RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 MRVI1Q9Y6F6 885 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 FAM86C2PA6NEL3 165 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 SH3BGRP55822 239 aaPredicted RBP4□□□□□ -1.77
SOCS4-201ENST00000339298 CCDC24Q8N4L8 307 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 B4GALNT3Q6L9W6 998 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 BTN2A1Q7KYR7 527 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 TMEM87AQ8NBN3 555 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 GTPBP6O43824 516 aaPredicted RBP4□□□□□ -1.77
SOCS4-201ENST00000339298 OXLD1Q5BKU9 147 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 PLIN1O60240 522 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 PDE6BP35913 854 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 KIAA2012Q0VF49 1180 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 MAGEB6P1A0A0J9YX57 407 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 SSBP05455 408 aaKnown RBP eCLIP4□□□□□ -1.77
SOCS4-201ENST00000339298 CCDC102AQ96A19 550 aa4□□□□□ -1.77
SOCS4-201ENST00000339298 TMCO5BA8MYB1 307 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 NEUROD1Q13562 356 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 NLRP6P59044 892 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 TMA7Q9Y2S6 64 aaKnown RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 CCND1P24385 295 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 C8orf34Q49A92 452 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 LARP1Q6PKG0 1096 aaKnown RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 MARCH6O60337 910 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 MLLT3P42568 568 aaPredicted RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 C21orf62-AS1Q17RA5 79 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 DIEXFQ68CQ4 756 aaKnown RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 SUDS3Q9H7L9 328 aaPredicted RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 RBM27Q9P2N5 1060 aaKnown RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 TRAK2O60296 914 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 MARSP56192 900 aaKnown RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 SETQ01105 290 aaPredicted RBP3.99□□□□□ -1.77
SOCS4-201ENST00000339298 PDE3BQ13370 1112 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 ARID5BQ14865 1188 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 PHF8Q9UPP1 1060 aa3.99□□□□□ -1.77
SOCS4-201ENST00000339298 GOLIM4O00461 696 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 ZPR1O75312 459 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 TRIM37O94972 964 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 TSR1Q2NL82 804 aaKnown RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 RNF187Q5TA31 235 aaPredicted RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 KSR2Q6VAB6 950 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 MRRFQ96E11 262 aaKnown RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 SLC4A7Q9Y6M7 1214 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 VGLL3A8MV65 326 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 SKIP12755 728 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 CASC1Q6TDU7 716 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 DZIP1Q86YF9 867 aaKnown RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 PCDHB9Q9Y5E1 797 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 F6X3S4 739 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 HTATSF1O43719 755 aaKnown RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 TSPY4P0CV99 314 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 TSPY10P0CW01 314 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 ATP2B1P20020 1258 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 VPS37DQ86XT2 251 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 HELBQ8NG08 1087 aaPredicted RBP3.98□□□□□ -1.77
SOCS4-201ENST00000339298 NGLY1Q96IV0 654 aa3.98□□□□□ -1.77
SOCS4-201ENST00000339298 PPP1R15AO75807 674 aaPredicted RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 ATP2B2Q01814 1243 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 ZNF211Q13398 564 aaPredicted RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 IPO9Q96P70 1041 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 GLMNQ92990 594 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 CGNQ9P2M7 1197 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 KIF4AO95239 1232 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 PDAP1Q13442 181 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 KIAA1211Q6ZU35 1233 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 DYDC1Q8WWB3 177 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 H3BRB1 525 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 SECISBP2LQ93073 1101 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 IGFLR1Q9H665 355 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 TUT1Q9H6E5 874 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 FAM86C1Q9NVL1 165 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 CCDC181Q5TID7 509 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 IPO4Q8TEX9 1081 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 ATP6V1E2Q96A05 226 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 TSPYL1Q9H0U9 437 aa3.97□□□□□ -1.77
SOCS4-201ENST00000339298 UPF2Q9HAU5 1272 aaKnown RBP3.97□□□□□ -1.77
SOCS4-201ENST00000339298 PRMT3O60678 531 aa3.96□□□□□ -1.77
SOCS4-201ENST00000339298 GIGYF2Q6Y7W6 1299 aaKnown RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 DHX38Q92620 1227 aaKnown RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 ZNF622Q969S3 477 aaKnown RBP eCLIP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 ATG3Q9NT62 314 aa3.96□□□□□ -1.78
SOCS4-201ENST00000339298 STK10O94804 968 aaKnown RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 S100BP04271 92 aaPredicted RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 EFCAB3Q8N7B9 438 aa3.96□□□□□ -1.78
SOCS4-201ENST00000339298 SPDYE1Q8NFV5 336 aaPredicted RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 GOLGA8CPA6NN73 597 aa3.96□□□□□ -1.78
SOCS4-201ENST00000339298 ZHX3Q9H4I2 956 aa3.96□□□□□ -1.78
SOCS4-201ENST00000339298 SEC24BO95487 1268 aa3.96□□□□□ -1.78
SOCS4-201ENST00000339298 NBPF7P0C2Y1 421 aaPredicted RBP3.96□□□□□ -1.78
SOCS4-201ENST00000339298 TRIM66O15016 1216 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 RASA1P20936 1047 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 NAA30Q147X3 362 aaPredicted RBP3.95□□□□□ -1.78
SOCS4-201ENST00000339298 BICDL1Q6ZP65 573 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 INPP5FQ9Y2H2 1132 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 MCM4P33991 863 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 ZRSR2Q15696 482 aaKnown RBP3.95□□□□□ -1.78
SOCS4-201ENST00000339298 PROCA1Q8NCQ7 364 aaPredicted RBP3.95□□□□□ -1.78
SOCS4-201ENST00000339298 LRGUKQ96M69 825 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 FAM161BQ96MY7 647 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 HSP90AB2PQ58FF8 381 aa3.95□□□□□ -1.78
SOCS4-201ENST00000339298 RRP12Q5JTH9 1297 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms