RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 CPLX2Q6PUV4 134 aaKnown RBP21.96■■□□□ 1.11
SYNM-202ENST00000336292 WWC2Q6AWC2 1192 aa21.96■■□□□ 1.11
SYNM-202ENST00000336292 ZNF592Q92610 1267 aa21.96■■□□□ 1.11
SYNM-202ENST00000336292 WDR70Q9NW82 654 aa21.96■■□□□ 1.11
SYNM-202ENST00000336292 ARHGAP5Q13017 1502 aa21.95■■□□□ 1.11
SYNM-202ENST00000336292 TTLL12Q14166 644 aaPredicted RBP21.95■■□□□ 1.11
SYNM-202ENST00000336292 SIL1Q9H173 461 aa21.95■■□□□ 1.11
SYNM-202ENST00000336292 ZC3H6P61129 1189 aaKnown RBP21.95■■□□□ 1.1
SYNM-202ENST00000336292 NLRP13Q86W25 1043 aa21.95■■□□□ 1.1
SYNM-202ENST00000336292 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
SYNM-202ENST00000336292 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
SYNM-202ENST00000336292 EPS15P42566 896 aa21.94■■□□□ 1.1
SYNM-202ENST00000336292 BECN2A8MW95 431 aa21.94■■□□□ 1.1
SYNM-202ENST00000336292 PPM1FP49593 454 aaPredicted RBP21.94■■□□□ 1.1
SYNM-202ENST00000336292 PIBF1Q8WXW3 757 aa21.93■■□□□ 1.1
SYNM-202ENST00000336292 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
SYNM-202ENST00000336292 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
SYNM-202ENST00000336292 VPS37CA5D8V6 355 aaPredicted RBP21.92■■□□□ 1.1
SYNM-202ENST00000336292 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.1
SYNM-202ENST00000336292 RALYLQ86SE5 291 aaKnown RBP21.91■■□□□ 1.1
SYNM-202ENST00000336292 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
SYNM-202ENST00000336292 MAP4K4O95819 1239 aaPredicted RBP21.91■■□□□ 1.1
SYNM-202ENST00000336292 RUFY2Q8WXA3 655 aa21.9■■□□□ 1.1
SYNM-202ENST00000336292 KIF15Q9NS87 1388 aa21.9■■□□□ 1.1
SYNM-202ENST00000336292 BICD2Q8TD16 824 aa21.9■■□□□ 1.1
SYNM-202ENST00000336292 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
SYNM-202ENST00000336292 CCDC47Q96A33 483 aaKnown RBP21.9■■□□□ 1.1
SYNM-202ENST00000336292 ZKSCAN1P17029 563 aaPredicted RBP21.89■■□□□ 1.1
SYNM-202ENST00000336292 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
SYNM-202ENST00000336292 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.09
SYNM-202ENST00000336292 TPM1P09493 284 aa21.89■■□□□ 1.09
SYNM-202ENST00000336292 TTC39AQ5SRH9 613 aa21.89■■□□□ 1.09
SYNM-202ENST00000336292 PRDM11Q9NQV5 511 aa21.88■■□□□ 1.09
SYNM-202ENST00000336292 SKIDA1Q1XH10 827 aa21.88■■□□□ 1.09
SYNM-202ENST00000336292 TTLL5Q6EMB2 1281 aa21.88■■□□□ 1.09
SYNM-202ENST00000336292 RAPGEF3O95398 923 aa21.87■■□□□ 1.09
SYNM-202ENST00000336292 DEKP35659 375 aaKnown RBP21.87■■□□□ 1.09
SYNM-202ENST00000336292 MPHOSPH10O00566 681 aaKnown RBP21.87■■□□□ 1.09
SYNM-202ENST00000336292 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
SYNM-202ENST00000336292 ZHX3Q9H4I2 956 aa21.86■■□□□ 1.09
SYNM-202ENST00000336292 UBTFL1P0CB47 393 aaPredicted RBP21.86■■□□□ 1.09
SYNM-202ENST00000336292 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
SYNM-202ENST00000336292 WDR78Q5VTH9 848 aa21.85■■□□□ 1.09
SYNM-202ENST00000336292 C1orf115Q9H7X2 142 aa21.85■■□□□ 1.09
SYNM-202ENST00000336292 PHF14O94880 888 aa21.85■■□□□ 1.09
SYNM-202ENST00000336292 SPDYE4A6NLX3 237 aa21.85■■□□□ 1.09
SYNM-202ENST00000336292 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
SYNM-202ENST00000336292 CCER2I3L3R5 266 aa21.84■■□□□ 1.09
SYNM-202ENST00000336292 MATR3P43243 847 aaKnown RBP eCLIP21.84■■□□□ 1.09
SYNM-202ENST00000336292 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.08
SYNM-202ENST00000336292 MTHFSP49914 203 aa21.83■■□□□ 1.08
SYNM-202ENST00000336292 GOLGA6L3A6NEY3 463 aa21.82■■□□□ 1.08
SYNM-202ENST00000336292 USP47Q96K76 1375 aa21.82■■□□□ 1.08
SYNM-202ENST00000336292 NGLY1Q96IV0 654 aa21.82■■□□□ 1.08
SYNM-202ENST00000336292 TBC1D2BQ9UPU7 963 aa21.82■■□□□ 1.08
SYNM-202ENST00000336292 SMG6Q86US8 1419 aaKnown RBP21.82■■□□□ 1.08
SYNM-202ENST00000336292 SAFBQ15424 915 aaKnown RBP eCLIP21.82■■□□□ 1.08
SYNM-202ENST00000336292 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
SYNM-202ENST00000336292 FSD1Q9BTV5 496 aa21.81■■□□□ 1.08
SYNM-202ENST00000336292 PLEKHO1Q53GL0 409 aaPredicted RBP21.81■■□□□ 1.08
SYNM-202ENST00000336292 EXOC6Q8TAG9 804 aa21.8■■□□□ 1.08
SYNM-202ENST00000336292 ANKLE2Q86XL3 938 aa21.8■■□□□ 1.08
SYNM-202ENST00000336292 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
SYNM-202ENST00000336292 MPHOSPH8Q99549 860 aa21.8■■□□□ 1.08
SYNM-202ENST00000336292 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
SYNM-202ENST00000336292 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
SYNM-202ENST00000336292 E9PSI1 815 aa21.79■■□□□ 1.08
SYNM-202ENST00000336292 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
SYNM-202ENST00000336292 PTMSP20962 102 aa21.79■■□□□ 1.08
SYNM-202ENST00000336292 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
SYNM-202ENST00000336292 PLCD3Q8N3E9 789 aa21.78■■□□□ 1.08
SYNM-202ENST00000336292 CDK5RAP3Q96JB5 506 aa21.78■■□□□ 1.08
SYNM-202ENST00000336292 KRT18P05783 430 aaKnown RBP21.78■■□□□ 1.08
SYNM-202ENST00000336292 THEMISQ8N1K5 641 aaPredicted RBP21.78■■□□□ 1.08
SYNM-202ENST00000336292 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
SYNM-202ENST00000336292 FKBP4Q02790 459 aaKnown RBP eCLIP21.77■■□□□ 1.08
SYNM-202ENST00000336292 BRMS1Q9HCU9 246 aa21.77■■□□□ 1.08
SYNM-202ENST00000336292 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
SYNM-202ENST00000336292 BRPF1P55201 1214 aaPredicted RBP21.76■■□□□ 1.07
SYNM-202ENST00000336292 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
SYNM-202ENST00000336292 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
SYNM-202ENST00000336292 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
SYNM-202ENST00000336292 SLC4A8Q2Y0W8 1093 aa21.75■■□□□ 1.07
SYNM-202ENST00000336292 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
SYNM-202ENST00000336292 PDILTQ8N807 584 aa21.75■■□□□ 1.07
SYNM-202ENST00000336292 PANK1Q8TE04 598 aa21.75■■□□□ 1.07
SYNM-202ENST00000336292 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
SYNM-202ENST00000336292 IPO7O95373 1038 aaKnown RBP21.74■■□□□ 1.07
SYNM-202ENST00000336292 USP5P45974 858 aa21.74■■□□□ 1.07
SYNM-202ENST00000336292 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
SYNM-202ENST00000336292 SMC3Q9UQE7 1217 aa21.74■■□□□ 1.07
SYNM-202ENST00000336292 ERC2O15083 957 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 STK3Q13188 491 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 MIA2Q96PC5 1412 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 CA8P35219 290 aa21.73■■□□□ 1.07
SYNM-202ENST00000336292 RUNDC1Q96C34 613 aa21.72■■□□□ 1.07
SYNM-202ENST00000336292 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
SYNM-202ENST00000336292 ZPR1O75312 459 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms