RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RUNDC1Q96C34 613 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 COG3Q96JB2 828 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 PSMA5P28066 241 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 TNNT1P13805 278 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 CCDC173Q0VFZ6 552 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 NGDNQ8NEJ9 315 aaKnown RBP9.69□□□□□ -0.86
TNPO1-201ENST00000337273 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
TNPO1-201ENST00000337273 CNTLNQ9NXG0 1405 aa9.69□□□□□ -0.86
TNPO1-201ENST00000337273 RRP12Q5JTH9 1297 aaKnown RBP9.69□□□□□ -0.86
TNPO1-201ENST00000337273 ERICH2A1L162 156 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 CPLX1O14810 134 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 MCTP1Q6DN14 999 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 SPC24Q8NBT2 197 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 G3V3G9 751 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 GNAI1P63096 354 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 C22orf23Q9BZE7 217 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 TMX1Q9H3N1 280 aa9.68□□□□□ -0.86
TNPO1-201ENST00000337273 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
TNPO1-201ENST00000337273 IFIT2P09913 472 aaKnown RBP9.67□□□□□ -0.86
TNPO1-201ENST00000337273 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
TNPO1-201ENST00000337273 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
TNPO1-201ENST00000337273 XBP1P17861 261 aa9.67□□□□□ -0.86
TNPO1-201ENST00000337273 PDCP20941 246 aa9.67□□□□□ -0.86
TNPO1-201ENST00000337273 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 NOL10Q9BSC4 688 aaKnown RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 IFT57Q9NWB7 429 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 HIP1O00291 1037 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 RDXP35241 583 aaKnown RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 MYOM3Q5VTT5 1437 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 CDC45O75419 566 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 TEFQ10587 303 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 PLCD4Q9BRC7 762 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
TNPO1-201ENST00000337273 C9orf78Q9NZ63 289 aaPredicted RBP9.66□□□□□ -0.86
TNPO1-201ENST00000337273 IGSF3O75054 1194 aa9.65□□□□□ -0.86
TNPO1-201ENST00000337273 BRMS1Q9HCU9 246 aa9.65□□□□□ -0.86
TNPO1-201ENST00000337273 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.86
TNPO1-201ENST00000337273 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.86
TNPO1-201ENST00000337273 NUTM2FA1L443 756 aa9.65□□□□□ -0.87
TNPO1-201ENST00000337273 TXLNBQ8N3L3 684 aa9.65□□□□□ -0.87
TNPO1-201ENST00000337273 HNRNPMP52272 730 aaKnown RBP eCLIP9.64□□□□□ -0.879e-6■■■■□ 22.2
TNPO1-201ENST00000337273 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 SMARCE1Q969G3 411 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 CT47B1P0C2W7 299 aaPredicted RBP9.64□□□□□ -0.87
TNPO1-201ENST00000337273 CCDC7Q96M83 1385 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 FHOD3Q2V2M9 1422 aa9.64□□□□□ -0.87
TNPO1-201ENST00000337273 TRAK2O60296 914 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 UQCRHLA0A096LP55 91 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 UQCRHP07919 91 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 G3BP1Q13283 466 aaKnown RBP eCLIP9.63□□□□□ -0.879e-7■□□□□ 8
TNPO1-201ENST00000337273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.63□□□□□ -0.87
TNPO1-201ENST00000337273 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 APAF1O14727 1248 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 PDE3AQ14432 1141 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 LEKR1Q6ZMV7 388 aa9.63□□□□□ -0.87
TNPO1-201ENST00000337273 SPDYE4A6NLX3 237 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 MLECQ14165 292 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 RABEP1Q15276 862 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
TNPO1-201ENST00000337273 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 RIPK4P57078 832 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 VPS53Q5VIR6 699 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
TNPO1-201ENST00000337273 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
TNPO1-201ENST00000337273 FILIP1LQ4L180 1135 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 PDCL2Q8N4E4 241 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 CADPSQ9ULU8 1353 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 H0YHG0 523 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 DACH1Q9UI36 760 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 ANKRD1Q15327 319 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 RALYLQ86SE5 291 aaKnown RBP9.61□□□□□ -0.87
TNPO1-201ENST00000337273 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 WIZO95785 1651 aa9.61□□□□□ -0.87
TNPO1-201ENST00000337273 VPS37CA5D8V6 355 aaPredicted RBP9.6□□□□□ -0.87
TNPO1-201ENST00000337273 XPCQ01831 940 aaPredicted RBP9.6□□□□□ -0.87
TNPO1-201ENST00000337273 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
TNPO1-201ENST00000337273 MAP4K4O95819 1239 aaPredicted RBP9.6□□□□□ -0.87
TNPO1-201ENST00000337273 LUC7LQ9NQ29 371 aaKnown RBP9.6□□□□□ -0.87
TNPO1-201ENST00000337273 USP8P40818 1118 aa9.6□□□□□ -0.87
TNPO1-201ENST00000337273 CBX1P83916 185 aa9.6□□□□□ -0.87
TNPO1-201ENST00000337273 GNAI3P08754 354 aa9.6□□□□□ -0.87
TNPO1-201ENST00000337273 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.6□□□□□ -0.87
TNPO1-201ENST00000337273 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
TNPO1-201ENST00000337273 ZNF396Q96N95 335 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms