RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 NEUROD2Q15784 382 aa16.52■□□□□ 0.23
LINC01164-201ENST00000341866 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.23
LINC01164-201ENST00000341866 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.23
LINC01164-201ENST00000341866 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
LINC01164-201ENST00000341866 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
LINC01164-201ENST00000341866 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
LINC01164-201ENST00000341866 IDI1Q13907 227 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01164-201ENST00000341866 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 SLIT1O75093 1534 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
LINC01164-201ENST00000341866 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
LINC01164-201ENST00000341866 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
LINC01164-201ENST00000341866 PTPRMP28827 1452 aa16.48■□□□□ 0.23
LINC01164-201ENST00000341866 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
LINC01164-201ENST00000341866 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
LINC01164-201ENST00000341866 MED14O60244 1454 aa16.45■□□□□ 0.22
LINC01164-201ENST00000341866 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
LINC01164-201ENST00000341866 RRP1P56182 461 aaKnown RBP16.43■□□□□ 0.22
LINC01164-201ENST00000341866 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
LINC01164-201ENST00000341866 FBXO31Q5XUX0 539 aaPredicted RBP16.43■□□□□ 0.22
LINC01164-201ENST00000341866 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
LINC01164-201ENST00000341866 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
LINC01164-201ENST00000341866 CPS1P31327 1500 aa16.4■□□□□ 0.22
LINC01164-201ENST00000341866 TECPR2O15040 1411 aa16.4■□□□□ 0.22
LINC01164-201ENST00000341866 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
LINC01164-201ENST00000341866 TNRQ92752 1358 aa16.39■□□□□ 0.21
LINC01164-201ENST00000341866 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
LINC01164-201ENST00000341866 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
LINC01164-201ENST00000341866 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
LINC01164-201ENST00000341866 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
LINC01164-201ENST00000341866 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
LINC01164-201ENST00000341866 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
LINC01164-201ENST00000341866 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
LINC01164-201ENST00000341866 STK26Q9P289 416 aa16.38■□□□□ 0.21
LINC01164-201ENST00000341866 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
LINC01164-201ENST00000341866 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
LINC01164-201ENST00000341866 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
LINC01164-201ENST00000341866 RIMS2Q9UQ26 1411 aa16.38■□□□□ 0.21
LINC01164-201ENST00000341866 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
LINC01164-201ENST00000341866 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
LINC01164-201ENST00000341866 APAF1O14727 1248 aa16.36■□□□□ 0.21
LINC01164-201ENST00000341866 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
LINC01164-201ENST00000341866 GSE1Q14687 1217 aa16.35■□□□□ 0.21
LINC01164-201ENST00000341866 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
LINC01164-201ENST00000341866 RGS3P49796 1198 aa16.34■□□□□ 0.21
LINC01164-201ENST00000341866 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
LINC01164-201ENST00000341866 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
LINC01164-201ENST00000341866 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
LINC01164-201ENST00000341866 PARD3Q8TEW0 1356 aa16.33■□□□□ 0.2
LINC01164-201ENST00000341866 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
LINC01164-201ENST00000341866 YTHDC2Q9H6S0 1430 aaKnown RBP16.32■□□□□ 0.2
LINC01164-201ENST00000341866 ADAMTS13Q76LX8 1427 aa16.32■□□□□ 0.2
LINC01164-201ENST00000341866 XRN1Q8IZH2 1706 aaKnown RBP16.32■□□□□ 0.2
LINC01164-201ENST00000341866 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
LINC01164-201ENST00000341866 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
LINC01164-201ENST00000341866 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
LINC01164-201ENST00000341866 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
LINC01164-201ENST00000341866 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
LINC01164-201ENST00000341866 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
LINC01164-201ENST00000341866 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
LINC01164-201ENST00000341866 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
LINC01164-201ENST00000341866 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
LINC01164-201ENST00000341866 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
LINC01164-201ENST00000341866 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
LINC01164-201ENST00000341866 BCL2L13Q9BXK5 485 aa16.28■□□□□ 0.2
LINC01164-201ENST00000341866 INSRP06213 1382 aa16.28■□□□□ 0.2
LINC01164-201ENST00000341866 MLECQ14165 292 aa16.28■□□□□ 0.2
LINC01164-201ENST00000341866 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
LINC01164-201ENST00000341866 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
LINC01164-201ENST00000341866 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
LINC01164-201ENST00000341866 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.19
LINC01164-201ENST00000341866 PDE4AP27815 886 aa16.26■□□□□ 0.19
LINC01164-201ENST00000341866 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
LINC01164-201ENST00000341866 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
LINC01164-201ENST00000341866 BCAR3O75815 825 aa16.25■□□□□ 0.19
LINC01164-201ENST00000341866 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
LINC01164-201ENST00000341866 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
LINC01164-201ENST00000341866 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LINC01164-201ENST00000341866 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
LINC01164-201ENST00000341866 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
LINC01164-201ENST00000341866 STAG3Q9UJ98 1225 aa16.24■□□□□ 0.19
LINC01164-201ENST00000341866 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
LINC01164-201ENST00000341866 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
LINC01164-201ENST00000341866 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
LINC01164-201ENST00000341866 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
LINC01164-201ENST00000341866 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
LINC01164-201ENST00000341866 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
LINC01164-201ENST00000341866 ZMYND15Q9H091 742 aa16.22■□□□□ 0.19
LINC01164-201ENST00000341866 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
LINC01164-201ENST00000341866 GLIPR1L2Q4G1C9 344 aa16.22■□□□□ 0.19
LINC01164-201ENST00000341866 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
LINC01164-201ENST00000341866 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
LINC01164-201ENST00000341866 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
LINC01164-201ENST00000341866 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
LINC01164-201ENST00000341866 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.18
LINC01164-201ENST00000341866 METP08581 1390 aa16.21■□□□□ 0.18
LINC01164-201ENST00000341866 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms