RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 ARHGAP23Q9P227 1491 aa14.33□□□□□ -0.12
AP1S3-201ENST00000334271 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
AP1S3-201ENST00000334271 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
AP1S3-201ENST00000334271 HIRIP3Q9BW71 556 aaPredicted RBP14.32□□□□□ -0.12
AP1S3-201ENST00000334271 SETD1AO15047 1707 aaKnown RBP14.32□□□□□ -0.12
AP1S3-201ENST00000334271 TMEM2Q9UHN6 1383 aa14.31□□□□□ -0.12
AP1S3-201ENST00000334271 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
AP1S3-201ENST00000334271 ARHGEF28Q8N1W1 1705 aaKnown RBP14.31□□□□□ -0.12
AP1S3-201ENST00000334271 DIP2AQ14689 1571 aa14.31□□□□□ -0.12
AP1S3-201ENST00000334271 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
AP1S3-201ENST00000334271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
AP1S3-201ENST00000334271 SIRT1Q96EB6 747 aa14.3□□□□□ -0.12
AP1S3-201ENST00000334271 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
AP1S3-201ENST00000334271 CCDC136Q96JN2 1154 aa14.3□□□□□ -0.12
AP1S3-201ENST00000334271 RIMS1Q86UR5 1692 aaKnown RBP14.29□□□□□ -0.12
AP1S3-201ENST00000334271 QRICH2Q9H0J4 1663 aa14.29□□□□□ -0.12
AP1S3-201ENST00000334271 PLEKHG1Q9ULL1 1385 aa14.28□□□□□ -0.12
AP1S3-201ENST00000334271 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
AP1S3-201ENST00000334271 NRXN3Q9Y4C0 1643 aa14.27□□□□□ -0.12
AP1S3-201ENST00000334271 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.13
AP1S3-201ENST00000334271 ASXL1Q8IXJ9 1541 aa14.27□□□□□ -0.13
AP1S3-201ENST00000334271 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.13
AP1S3-201ENST00000334271 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
AP1S3-201ENST00000334271 TECPR2O15040 1411 aa14.26□□□□□ -0.13
AP1S3-201ENST00000334271 LRPPRCP42704 1394 aaKnown RBP14.26□□□□□ -0.13
AP1S3-201ENST00000334271 YTHDC2Q9H6S0 1430 aaKnown RBP14.26□□□□□ -0.13
AP1S3-201ENST00000334271 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
AP1S3-201ENST00000334271 NPC1L1Q9UHC9 1359 aa14.25□□□□□ -0.13
AP1S3-201ENST00000334271 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
AP1S3-201ENST00000334271 DISP3Q9P2K9 1392 aa14.24□□□□□ -0.13
AP1S3-201ENST00000334271 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
AP1S3-201ENST00000334271 ANP32EQ9BTT0 268 aa14.23□□□□□ -0.13
AP1S3-201ENST00000334271 MED14O60244 1454 aa14.23□□□□□ -0.13
AP1S3-201ENST00000334271 PTPRMP28827 1452 aa14.23□□□□□ -0.13
AP1S3-201ENST00000334271 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
AP1S3-201ENST00000334271 CPS1P31327 1500 aa14.22□□□□□ -0.13
AP1S3-201ENST00000334271 MYOM1P52179 1685 aa14.22□□□□□ -0.13
AP1S3-201ENST00000334271 RALBP1Q15311 655 aa14.22□□□□□ -0.13
AP1S3-201ENST00000334271 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.14
AP1S3-201ENST00000334271 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
AP1S3-201ENST00000334271 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
AP1S3-201ENST00000334271 AAMPQ13685 434 aa14.19□□□□□ -0.14
AP1S3-201ENST00000334271 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
AP1S3-201ENST00000334271 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
AP1S3-201ENST00000334271 TBX22Q9Y458 520 aa14.18□□□□□ -0.14
AP1S3-201ENST00000334271 ADAMTS13Q76LX8 1427 aa14.18□□□□□ -0.14
AP1S3-201ENST00000334271 ATAD2Q6PL18 1390 aa14.17□□□□□ -0.14
AP1S3-201ENST00000334271 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
AP1S3-201ENST00000334271 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
AP1S3-201ENST00000334271 PER1O15534 1290 aaPredicted RBP14.17□□□□□ -0.14
AP1S3-201ENST00000334271 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
AP1S3-201ENST00000334271 TULP4Q9NRJ4 1543 aa14.15□□□□□ -0.14
AP1S3-201ENST00000334271 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
AP1S3-201ENST00000334271 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
AP1S3-201ENST00000334271 TMEM132EQ6IEE7 984 aa14.15□□□□□ -0.14
AP1S3-201ENST00000334271 TXNDC2Q86VQ3 553 aa14.15□□□□□ -0.14
AP1S3-201ENST00000334271 INSRP06213 1382 aa14.14□□□□□ -0.15
AP1S3-201ENST00000334271 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
AP1S3-201ENST00000334271 BRD4O60885 1362 aaPredicted RBP14.13□□□□□ -0.15
AP1S3-201ENST00000334271 POGKQ9P215 609 aa14.12□□□□□ -0.15
AP1S3-201ENST00000334271 NSD2O96028 1365 aa14.12□□□□□ -0.15
AP1S3-201ENST00000334271 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
AP1S3-201ENST00000334271 MYBBP1AQ9BQG0 1328 aaKnown RBP14.12□□□□□ -0.15
AP1S3-201ENST00000334271 PANK3Q9H999 370 aa14.11□□□□□ -0.15
AP1S3-201ENST00000334271 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
AP1S3-201ENST00000334271 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
AP1S3-201ENST00000334271 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
AP1S3-201ENST00000334271 KNSTRNQ9Y448 316 aa14.11□□□□□ -0.15
AP1S3-201ENST00000334271 METP08581 1390 aa14.11□□□□□ -0.15
AP1S3-201ENST00000334271 LTKP29376 864 aa14.1□□□□□ -0.15
AP1S3-201ENST00000334271 NBR1Q14596 966 aa14.1□□□□□ -0.15
AP1S3-201ENST00000334271 ANKRD36BQ8N2N9 1353 aa14.1□□□□□ -0.15
AP1S3-201ENST00000334271 PRAM1Q96QH2 718 aa14.09□□□□□ -0.15
AP1S3-201ENST00000334271 ATP7BP35670 1465 aa14.09□□□□□ -0.15
AP1S3-201ENST00000334271 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
AP1S3-201ENST00000334271 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
AP1S3-201ENST00000334271 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
AP1S3-201ENST00000334271 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
AP1S3-201ENST00000334271 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
AP1S3-201ENST00000334271 TERF2IPQ9NYB0 399 aa14.05□□□□□ -0.16
AP1S3-201ENST00000334271 STK26Q9P289 416 aa14.05□□□□□ -0.16
AP1S3-201ENST00000334271 ARID3AQ99856 593 aa14.05□□□□□ -0.16
AP1S3-201ENST00000334271 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
AP1S3-201ENST00000334271 NWD1Q149M9 1564 aa14.04□□□□□ -0.16
AP1S3-201ENST00000334271 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
AP1S3-201ENST00000334271 TICAM2Q86XR7 235 aa14.03□□□□□ -0.16
AP1S3-201ENST00000334271 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
AP1S3-201ENST00000334271 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
AP1S3-201ENST00000334271 WASLO00401 505 aaPredicted RBP14.03□□□□□ -0.16
AP1S3-201ENST00000334271 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
AP1S3-201ENST00000334271 ADRA2BP18089 450 aa14.03□□□□□ -0.16
AP1S3-201ENST00000334271 MRS2Q9HD23 443 aa14.02□□□□□ -0.16
AP1S3-201ENST00000334271 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
AP1S3-201ENST00000334271 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
AP1S3-201ENST00000334271 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
AP1S3-201ENST00000334271 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
AP1S3-201ENST00000334271 PTPRUQ92729 1446 aa14.01□□□□□ -0.17
AP1S3-201ENST00000334271 SRPK2P78362 688 aaKnown RBP14.01□□□□□ -0.17
AP1S3-201ENST00000334271 ROBO2Q9HCK4 1378 aa14.01□□□□□ -0.17
AP1S3-201ENST00000334271 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms