RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
RPGR-202ENST00000339363 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
RPGR-202ENST00000339363 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
RPGR-202ENST00000339363 CBX1P83916 185 aa11.66□□□□□ -0.54
RPGR-202ENST00000339363 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
RPGR-202ENST00000339363 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
RPGR-202ENST00000339363 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
RPGR-202ENST00000339363 TTC37Q6PGP7 1564 aa11.66□□□□□ -0.54
RPGR-202ENST00000339363 XPCQ01831 940 aaPredicted RBP11.65□□□□□ -0.54
RPGR-202ENST00000339363 GBP4Q96PP9 640 aa11.65□□□□□ -0.54
RPGR-202ENST00000339363 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
RPGR-202ENST00000339363 CLUAP1Q96AJ1 413 aa11.65□□□□□ -0.54
RPGR-202ENST00000339363 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.55
RPGR-202ENST00000339363 HSP90AB1P08238 724 aaKnown RBP11.64□□□□□ -0.55
RPGR-202ENST00000339363 ZNF771Q7L3S4 317 aaPredicted RBP11.64□□□□□ -0.55
RPGR-202ENST00000339363 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
RPGR-202ENST00000339363 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
RPGR-202ENST00000339363 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
RPGR-202ENST00000339363 OFD1O75665 1012 aa11.63□□□□□ -0.55
RPGR-202ENST00000339363 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
RPGR-202ENST00000339363 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
RPGR-202ENST00000339363 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
RPGR-202ENST00000339363 MYOM1P52179 1685 aa11.62□□□□□ -0.55
RPGR-202ENST00000339363 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
RPGR-202ENST00000339363 NUP160Q12769 1436 aa11.62□□□□□ -0.55
RPGR-202ENST00000339363 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
RPGR-202ENST00000339363 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
RPGR-202ENST00000339363 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
RPGR-202ENST00000339363 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
RPGR-202ENST00000339363 ANTXR1Q9H6X2 564 aa11.61□□□□□ -0.55
RPGR-202ENST00000339363 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
RPGR-202ENST00000339363 INSRP06213 1382 aa11.61□□□□□ -0.55
RPGR-202ENST00000339363 IGSF3O75054 1194 aa11.61□□□□□ -0.55
RPGR-202ENST00000339363 RIPK4P57078 832 aa11.61□□□□□ -0.55
RPGR-202ENST00000339363 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
RPGR-202ENST00000339363 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
RPGR-202ENST00000339363 ARHGEF5Q12774 1597 aa11.6□□□□□ -0.55
RPGR-202ENST00000339363 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
RPGR-202ENST00000339363 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
RPGR-202ENST00000339363 E9PSI1 815 aa11.59□□□□□ -0.55
RPGR-202ENST00000339363 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
RPGR-202ENST00000339363 ADGRF5Q8IZF2 1346 aa11.59□□□□□ -0.55
RPGR-202ENST00000339363 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
RPGR-202ENST00000339363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.55
RPGR-202ENST00000339363 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
RPGR-202ENST00000339363 RNF17Q9BXT8 1623 aaKnown RBP11.59□□□□□ -0.55
RPGR-202ENST00000339363 UNC13BO14795 1591 aa11.59□□□□□ -0.55
RPGR-202ENST00000339363 TRAPPC8Q9Y2L5 1435 aa11.58□□□□□ -0.55
RPGR-202ENST00000339363 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.55
RPGR-202ENST00000339363 MADDQ8WXG6 1647 aa11.58□□□□□ -0.56
RPGR-202ENST00000339363 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
RPGR-202ENST00000339363 MAPK8IP3Q9UPT6 1336 aa11.57□□□□□ -0.56
RPGR-202ENST00000339363 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
RPGR-202ENST00000339363 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
RPGR-202ENST00000339363 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
RPGR-202ENST00000339363 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
RPGR-202ENST00000339363 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
RPGR-202ENST00000339363 DMTNQ08495 405 aa11.56□□□□□ -0.56
RPGR-202ENST00000339363 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
RPGR-202ENST00000339363 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
RPGR-202ENST00000339363 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
RPGR-202ENST00000339363 IQGAP3Q86VI3 1631 aa11.56□□□□□ -0.56
RPGR-202ENST00000339363 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
RPGR-202ENST00000339363 LAMC1P11047 1609 aa11.55□□□□□ -0.56
RPGR-202ENST00000339363 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
RPGR-202ENST00000339363 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
RPGR-202ENST00000339363 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
RPGR-202ENST00000339363 ATP10AO60312 1499 aa11.55□□□□□ -0.56
RPGR-202ENST00000339363 TSR2Q969E8 191 aaKnown RBP11.55□□□□□ -0.56
RPGR-202ENST00000339363 ERVK-7P63135 1459 aa11.54□□□□□ -0.56
RPGR-202ENST00000339363 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
RPGR-202ENST00000339363 GAS2L3Q86XJ1 694 aa11.54□□□□□ -0.56
RPGR-202ENST00000339363 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
RPGR-202ENST00000339363 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 MPNDQ8N594 471 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 PIK3C2GO75747 1445 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 SASS6Q6UVJ0 657 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
RPGR-202ENST00000339363 LETM1O95202 739 aaPredicted RBP11.52□□□□□ -0.56
RPGR-202ENST00000339363 KIF20AO95235 890 aa11.52□□□□□ -0.56
RPGR-202ENST00000339363 PLCB2Q00722 1185 aa11.52□□□□□ -0.56
RPGR-202ENST00000339363 PTMSP20962 102 aa11.52□□□□□ -0.57
RPGR-202ENST00000339363 KIAA2012Q0VF49 1180 aa11.52□□□□□ -0.57
RPGR-202ENST00000339363 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 GTPBP4Q9BZE4 634 aaKnown RBP11.51□□□□□ -0.57
RPGR-202ENST00000339363 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
RPGR-202ENST00000339363 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
RPGR-202ENST00000339363 TSC1Q92574 1164 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 SYNMO15061 1565 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 CEP152O94986 1710 aa11.51□□□□□ -0.57
RPGR-202ENST00000339363 TNNT3P45378 269 aaPredicted RBP11.5□□□□□ -0.57
RPGR-202ENST00000339363 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
RPGR-202ENST00000339363 FBLN1P23142 703 aa11.5□□□□□ -0.57
RPGR-202ENST00000339363 TERF1P54274 439 aa11.5□□□□□ -0.57
RPGR-202ENST00000339363 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
RPGR-202ENST00000339363 TRAK1Q9UPV9 953 aa11.5□□□□□ -0.57
RPGR-202ENST00000339363 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms