RNA–Protein interactions for RNA: ENST00000342835.8

SPTB-201, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-201ENST00000342835 NSD3Q9BZ95 1437 aa29.44■■■□□ 2.3
SPTB-201ENST00000342835 NRXN3Q9Y4C0 1643 aa29.43■■■□□ 2.3
SPTB-201ENST00000342835 C3P01024 1663 aa29.42■■■□□ 2.3
SPTB-201ENST00000342835 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
SPTB-201ENST00000342835 NSD2O96028 1365 aa29.41■■■□□ 2.3
SPTB-201ENST00000342835 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
SPTB-201ENST00000342835 KNDC1Q76NI1 1749 aa29.39■■■□□ 2.3
SPTB-201ENST00000342835 CGNL1Q0VF96 1302 aa29.39■■■□□ 2.3
SPTB-201ENST00000342835 WDR43Q15061 677 aaKnown RBP eCLIP29.38■■■□□ 2.29
SPTB-201ENST00000342835 SRPK2P78362 688 aaKnown RBP29.37■■■□□ 2.29
SPTB-201ENST00000342835 NUDCQ9Y266 331 aa29.37■■■□□ 2.29
SPTB-201ENST00000342835 SAFB2Q14151 953 aaKnown RBP eCLIP29.37■■■□□ 2.29
SPTB-201ENST00000342835 PDE3BQ13370 1112 aa29.36■■■□□ 2.29
SPTB-201ENST00000342835 SIRT1Q96EB6 747 aa29.35■■■□□ 2.29
SPTB-201ENST00000342835 CABP2Q9NPB3 220 aa29.35■■■□□ 2.29
SPTB-201ENST00000342835 ERICH6BQ5W0A0 696 aa29.34■■■□□ 2.29
SPTB-201ENST00000342835 MINK1Q8N4C8 1332 aaPredicted RBP29.34■■■□□ 2.29
SPTB-201ENST00000342835 TECPR2O15040 1411 aa29.34■■■□□ 2.29
SPTB-201ENST00000342835 FAM135BQ49AJ0 1406 aa29.33■■■□□ 2.29
SPTB-201ENST00000342835 PLEKHG1Q9ULL1 1385 aa29.33■■■□□ 2.29
SPTB-201ENST00000342835 SENP3Q9H4L4 574 aaPredicted RBP29.32■■■□□ 2.28
SPTB-201ENST00000342835 TERF2IPQ9NYB0 399 aa29.31■■■□□ 2.28
SPTB-201ENST00000342835 MORC1Q86VD1 984 aa29.31■■■□□ 2.28
SPTB-201ENST00000342835 CPS1P31327 1500 aa29.3■■■□□ 2.28
SPTB-201ENST00000342835 SLIT1O75093 1534 aa29.3■■■□□ 2.28
SPTB-201ENST00000342835 EID1Q9Y6B2 187 aa29.28■■■□□ 2.28
SPTB-201ENST00000342835 POLR3AO14802 1390 aaPredicted RBP29.28■■■□□ 2.28
SPTB-201ENST00000342835 METP08581 1390 aa29.28■■■□□ 2.28
SPTB-201ENST00000342835 BCANQ96GW7 911 aa29.27■■■□□ 2.28
SPTB-201ENST00000342835 ARHGAP23Q9P227 1491 aa29.27■■■□□ 2.28
SPTB-201ENST00000342835 CDK19Q9BWU1 502 aa29.26■■■□□ 2.27
SPTB-201ENST00000342835 CEBPAP49715 358 aaPredicted RBP29.25■■■□□ 2.27
SPTB-201ENST00000342835 HDGFL2Q7Z4V5 671 aaPredicted RBP29.25■■■□□ 2.27
SPTB-201ENST00000342835 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
SPTB-201ENST00000342835 ADAMTS8Q9UP79 889 aa29.24■■■□□ 2.27
SPTB-201ENST00000342835 ADAMTS13Q76LX8 1427 aa29.22■■■□□ 2.27
SPTB-201ENST00000342835 THEMISQ8N1K5 641 aaPredicted RBP29.22■■■□□ 2.27
SPTB-201ENST00000342835 MED14O60244 1454 aa29.22■■■□□ 2.27
SPTB-201ENST00000342835 ATP7BP35670 1465 aa29.22■■■□□ 2.27
SPTB-201ENST00000342835 TXNDC2Q86VQ3 553 aa29.2■■■□□ 2.27
SPTB-201ENST00000342835 DIP2AQ14689 1571 aa29.19■■■□□ 2.26
SPTB-201ENST00000342835 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
SPTB-201ENST00000342835 WAPLQ7Z5K2 1190 aa29.19■■■□□ 2.26
SPTB-201ENST00000342835 ANKRD26Q9UPS8 1709 aa29.18■■■□□ 2.26
SPTB-201ENST00000342835 NGEFQ8N5V2 710 aa29.18■■■□□ 2.26
SPTB-201ENST00000342835 CFAP53Q96M91 514 aa29.17■■■□□ 2.26
SPTB-201ENST00000342835 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
SPTB-201ENST00000342835 WASLO00401 505 aaPredicted RBP29.15■■■□□ 2.26
SPTB-201ENST00000342835 LTKP29376 864 aa29.14■■■□□ 2.26
SPTB-201ENST00000342835 ADGRB2O60241 1585 aa29.13■■■□□ 2.25
SPTB-201ENST00000342835 RIMS1Q86UR5 1692 aaKnown RBP29.13■■■□□ 2.25
SPTB-201ENST00000342835 RNF123Q5XPI4 1314 aa29.13■■■□□ 2.25
SPTB-201ENST00000342835 KDM4FA0A1W2PPD8 638 aa29.11■■■□□ 2.25
SPTB-201ENST00000342835 CEP170BQ9Y4F5 1589 aaPredicted RBP29.11■■■□□ 2.25
SPTB-201ENST00000342835 KIF20BQ96Q89 1820 aa29.1■■■□□ 2.25
SPTB-201ENST00000342835 CABP1Q9NZU7 370 aa29.1■■■□□ 2.25
SPTB-201ENST00000342835 TBX22Q9Y458 520 aa29.1■■■□□ 2.25
SPTB-201ENST00000342835 SALL2Q9Y467 1007 aaPredicted RBP29.08■■■□□ 2.25
SPTB-201ENST00000342835 ADAMTSL3P82987 1691 aa29.08■■■□□ 2.25
SPTB-201ENST00000342835 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
SPTB-201ENST00000342835 ROBO2Q9HCK4 1378 aa29.06■■■□□ 2.24
SPTB-201ENST00000342835 TNNT2P45379 298 aaPredicted RBP29.06■■■□□ 2.24
SPTB-201ENST00000342835 PPIP5K1Q6PFW1 1433 aa29.05■■■□□ 2.24
SPTB-201ENST00000342835 SENP3-EIF4A1A0A087X0R7 540 aa29.05■■■□□ 2.24
SPTB-201ENST00000342835 MTHFSP49914 203 aa29.05■■■□□ 2.24
SPTB-201ENST00000342835 PLPPR3Q6T4P5 718 aa29.05■■■□□ 2.24
SPTB-201ENST00000342835 PTCH1Q13635 1447 aa29.05■■■□□ 2.24
SPTB-201ENST00000342835 ZNF142P52746 1687 aaPredicted RBP29.04■■■□□ 2.24
SPTB-201ENST00000342835 PPP4R2Q9NY27 417 aa29.04■■■□□ 2.24
SPTB-201ENST00000342835 CDC42BPGQ6DT37 1551 aa29.04■■■□□ 2.24
SPTB-201ENST00000342835 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
SPTB-201ENST00000342835 EDC4Q6P2E9 1401 aaKnown RBP29.03■■■□□ 2.24
SPTB-201ENST00000342835 FYB1O15117 783 aa29.03■■■□□ 2.24
SPTB-201ENST00000342835 CCDC61Q9Y6R9 512 aa29.02■■■□□ 2.24
SPTB-201ENST00000342835 IRX6P78412 446 aaPredicted RBP29.01■■■□□ 2.23
SPTB-201ENST00000342835 NUDT16Q96DE0 195 aaKnown RBP29.01■■■□□ 2.23
SPTB-201ENST00000342835 PIK3R4Q99570 1358 aa29.01■■■□□ 2.23
SPTB-201ENST00000342835 ZNF521Q96K83 1311 aa29■■■□□ 2.23
SPTB-201ENST00000342835 RCAN3Q9UKA8 241 aa29■■■□□ 2.23
SPTB-201ENST00000342835 GGNBP2Q9H3C7 697 aa29■■■□□ 2.23
SPTB-201ENST00000342835 ITSN1Q15811 1721 aa28.98■■■□□ 2.23
SPTB-201ENST00000342835 GOLGA2Q08379 1002 aa28.98■■■□□ 2.23
SPTB-201ENST00000342835 SLC26A8Q96RN1 970 aa28.98■■■□□ 2.23
SPTB-201ENST00000342835 PTPRUQ92729 1446 aa28.98■■■□□ 2.23
SPTB-201ENST00000342835 MON2Q7Z3U7 1717 aa28.97■■■□□ 2.23
SPTB-201ENST00000342835 ZNF692Q9BU19 519 aaPredicted RBP28.97■■■□□ 2.23
SPTB-201ENST00000342835 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.97■■■□□ 2.23
SPTB-201ENST00000342835 CCDC146Q8IYE0 955 aa28.96■■■□□ 2.23
SPTB-201ENST00000342835 AKAP12Q02952 1782 aa28.96■■■□□ 2.23
SPTB-201ENST00000342835 RUNDC1Q96C34 613 aa28.95■■■□□ 2.23
SPTB-201ENST00000342835 CDCA7LQ96GN5 454 aa28.95■■■□□ 2.23
SPTB-201ENST00000342835 AMOTL2Q9Y2J4 779 aa28.95■■■□□ 2.23
SPTB-201ENST00000342835 NCBP3Q53F19 620 aaKnown RBP28.94■■■□□ 2.22
SPTB-201ENST00000342835 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
SPTB-201ENST00000342835 APAF1O14727 1248 aa28.94■■■□□ 2.22
SPTB-201ENST00000342835 TOPAZ1Q8N9V7 1692 aa28.94■■■□□ 2.22
SPTB-201ENST00000342835 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
SPTB-201ENST00000342835 RRP1P56182 461 aaKnown RBP28.91■■■□□ 2.22
SPTB-201ENST00000342835 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
SPTB-201ENST00000342835 ANKLE2Q86XL3 938 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms