RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
FRMD4A-202ENST00000342409 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
FRMD4A-202ENST00000342409 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
FRMD4A-202ENST00000342409 PTPRUQ92729 1446 aa23.43■■□□□ 1.34
FRMD4A-202ENST00000342409 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
FRMD4A-202ENST00000342409 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
FRMD4A-202ENST00000342409 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
FRMD4A-202ENST00000342409 CC2D1BQ5T0F9 858 aaKnown RBP23.42■■□□□ 1.34
FRMD4A-202ENST00000342409 CABP2Q9NPB3 220 aa23.42■■□□□ 1.34
FRMD4A-202ENST00000342409 BCANQ96GW7 911 aa23.41■■□□□ 1.34
FRMD4A-202ENST00000342409 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
FRMD4A-202ENST00000342409 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
FRMD4A-202ENST00000342409 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
FRMD4A-202ENST00000342409 SIRT1Q96EB6 747 aa23.4■■□□□ 1.34
FRMD4A-202ENST00000342409 NPC1L1Q9UHC9 1359 aa23.4■■□□□ 1.34
FRMD4A-202ENST00000342409 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.34
FRMD4A-202ENST00000342409 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.34
FRMD4A-202ENST00000342409 XRN1Q8IZH2 1706 aaKnown RBP23.39■■□□□ 1.33
FRMD4A-202ENST00000342409 ROBO2Q9HCK4 1378 aa23.39■■□□□ 1.33
FRMD4A-202ENST00000342409 BRD4O60885 1362 aaPredicted RBP23.37■■□□□ 1.33
FRMD4A-202ENST00000342409 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
FRMD4A-202ENST00000342409 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
FRMD4A-202ENST00000342409 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
FRMD4A-202ENST00000342409 CHD2O14647 1828 aaKnown RBP23.35■■□□□ 1.33
FRMD4A-202ENST00000342409 CDK19Q9BWU1 502 aa23.34■■□□□ 1.33
FRMD4A-202ENST00000342409 CD163L1Q9NR16 1453 aa23.34■■□□□ 1.33
FRMD4A-202ENST00000342409 NSD3Q9BZ95 1437 aa23.34■■□□□ 1.33
FRMD4A-202ENST00000342409 ANKRD36BQ8N2N9 1353 aa23.33■■□□□ 1.33
FRMD4A-202ENST00000342409 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.32
FRMD4A-202ENST00000342409 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
FRMD4A-202ENST00000342409 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
FRMD4A-202ENST00000342409 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
FRMD4A-202ENST00000342409 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
FRMD4A-202ENST00000342409 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
FRMD4A-202ENST00000342409 PTCH1Q13635 1447 aa23.29■■□□□ 1.32
FRMD4A-202ENST00000342409 A0A1W2PP64 1363 aa23.28■■□□□ 1.32
FRMD4A-202ENST00000342409 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
FRMD4A-202ENST00000342409 ANKLE2Q86XL3 938 aa23.28■■□□□ 1.32
FRMD4A-202ENST00000342409 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
FRMD4A-202ENST00000342409 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
FRMD4A-202ENST00000342409 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
FRMD4A-202ENST00000342409 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
FRMD4A-202ENST00000342409 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
FRMD4A-202ENST00000342409 KIF20BQ96Q89 1820 aa23.25■■□□□ 1.31
FRMD4A-202ENST00000342409 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
FRMD4A-202ENST00000342409 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
FRMD4A-202ENST00000342409 RGPD8O14715 1765 aaPredicted RBP23.23■■□□□ 1.31
FRMD4A-202ENST00000342409 ATP7BP35670 1465 aa23.22■■□□□ 1.31
FRMD4A-202ENST00000342409 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
FRMD4A-202ENST00000342409 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
FRMD4A-202ENST00000342409 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
FRMD4A-202ENST00000342409 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
FRMD4A-202ENST00000342409 PRR36Q9H6K5 1346 aa23.2■■□□□ 1.3
FRMD4A-202ENST00000342409 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
FRMD4A-202ENST00000342409 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
FRMD4A-202ENST00000342409 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
FRMD4A-202ENST00000342409 KDM4FA0A1W2PPD8 638 aa23.18■■□□□ 1.3
FRMD4A-202ENST00000342409 NALCNQ8IZF0 1738 aa23.17■■□□□ 1.3
FRMD4A-202ENST00000342409 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
FRMD4A-202ENST00000342409 KCNA6P17658 529 aa23.17■■□□□ 1.3
FRMD4A-202ENST00000342409 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
FRMD4A-202ENST00000342409 NCKAP5LQ9HCH0 1330 aa23.17■■□□□ 1.3
FRMD4A-202ENST00000342409 TERF2IPQ9NYB0 399 aa23.16■■□□□ 1.3
FRMD4A-202ENST00000342409 NSD2O96028 1365 aa23.16■■□□□ 1.3
FRMD4A-202ENST00000342409 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
FRMD4A-202ENST00000342409 FMN2Q9NZ56 1722 aa23.15■■□□□ 1.3
FRMD4A-202ENST00000342409 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
FRMD4A-202ENST00000342409 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
FRMD4A-202ENST00000342409 NRKQ7Z2Y5 1582 aa23.12■■□□□ 1.29
FRMD4A-202ENST00000342409 HDGFL2Q7Z4V5 671 aaPredicted RBP23.12■■□□□ 1.29
FRMD4A-202ENST00000342409 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
FRMD4A-202ENST00000342409 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
FRMD4A-202ENST00000342409 NKTRP30414 1462 aaKnown RBP23.11■■□□□ 1.29
FRMD4A-202ENST00000342409 ZBED9Q6R2W3 1325 aa23.11■■□□□ 1.29
FRMD4A-202ENST00000342409 FYB1O15117 783 aa23.1■■□□□ 1.29
FRMD4A-202ENST00000342409 BLMP54132 1417 aaPredicted RBP23.09■■□□□ 1.29
FRMD4A-202ENST00000342409 INSRP06213 1382 aa23.09■■□□□ 1.29
FRMD4A-202ENST00000342409 STRCP1A6NGW2 1772 aa23.08■■□□□ 1.29
FRMD4A-202ENST00000342409 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
FRMD4A-202ENST00000342409 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
FRMD4A-202ENST00000342409 GGNBP2Q9H3C7 697 aa23.06■■□□□ 1.28
FRMD4A-202ENST00000342409 MAP2P11137 1827 aaKnown RBP23.06■■□□□ 1.28
FRMD4A-202ENST00000342409 POLR3AO14802 1390 aaPredicted RBP23.06■■□□□ 1.28
FRMD4A-202ENST00000342409 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
FRMD4A-202ENST00000342409 STRCQ7RTU9 1775 aa23.05■■□□□ 1.28
FRMD4A-202ENST00000342409 LMTK3Q96Q04 1460 aa23.04■■□□□ 1.28
FRMD4A-202ENST00000342409 PLEKHG3A1L390 1219 aa23.04■■□□□ 1.28
FRMD4A-202ENST00000342409 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
FRMD4A-202ENST00000342409 ADAMTS8Q9UP79 889 aa23.03■■□□□ 1.28
FRMD4A-202ENST00000342409 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
FRMD4A-202ENST00000342409 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
FRMD4A-202ENST00000342409 HSPA2P54652 639 aa23■■□□□ 1.27
FRMD4A-202ENST00000342409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
FRMD4A-202ENST00000342409 ACEP12821 1306 aa22.99■■□□□ 1.27
FRMD4A-202ENST00000342409 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
FRMD4A-202ENST00000342409 MTHFSP49914 203 aa22.99■■□□□ 1.27
FRMD4A-202ENST00000342409 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
FRMD4A-202ENST00000342409 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
FRMD4A-202ENST00000342409 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
FRMD4A-202ENST00000342409 USP6P35125 1406 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms