RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PIK3R4Q99570 1358 aa15.07■□□□□ 0
TPM3-207ENST00000341372 NEUROD2Q15784 382 aa15.07■□□□□ 0
TPM3-207ENST00000341372 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
TPM3-207ENST00000341372 TBX22Q9Y458 520 aa15.07■□□□□ 0
TPM3-207ENST00000341372 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
TPM3-207ENST00000341372 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
TPM3-207ENST00000341372 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ 0
TPM3-207ENST00000341372 KCNA6P17658 529 aa15.05■□□□□ -0
TPM3-207ENST00000341372 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
TPM3-207ENST00000341372 XRN1Q8IZH2 1706 aaKnown RBP15.04■□□□□ -0
TPM3-207ENST00000341372 MIER1Q8N108 512 aa15.02■□□□□ -0
TPM3-207ENST00000341372 VGFO15240 615 aaPredicted RBP15.02□□□□□ -0.01
TPM3-207ENST00000341372 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
TPM3-207ENST00000341372 MYOM2P54296 1465 aa15.01□□□□□ -0.01
TPM3-207ENST00000341372 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
TPM3-207ENST00000341372 NRXN1Q9ULB1 1477 aa15.01□□□□□ -0.01
TPM3-207ENST00000341372 PRAG1Q86YV5 1406 aa15□□□□□ -0.01
TPM3-207ENST00000341372 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
TPM3-207ENST00000341372 METP08581 1390 aa14.98□□□□□ -0.01
TPM3-207ENST00000341372 TMEM94Q12767 1356 aa14.98□□□□□ -0.01
TPM3-207ENST00000341372 NCOA3Q9Y6Q9 1424 aa14.97□□□□□ -0.01
TPM3-207ENST00000341372 POLA2Q14181 598 aa14.97□□□□□ -0.01
TPM3-207ENST00000341372 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
TPM3-207ENST00000341372 ADGRF5Q8IZF2 1346 aa14.97□□□□□ -0.01
TPM3-207ENST00000341372 LAMC1P11047 1609 aa14.96□□□□□ -0.01
TPM3-207ENST00000341372 ASXL1Q8IXJ9 1541 aa14.95□□□□□ -0.02
TPM3-207ENST00000341372 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
TPM3-207ENST00000341372 KCNV2Q8TDN2 545 aa14.94□□□□□ -0.02
TPM3-207ENST00000341372 PTCH1Q13635 1447 aa14.94□□□□□ -0.02
TPM3-207ENST00000341372 UBAP1LF5GYI3 381 aa14.93□□□□□ -0.02
TPM3-207ENST00000341372 PROSER2Q86WR7 435 aaPredicted RBP14.93□□□□□ -0.02
TPM3-207ENST00000341372 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
TPM3-207ENST00000341372 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
TPM3-207ENST00000341372 TOM1O60784 492 aa14.92□□□□□ -0.02
TPM3-207ENST00000341372 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
TPM3-207ENST00000341372 TECPR2O15040 1411 aa14.91□□□□□ -0.02
TPM3-207ENST00000341372 ZC3H15Q8WU90 426 aaKnown RBP14.9□□□□□ -0.02
TPM3-207ENST00000341372 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
TPM3-207ENST00000341372 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.9□□□□□ -0.02
TPM3-207ENST00000341372 DCCP43146 1447 aa14.89□□□□□ -0.03
TPM3-207ENST00000341372 MSH6P52701 1360 aa14.89□□□□□ -0.03
TPM3-207ENST00000341372 ZMYND15Q9H091 742 aa14.88□□□□□ -0.03
TPM3-207ENST00000341372 NALCNQ8IZF0 1738 aa14.88□□□□□ -0.03
TPM3-207ENST00000341372 LRPPRCP42704 1394 aaKnown RBP14.88□□□□□ -0.03
TPM3-207ENST00000341372 ADGRB1O14514 1584 aa14.87□□□□□ -0.03
TPM3-207ENST00000341372 ADGRL3Q9HAR2 1447 aa14.87□□□□□ -0.03
TPM3-207ENST00000341372 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
TPM3-207ENST00000341372 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
TPM3-207ENST00000341372 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
TPM3-207ENST00000341372 ABCC11Q96J66 1382 aa14.86□□□□□ -0.03
TPM3-207ENST00000341372 KIAA1210Q9ULL0 1709 aa14.85□□□□□ -0.03
TPM3-207ENST00000341372 FAM135BQ49AJ0 1406 aa14.85□□□□□ -0.03
TPM3-207ENST00000341372 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
TPM3-207ENST00000341372 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
TPM3-207ENST00000341372 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
TPM3-207ENST00000341372 ARID3AQ99856 593 aa14.84□□□□□ -0.03
TPM3-207ENST00000341372 C19orf44Q9H6X5 657 aa14.84□□□□□ -0.03
TPM3-207ENST00000341372 DLC1Q96QB1 1528 aa14.83□□□□□ -0.03
TPM3-207ENST00000341372 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.03
TPM3-207ENST00000341372 ROBO1Q9Y6N7 1651 aa14.83□□□□□ -0.03
TPM3-207ENST00000341372 CFAP70Q5T0N1 1121 aa14.83□□□□□ -0.04
TPM3-207ENST00000341372 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
TPM3-207ENST00000341372 STK25O00506 426 aa14.82□□□□□ -0.04
TPM3-207ENST00000341372 CDC42BPGQ6DT37 1551 aa14.81□□□□□ -0.04
TPM3-207ENST00000341372 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
TPM3-207ENST00000341372 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
TPM3-207ENST00000341372 RIOK3O14730 519 aaKnown RBP14.8□□□□□ -0.04
TPM3-207ENST00000341372 SIRT1Q96EB6 747 aa14.8□□□□□ -0.04
TPM3-207ENST00000341372 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
TPM3-207ENST00000341372 MST1RQ04912 1400 aa14.8□□□□□ -0.04
TPM3-207ENST00000341372 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
TPM3-207ENST00000341372 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
TPM3-207ENST00000341372 ATF3P18847 181 aa14.78□□□□□ -0.04
TPM3-207ENST00000341372 HSPA1LP34931 641 aa14.77□□□□□ -0.04
TPM3-207ENST00000341372 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.04
TPM3-207ENST00000341372 L3MBTL2Q969R5 705 aa14.77□□□□□ -0.04
TPM3-207ENST00000341372 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
TPM3-207ENST00000341372 AHDC1Q5TGY3 1603 aaPredicted RBP14.76□□□□□ -0.05
TPM3-207ENST00000341372 ADGRB2O60241 1585 aa14.76□□□□□ -0.05
TPM3-207ENST00000341372 STK26Q9P289 416 aa14.76□□□□□ -0.05
TPM3-207ENST00000341372 TRPM1Q7Z4N2 1603 aa14.76□□□□□ -0.05
TPM3-207ENST00000341372 FMN2Q9NZ56 1722 aa14.74□□□□□ -0.05
TPM3-207ENST00000341372 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
TPM3-207ENST00000341372 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
TPM3-207ENST00000341372 C1orf167Q5SNV9 1468 aa14.74□□□□□ -0.05
TPM3-207ENST00000341372 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
TPM3-207ENST00000341372 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
TPM3-207ENST00000341372 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
TPM3-207ENST00000341372 COL16A1Q07092 1604 aaPredicted RBP14.73□□□□□ -0.05
TPM3-207ENST00000341372 PHLPP1O60346 1717 aa14.73□□□□□ -0.05
TPM3-207ENST00000341372 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
TPM3-207ENST00000341372 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
TPM3-207ENST00000341372 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
TPM3-207ENST00000341372 PRAM1Q96QH2 718 aa14.7□□□□□ -0.06
TPM3-207ENST00000341372 TONSLQ96HA7 1378 aa14.7□□□□□ -0.06
TPM3-207ENST00000341372 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
TPM3-207ENST00000341372 NBPF1Q3BBV0 1214 aa14.68□□□□□ -0.06
TPM3-207ENST00000341372 GPRASP1Q5JY77 1395 aa14.68□□□□□ -0.06
TPM3-207ENST00000341372 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
TPM3-207ENST00000341372 RALGAPBQ86X10 1494 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms