 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 ATF3P18847 181 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
CLDN18-202ENST00000343735 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
CLDN18-202ENST00000343735 FMN2Q9NZ56 1722 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 MSH6P52701 1360 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
CLDN18-202ENST00000343735 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
CLDN18-202ENST00000343735 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
CLDN18-202ENST00000343735 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
CLDN18-202ENST00000343735 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
CLDN18-202ENST00000343735 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
CLDN18-202ENST00000343735 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
CLDN18-202ENST00000343735 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
CLDN18-202ENST00000343735 CD163L1Q9NR16 1453 aa13.12□□□□□ -0.31
CLDN18-202ENST00000343735 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
CLDN18-202ENST00000343735 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
CLDN18-202ENST00000343735 ACEP12821 1306 aa13.11□□□□□ -0.31
CLDN18-202ENST00000343735 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms