RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 DUOX2Q9NRD8 1548 aa9.11□□□□□ -0.95
EPHA3-201ENST00000336596 PRKRIP1Q9H875 184 aaPredicted RBP9.1□□□□□ -0.95
EPHA3-201ENST00000336596 NLRP2Q9NX02 1062 aa9.1□□□□□ -0.95
EPHA3-201ENST00000336596 GAS2L2Q8NHY3 880 aa9.1□□□□□ -0.95
EPHA3-201ENST00000336596 DIAPH1O60610 1272 aaKnown RBP9.09□□□□□ -0.95
EPHA3-201ENST00000336596 CCAR1Q8IX12 1150 aaKnown RBP9.09□□□□□ -0.95
EPHA3-201ENST00000336596 PTMAP06454 111 aaKnown RBP9.09□□□□□ -0.95
EPHA3-201ENST00000336596 VPS53Q5VIR6 699 aa9.09□□□□□ -0.95
EPHA3-201ENST00000336596 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
EPHA3-201ENST00000336596 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
EPHA3-201ENST00000336596 NLRP6P59044 892 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 ITPRIPQ8IWB1 547 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 WWC2Q6AWC2 1192 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 KCNH5Q8NCM2 988 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 CDK19Q9BWU1 502 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
EPHA3-201ENST00000336596 CCDC47Q96A33 483 aaKnown RBP9.08□□□□□ -0.96
EPHA3-201ENST00000336596 PIP4K2BP78356 416 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 GNL3LQ9NVN8 582 aaKnown RBP9.07□□□□□ -0.96
EPHA3-201ENST00000336596 USP35Q9P2H5 1018 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 RUFY2Q8WXA3 655 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 MFAP1P55081 439 aaKnown RBP9.07□□□□□ -0.96
EPHA3-201ENST00000336596 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 TNRQ92752 1358 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 CEP89Q96ST8 783 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 PTPRKQ15262 1439 aa9.07□□□□□ -0.96
EPHA3-201ENST00000336596 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 SLC3A2P08195 630 aaKnown RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 ABTB2Q8N961 1025 aa9.06□□□□□ -0.96
EPHA3-201ENST00000336596 TPM2P07951 284 aa9.06□□□□□ -0.96
EPHA3-201ENST00000336596 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 API5Q9BZZ5 524 aaKnown RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
EPHA3-201ENST00000336596 TOMM22Q9NS69 142 aa9.06□□□□□ -0.96
EPHA3-201ENST00000336596 C9orf78Q9NZ63 289 aaPredicted RBP9.05□□□□□ -0.96
EPHA3-201ENST00000336596 ERICH2A1L162 156 aa9.05□□□□□ -0.96
EPHA3-201ENST00000336596 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
EPHA3-201ENST00000336596 SYAP1Q96A49 352 aaPredicted RBP9.05□□□□□ -0.96
EPHA3-201ENST00000336596 SLC12A5Q9H2X9 1139 aa9.05□□□□□ -0.96
EPHA3-201ENST00000336596 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
EPHA3-201ENST00000336596 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
EPHA3-201ENST00000336596 CCDC43Q96MW1 224 aaKnown RBP9.04□□□□□ -0.96
EPHA3-201ENST00000336596 CNKSR2Q8WXI2 1034 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 ZNF652Q9Y2D9 606 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 UHRF1BP1LA0JNW5 1464 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 GNAI1P63096 354 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 SHANK2Q9UPX8 1470 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 ADGRF5Q8IZF2 1346 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 TOM1L2Q6ZVM7 507 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 RCAN3Q9UKA8 241 aa9.04□□□□□ -0.96
EPHA3-201ENST00000336596 MSH6P52701 1360 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 ABCA8O94911 1581 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 PPP4R2Q9NY27 417 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 NOS1P29475 1434 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 SLC4A10Q6U841 1118 aa9.03□□□□□ -0.96
EPHA3-201ENST00000336596 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.96
EPHA3-201ENST00000336596 WAPLQ7Z5K2 1190 aa9.02□□□□□ -0.96
EPHA3-201ENST00000336596 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.96
EPHA3-201ENST00000336596 G3BP1Q13283 466 aaKnown RBP eCLIP9.02□□□□□ -0.97
EPHA3-201ENST00000336596 AAMPQ13685 434 aa9.02□□□□□ -0.97
EPHA3-201ENST00000336596 AMOTL2Q9Y2J4 779 aa9.02□□□□□ -0.97
EPHA3-201ENST00000336596 TRDNQ13061 729 aa9.02□□□□□ -0.97
EPHA3-201ENST00000336596 RPRD2Q5VT52 1461 aaKnown RBP9.01□□□□□ -0.97
EPHA3-201ENST00000336596 NEO1Q92859 1461 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 TRIM29Q14134 588 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 E9PSI1 815 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 KIF16BQ96L93 1317 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 APAF1O14727 1248 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 ATP7AQ04656 1500 aa9.01□□□□□ -0.97
EPHA3-201ENST00000336596 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
EPHA3-201ENST00000336596 MTHFSP49914 203 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 CABP4P57796 275 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 NBPF14Q5TI25 921 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 NUDT16Q96DE0 195 aaKnown RBP9□□□□□ -0.97
EPHA3-201ENST00000336596 PRM3Q9NNZ6 103 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 TBC1D2BQ9UPU7 963 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 ATP10AO60312 1499 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 A0A087WZG4 1122 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 STRN4Q9NRL3 753 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 TMOD2Q9NZR1 351 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 DNMT1P26358 1616 aaKnown RBP9□□□□□ -0.97
EPHA3-201ENST00000336596 ERC2O15083 957 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
EPHA3-201ENST00000336596 HMOX1P09601 288 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 RNF20Q5VTR2 975 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 NGLY1Q96IV0 654 aa9□□□□□ -0.97
EPHA3-201ENST00000336596 RGS3P49796 1198 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms