RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 LRPPRCP42704 1394 aaKnown RBP15.02□□□□□ -0.01
LRP1-202ENST00000338962 AMOTL2Q9Y2J4 779 aa15.02□□□□□ -0.01
LRP1-202ENST00000338962 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
LRP1-202ENST00000338962 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
LRP1-202ENST00000338962 NEFLP07196 543 aa15.01□□□□□ -0.01
LRP1-202ENST00000338962 SIRT1Q96EB6 747 aa15.01□□□□□ -0.01
LRP1-202ENST00000338962 ASXL1Q8IXJ9 1541 aa15.01□□□□□ -0.01
LRP1-202ENST00000338962 ZBED9Q6R2W3 1325 aa15.01□□□□□ -0.01
LRP1-202ENST00000338962 PANK3Q9H999 370 aa15.01□□□□□ -0.01
LRP1-202ENST00000338962 YTHDC2Q9H6S0 1430 aaKnown RBP15.01□□□□□ -0.01
LRP1-202ENST00000338962 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
LRP1-202ENST00000338962 SLC24A1O60721 1099 aa15□□□□□ -0.01
LRP1-202ENST00000338962 TECPR2O15040 1411 aa15□□□□□ -0.01
LRP1-202ENST00000338962 ZNF335Q9H4Z2 1342 aaPredicted RBP15□□□□□ -0.01
LRP1-202ENST00000338962 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
LRP1-202ENST00000338962 FKBP8Q14318 412 aa14.97□□□□□ -0.01
LRP1-202ENST00000338962 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
LRP1-202ENST00000338962 PNISRQ8TF01 805 aaKnown RBP14.97□□□□□ -0.01
LRP1-202ENST00000338962 STK26Q9P289 416 aa14.97□□□□□ -0.01
LRP1-202ENST00000338962 NWD1Q149M9 1564 aa14.96□□□□□ -0.01
LRP1-202ENST00000338962 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
LRP1-202ENST00000338962 PTCH1Q13635 1447 aa14.96□□□□□ -0.01
LRP1-202ENST00000338962 CC2D1BQ5T0F9 858 aaKnown RBP14.95□□□□□ -0.02
LRP1-202ENST00000338962 ROBO2Q9HCK4 1378 aa14.95□□□□□ -0.02
LRP1-202ENST00000338962 FAM135BQ49AJ0 1406 aa14.95□□□□□ -0.02
LRP1-202ENST00000338962 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
LRP1-202ENST00000338962 DLC1Q96QB1 1528 aa14.94□□□□□ -0.02
LRP1-202ENST00000338962 CHD2O14647 1828 aaKnown RBP14.94□□□□□ -0.02
LRP1-202ENST00000338962 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
LRP1-202ENST00000338962 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
LRP1-202ENST00000338962 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
LRP1-202ENST00000338962 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
LRP1-202ENST00000338962 LTBP4Q8N2S1 1624 aa14.93□□□□□ -0.02
LRP1-202ENST00000338962 CPS1P31327 1500 aa14.93□□□□□ -0.02
LRP1-202ENST00000338962 PROSER2Q86WR7 435 aaPredicted RBP14.92□□□□□ -0.02
LRP1-202ENST00000338962 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
LRP1-202ENST00000338962 WAPLQ7Z5K2 1190 aa14.92□□□□□ -0.02
LRP1-202ENST00000338962 PRAM1Q96QH2 718 aa14.92□□□□□ -0.02
LRP1-202ENST00000338962 LRRC7Q96NW7 1537 aa14.9□□□□□ -0.02
LRP1-202ENST00000338962 MYOM1P52179 1685 aa14.9□□□□□ -0.02
LRP1-202ENST00000338962 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
LRP1-202ENST00000338962 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
LRP1-202ENST00000338962 POGKQ9P215 609 aa14.9□□□□□ -0.02
LRP1-202ENST00000338962 STRCP1A6NGW2 1772 aa14.89□□□□□ -0.03
LRP1-202ENST00000338962 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
LRP1-202ENST00000338962 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
LRP1-202ENST00000338962 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
LRP1-202ENST00000338962 C19orf44Q9H6X5 657 aa14.87□□□□□ -0.03
LRP1-202ENST00000338962 QRICH2Q9H0J4 1663 aa14.86□□□□□ -0.03
LRP1-202ENST00000338962 SAFB2Q14151 953 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRP1-202ENST00000338962 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
LRP1-202ENST00000338962 ADGRL3Q9HAR2 1447 aa14.84□□□□□ -0.03
LRP1-202ENST00000338962 ARHGEF28Q8N1W1 1705 aaKnown RBP14.84□□□□□ -0.03
LRP1-202ENST00000338962 SMG6Q86US8 1419 aaKnown RBP14.83□□□□□ -0.03
LRP1-202ENST00000338962 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
LRP1-202ENST00000338962 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
LRP1-202ENST00000338962 DCCP43146 1447 aa14.82□□□□□ -0.04
LRP1-202ENST00000338962 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
LRP1-202ENST00000338962 PPP2R1AP30153 589 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 MSH6P52701 1360 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 WASLO00401 505 aaPredicted RBP14.81□□□□□ -0.04
LRP1-202ENST00000338962 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
LRP1-202ENST00000338962 INSRP06213 1382 aa14.8□□□□□ -0.04
LRP1-202ENST00000338962 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
LRP1-202ENST00000338962 PUS7Q96PZ0 661 aaKnown RBP14.8□□□□□ -0.04
LRP1-202ENST00000338962 EVC2Q86UK5 1308 aa14.79□□□□□ -0.04
LRP1-202ENST00000338962 ATF3P18847 181 aa14.78□□□□□ -0.04
LRP1-202ENST00000338962 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
LRP1-202ENST00000338962 ADGRB2O60241 1585 aa14.78□□□□□ -0.04
LRP1-202ENST00000338962 CDK19Q9BWU1 502 aa14.78□□□□□ -0.04
LRP1-202ENST00000338962 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
LRP1-202ENST00000338962 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
LRP1-202ENST00000338962 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.05
LRP1-202ENST00000338962 XIRP1Q702N8 1843 aaKnown RBP14.76□□□□□ -0.05
LRP1-202ENST00000338962 CDC42BPGQ6DT37 1551 aa14.76□□□□□ -0.05
LRP1-202ENST00000338962 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
LRP1-202ENST00000338962 TULP4Q9NRJ4 1543 aa14.76□□□□□ -0.05
LRP1-202ENST00000338962 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
LRP1-202ENST00000338962 NALCNQ8IZF0 1738 aa14.75□□□□□ -0.05
LRP1-202ENST00000338962 NSD3Q9BZ95 1437 aa14.75□□□□□ -0.05
LRP1-202ENST00000338962 SLAIN2Q9P270 581 aa14.75□□□□□ -0.05
LRP1-202ENST00000338962 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
LRP1-202ENST00000338962 TOM1O60784 492 aa14.74□□□□□ -0.05
LRP1-202ENST00000338962 MST1RQ04912 1400 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 ANKARQ7Z5J8 1434 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
LRP1-202ENST00000338962 PDE3BQ13370 1112 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 PRR36Q9H6K5 1346 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 NUDT16Q96DE0 195 aaKnown RBP14.73□□□□□ -0.05
LRP1-202ENST00000338962 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
LRP1-202ENST00000338962 C1orf167Q5SNV9 1468 aa14.72□□□□□ -0.05
LRP1-202ENST00000338962 ATAD2Q6PL18 1390 aa14.71□□□□□ -0.05
LRP1-202ENST00000338962 ANKRD36BQ8N2N9 1353 aa14.71□□□□□ -0.05
LRP1-202ENST00000338962 CGNL1Q0VF96 1302 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms