RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
TNC-201ENST00000341037 ERC2O15083 957 aa13.81□□□□□ -0.2
TNC-201ENST00000341037 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
TNC-201ENST00000341037 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
TNC-201ENST00000341037 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
TNC-201ENST00000341037 GAPVD1Q14C86 1478 aa13.81□□□□□ -0.2
TNC-201ENST00000341037 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
TNC-201ENST00000341037 GSE1Q14687 1217 aa13.8□□□□□ -0.2
TNC-201ENST00000341037 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
TNC-201ENST00000341037 NAP1L1P55209 391 aaKnown RBP13.8□□□□□ -0.2
TNC-201ENST00000341037 IPO7O95373 1038 aaKnown RBP13.8□□□□□ -0.2
TNC-201ENST00000341037 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
TNC-201ENST00000341037 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
TNC-201ENST00000341037 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
TNC-201ENST00000341037 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
TNC-201ENST00000341037 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
TNC-201ENST00000341037 SETQ01105 290 aaPredicted RBP13.79□□□□□ -0.2
TNC-201ENST00000341037 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
TNC-201ENST00000341037 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
TNC-201ENST00000341037 CUX1P39880 1505 aa13.78□□□□□ -0.2
TNC-201ENST00000341037 NLRP6P59044 892 aa13.78□□□□□ -0.2
TNC-201ENST00000341037 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNC-201ENST00000341037 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
TNC-201ENST00000341037 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
TNC-201ENST00000341037 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
TNC-201ENST00000341037 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
TNC-201ENST00000341037 ESCO1Q5FWF5 840 aa13.78□□□□□ -0.2
TNC-201ENST00000341037 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.2
TNC-201ENST00000341037 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
TNC-201ENST00000341037 STRN4Q9NRL3 753 aa13.77□□□□□ -0.21
TNC-201ENST00000341037 GPS2Q13227 327 aa13.76□□□□□ -0.21
TNC-201ENST00000341037 KIF6Q6ZMV9 814 aa13.76□□□□□ -0.21
TNC-201ENST00000341037 HSP90AA2PQ14568 343 aaPredicted RBP13.76□□□□□ -0.21
TNC-201ENST00000341037 FSD1Q9BTV5 496 aa13.76□□□□□ -0.21
TNC-201ENST00000341037 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
TNC-201ENST00000341037 BRMS1Q9HCU9 246 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 EPS15P42566 896 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 CCDC73Q6ZRK6 1079 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
TNC-201ENST00000341037 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
TNC-201ENST00000341037 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
TNC-201ENST00000341037 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
TNC-201ENST00000341037 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
TNC-201ENST00000341037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNC-201ENST00000341037 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
TNC-201ENST00000341037 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
TNC-201ENST00000341037 PDILTQ8N807 584 aa13.73□□□□□ -0.21
TNC-201ENST00000341037 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
TNC-201ENST00000341037 CDC45O75419 566 aa13.73□□□□□ -0.21
TNC-201ENST00000341037 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
TNC-201ENST00000341037 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNC-201ENST00000341037 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
TNC-201ENST00000341037 MTHFSP49914 203 aa13.72□□□□□ -0.21
TNC-201ENST00000341037 CCDC30Q5VVM6 783 aa13.72□□□□□ -0.21
TNC-201ENST00000341037 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
TNC-201ENST00000341037 ODF2Q5BJF6 829 aa13.72□□□□□ -0.21
TNC-201ENST00000341037 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
TNC-201ENST00000341037 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.21
TNC-201ENST00000341037 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.21
TNC-201ENST00000341037 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.21
TNC-201ENST00000341037 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
TNC-201ENST00000341037 ZFYVE27Q5T4F4 411 aa13.71□□□□□ -0.22
TNC-201ENST00000341037 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.22
TNC-201ENST00000341037 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.22
TNC-201ENST00000341037 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.22
TNC-201ENST00000341037 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.22
TNC-201ENST00000341037 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.22
TNC-201ENST00000341037 ADAMTS8Q9UP79 889 aa13.71□□□□□ -0.22
TNC-201ENST00000341037 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
TNC-201ENST00000341037 NUCB2P80303 420 aa13.7□□□□□ -0.22
TNC-201ENST00000341037 XBP1P17861 261 aa13.7□□□□□ -0.22
TNC-201ENST00000341037 PSMA5P28066 241 aa13.7□□□□□ -0.22
TNC-201ENST00000341037 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
TNC-201ENST00000341037 PLEKHO1Q53GL0 409 aaPredicted RBP13.69□□□□□ -0.22
TNC-201ENST00000341037 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
TNC-201ENST00000341037 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
TNC-201ENST00000341037 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
TNC-201ENST00000341037 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
TNC-201ENST00000341037 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
TNC-201ENST00000341037 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
TNC-201ENST00000341037 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
TNC-201ENST00000341037 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
TNC-201ENST00000341037 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
TNC-201ENST00000341037 ATP2B2Q01814 1243 aa13.67□□□□□ -0.22
TNC-201ENST00000341037 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
TNC-201ENST00000341037 FAM13BQ9NYF5 915 aa13.67□□□□□ -0.22
TNC-201ENST00000341037 SIL1Q9H173 461 aa13.67□□□□□ -0.22
TNC-201ENST00000341037 NOB1Q9ULX3 412 aaKnown RBP13.67□□□□□ -0.22
TNC-201ENST00000341037 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
TNC-201ENST00000341037 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms