RNA–Protein interactions for RNA: ENST00000342022.8

CCDC30-202, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-202ENST00000342022 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
CCDC30-202ENST00000342022 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
CCDC30-202ENST00000342022 SOX12O15370 315 aa10.47□□□□□ -0.73
CCDC30-202ENST00000342022 MORC1Q86VD1 984 aa10.47□□□□□ -0.73
CCDC30-202ENST00000342022 METP08581 1390 aa10.46□□□□□ -0.73
CCDC30-202ENST00000342022 A2ML1A8K2U0 1454 aa10.45□□□□□ -0.74
CCDC30-202ENST00000342022 WDR43Q15061 677 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC30-202ENST00000342022 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
CCDC30-202ENST00000342022 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
CCDC30-202ENST00000342022 PPLO60437 1756 aa10.45□□□□□ -0.74
CCDC30-202ENST00000342022 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
CCDC30-202ENST00000342022 NSD3Q9BZ95 1437 aa10.44□□□□□ -0.74
CCDC30-202ENST00000342022 PARD3Q8TEW0 1356 aa10.44□□□□□ -0.74
CCDC30-202ENST00000342022 IQGAP1P46940 1657 aa10.44□□□□□ -0.74
CCDC30-202ENST00000342022 YTHDC2Q9H6S0 1430 aaKnown RBP10.44□□□□□ -0.74
CCDC30-202ENST00000342022 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
CCDC30-202ENST00000342022 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
CCDC30-202ENST00000342022 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
CCDC30-202ENST00000342022 AGLP35573 1532 aa10.43□□□□□ -0.74
CCDC30-202ENST00000342022 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
CCDC30-202ENST00000342022 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
CCDC30-202ENST00000342022 ZRANB1Q9UGI0 708 aa10.42□□□□□ -0.74
CCDC30-202ENST00000342022 BRD4O60885 1362 aaPredicted RBP10.42□□□□□ -0.74
CCDC30-202ENST00000342022 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
CCDC30-202ENST00000342022 ZBED9Q6R2W3 1325 aa10.41□□□□□ -0.74
CCDC30-202ENST00000342022 MTHFSP49914 203 aa10.41□□□□□ -0.74
CCDC30-202ENST00000342022 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
CCDC30-202ENST00000342022 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC30-202ENST00000342022 ZC3H13Q5T200 1668 aaKnown RBP10.41□□□□□ -0.74
CCDC30-202ENST00000342022 PMFBP1Q8TBY8 1022 aa10.4□□□□□ -0.74
CCDC30-202ENST00000342022 TMEM2Q9UHN6 1383 aa10.4□□□□□ -0.74
CCDC30-202ENST00000342022 ASXL1Q8IXJ9 1541 aa10.4□□□□□ -0.75
CCDC30-202ENST00000342022 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
CCDC30-202ENST00000342022 LAMC1P11047 1609 aa10.39□□□□□ -0.75
CCDC30-202ENST00000342022 ALKQ9UM73 1620 aa10.39□□□□□ -0.75
CCDC30-202ENST00000342022 APAF1O14727 1248 aa10.39□□□□□ -0.75
CCDC30-202ENST00000342022 U2SURPO15042 1029 aaKnown RBP10.39□□□□□ -0.75
CCDC30-202ENST00000342022 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
CCDC30-202ENST00000342022 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
CCDC30-202ENST00000342022 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
CCDC30-202ENST00000342022 A0A1W2PP64 1363 aa10.38□□□□□ -0.75
CCDC30-202ENST00000342022 THEMISQ8N1K5 641 aaPredicted RBP10.38□□□□□ -0.75
CCDC30-202ENST00000342022 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
CCDC30-202ENST00000342022 PTPRMP28827 1452 aa10.38□□□□□ -0.75
CCDC30-202ENST00000342022 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 SPATA31D1Q6ZQQ2 1576 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 KDM5AP29375 1690 aaKnown RBP10.37□□□□□ -0.75
CCDC30-202ENST00000342022 TERF2IPQ9NYB0 399 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 HDGFL2Q7Z4V5 671 aaPredicted RBP10.37□□□□□ -0.75
CCDC30-202ENST00000342022 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 NME9Q86XW9 330 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
CCDC30-202ENST00000342022 TULP4Q9NRJ4 1543 aa10.37□□□□□ -0.75
CCDC30-202ENST00000342022 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
CCDC30-202ENST00000342022 FYB1O15117 783 aa10.36□□□□□ -0.75
CCDC30-202ENST00000342022 PLIN1O60240 522 aa10.36□□□□□ -0.75
CCDC30-202ENST00000342022 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
CCDC30-202ENST00000342022 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
CCDC30-202ENST00000342022 KCNA6P17658 529 aa10.36□□□□□ -0.75
CCDC30-202ENST00000342022 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC30-202ENST00000342022 REREQ9P2R6 1566 aa10.36□□□□□ -0.75
CCDC30-202ENST00000342022 ZFYVE9O95405 1425 aa10.35□□□□□ -0.75
CCDC30-202ENST00000342022 KIAA1210Q9ULL0 1709 aa10.35□□□□□ -0.75
CCDC30-202ENST00000342022 HSPA2P54652 639 aa10.35□□□□□ -0.75
CCDC30-202ENST00000342022 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
CCDC30-202ENST00000342022 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
CCDC30-202ENST00000342022 NUDCQ9Y266 331 aa10.34□□□□□ -0.75
CCDC30-202ENST00000342022 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
CCDC30-202ENST00000342022 SBNO2Q9Y2G9 1366 aa10.34□□□□□ -0.75
CCDC30-202ENST00000342022 NEURL4Q96JN8 1562 aa10.34□□□□□ -0.75
CCDC30-202ENST00000342022 RRS1Q15050 365 aaKnown RBP10.34□□□□□ -0.75
CCDC30-202ENST00000342022 MYOM1P52179 1685 aa10.34□□□□□ -0.75
CCDC30-202ENST00000342022 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
CCDC30-202ENST00000342022 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
CCDC30-202ENST00000342022 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
CCDC30-202ENST00000342022 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
CCDC30-202ENST00000342022 ZBTB7CA1YPR0 619 aa10.32□□□□□ -0.76
CCDC30-202ENST00000342022 ANKRD36BQ8N2N9 1353 aa10.32□□□□□ -0.76
CCDC30-202ENST00000342022 PAK3O75914 559 aaPredicted RBP10.32□□□□□ -0.76
CCDC30-202ENST00000342022 XPCQ01831 940 aaPredicted RBP10.32□□□□□ -0.76
CCDC30-202ENST00000342022 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
CCDC30-202ENST00000342022 EMILIN1Q9Y6C2 1016 aa10.32□□□□□ -0.76
CCDC30-202ENST00000342022 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
CCDC30-202ENST00000342022 HMOX1P09601 288 aa10.31□□□□□ -0.76
CCDC30-202ENST00000342022 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
CCDC30-202ENST00000342022 ABCC11Q96J66 1382 aa10.31□□□□□ -0.76
CCDC30-202ENST00000342022 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
CCDC30-202ENST00000342022 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
CCDC30-202ENST00000342022 ATAD2Q6PL18 1390 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 PPIP5K1Q6PFW1 1433 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 FER1L4A9Z1Z3 1794 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 C3P01024 1663 aa10.3□□□□□ -0.76
CCDC30-202ENST00000342022 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
CCDC30-202ENST00000342022 ACEP12821 1306 aa10.29□□□□□ -0.76
CCDC30-202ENST00000342022 RCAN3Q9UKA8 241 aa10.29□□□□□ -0.76
CCDC30-202ENST00000342022 RIMS1Q86UR5 1692 aaKnown RBP10.29□□□□□ -0.76
CCDC30-202ENST00000342022 TCP11L2Q8N4U5 519 aa10.28□□□□□ -0.76
CCDC30-202ENST00000342022 UBR1Q8IWV7 1749 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms