RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.188e-6■□□□□ 8.4
LIN54-201ENST00000340417 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
LIN54-201ENST00000340417 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
LIN54-201ENST00000340417 VPS37DQ86XT2 251 aa16.14■□□□□ 0.17
LIN54-201ENST00000340417 TRAPPC8Q9Y2L5 1435 aa16.14■□□□□ 0.17
LIN54-201ENST00000340417 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
LIN54-201ENST00000340417 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
LIN54-201ENST00000340417 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
LIN54-201ENST00000340417 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
LIN54-201ENST00000340417 CLUAP1Q96AJ1 413 aa16.12■□□□□ 0.17
LIN54-201ENST00000340417 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
LIN54-201ENST00000340417 MTHFSP49914 203 aa16.12■□□□□ 0.17
LIN54-201ENST00000340417 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
LIN54-201ENST00000340417 NOL10Q9BSC4 688 aaKnown RBP16.12■□□□□ 0.17
LIN54-201ENST00000340417 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
LIN54-201ENST00000340417 ATP10AO60312 1499 aa16.11■□□□□ 0.17
LIN54-201ENST00000340417 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
LIN54-201ENST00000340417 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
LIN54-201ENST00000340417 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
LIN54-201ENST00000340417 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
LIN54-201ENST00000340417 MCCP23508 829 aa16.1■□□□□ 0.17
LIN54-201ENST00000340417 NCLP19338 710 aaKnown RBP16.1■□□□□ 0.17
LIN54-201ENST00000340417 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
LIN54-201ENST00000340417 BECN1Q14457 450 aa16.09■□□□□ 0.17
LIN54-201ENST00000340417 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
LIN54-201ENST00000340417 APAF1O14727 1248 aa16.09■□□□□ 0.17
LIN54-201ENST00000340417 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
LIN54-201ENST00000340417 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
LIN54-201ENST00000340417 NOS1P29475 1434 aa16.09■□□□□ 0.17
LIN54-201ENST00000340417 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.17
LIN54-201ENST00000340417 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.17
LIN54-201ENST00000340417 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.16
LIN54-201ENST00000340417 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
LIN54-201ENST00000340417 RRS1Q15050 365 aaKnown RBP16.08■□□□□ 0.16
LIN54-201ENST00000340417 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
LIN54-201ENST00000340417 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
LIN54-201ENST00000340417 GNAI1P63096 354 aa16.07■□□□□ 0.16
LIN54-201ENST00000340417 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
LIN54-201ENST00000340417 RIMS2Q9UQ26 1411 aa16.07■□□□□ 0.16
LIN54-201ENST00000340417 NAIPQ13075 1403 aa16.07■□□□□ 0.16
LIN54-201ENST00000340417 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
LIN54-201ENST00000340417 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
LIN54-201ENST00000340417 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
LIN54-201ENST00000340417 KIF7Q2M1P5 1343 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 EXOC5O00471 708 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
LIN54-201ENST00000340417 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
LIN54-201ENST00000340417 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
LIN54-201ENST00000340417 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
LIN54-201ENST00000340417 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
LIN54-201ENST00000340417 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
LIN54-201ENST00000340417 E9PSI1 815 aa16.03■□□□□ 0.16
LIN54-201ENST00000340417 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
LIN54-201ENST00000340417 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
LIN54-201ENST00000340417 CHD1O14646 1710 aa16.02■□□□□ 0.16
LIN54-201ENST00000340417 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
LIN54-201ENST00000340417 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
LIN54-201ENST00000340417 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
LIN54-201ENST00000340417 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
LIN54-201ENST00000340417 PRKRIP1Q9H875 184 aaPredicted RBP16.01■□□□□ 0.15
LIN54-201ENST00000340417 NEO1Q92859 1461 aa16.01■□□□□ 0.15
LIN54-201ENST00000340417 ZFYVE16Q7Z3T8 1539 aa16■□□□□ 0.15
LIN54-201ENST00000340417 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
LIN54-201ENST00000340417 NBPF8Q3BBV2 869 aa16■□□□□ 0.15
LIN54-201ENST00000340417 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
LIN54-201ENST00000340417 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
LIN54-201ENST00000340417 CHRNA2Q15822 529 aa15.99■□□□□ 0.15
LIN54-201ENST00000340417 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
LIN54-201ENST00000340417 TSPOAP1O95153 1857 aa15.99■□□□□ 0.15
LIN54-201ENST00000340417 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
LIN54-201ENST00000340417 CLSTN1O94985 981 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 RAD21O60216 631 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 API5Q9BZZ5 524 aaKnown RBP15.97■□□□□ 0.15
LIN54-201ENST00000340417 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 NME9Q86XW9 330 aa15.97■□□□□ 0.15
LIN54-201ENST00000340417 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
LIN54-201ENST00000340417 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
LIN54-201ENST00000340417 PLIN1O60240 522 aa15.96■□□□□ 0.15
LIN54-201ENST00000340417 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.14
LIN54-201ENST00000340417 STARD3NLO95772 234 aa15.96■□□□□ 0.14
LIN54-201ENST00000340417 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.14
LIN54-201ENST00000340417 ZPR1O75312 459 aa15.95■□□□□ 0.14
LIN54-201ENST00000340417 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
LIN54-201ENST00000340417 ACEP12821 1306 aa15.94■□□□□ 0.14
LIN54-201ENST00000340417 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
LIN54-201ENST00000340417 KCNA6P17658 529 aa15.94■□□□□ 0.14
LIN54-201ENST00000340417 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
LIN54-201ENST00000340417 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
LIN54-201ENST00000340417 PPP2R1AP30153 589 aa15.93■□□□□ 0.14
LIN54-201ENST00000340417 PTCD1O75127 700 aaKnown RBP15.93■□□□□ 0.14
LIN54-201ENST00000340417 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
LIN54-201ENST00000340417 MYL6BP14649 208 aa15.92■□□□□ 0.14
LIN54-201ENST00000340417 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms