RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 CAGE1Q8TC20 777 aa15.31■□□□□ 0.04
KPNA4-201ENST00000334256 ZNF76P36508 570 aa15.31■□□□□ 0.04
KPNA4-201ENST00000334256 PDILTQ8N807 584 aa15.3■□□□□ 0.04
KPNA4-201ENST00000334256 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
KPNA4-201ENST00000334256 USP5P45974 858 aa15.3■□□□□ 0.04
KPNA4-201ENST00000334256 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
KPNA4-201ENST00000334256 TRIM21P19474 475 aaKnown RBP15.3■□□□□ 0.04
KPNA4-201ENST00000334256 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
KPNA4-201ENST00000334256 DNAJC2Q99543 621 aaKnown RBP15.29■□□□□ 0.04
KPNA4-201ENST00000334256 ANO2Q9NQ90 1003 aa15.28■□□□□ 0.04
KPNA4-201ENST00000334256 CLASRPQ8N2M8 674 aaKnown RBP15.28■□□□□ 0.04
KPNA4-201ENST00000334256 CSPG5O95196 566 aa15.27■□□□□ 0.04
KPNA4-201ENST00000334256 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.04
KPNA4-201ENST00000334256 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.04
KPNA4-201ENST00000334256 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
KPNA4-201ENST00000334256 CNNM1Q9NRU3 951 aa15.27■□□□□ 0.04
KPNA4-201ENST00000334256 CENPHQ9H3R5 247 aa15.27■□□□□ 0.03
KPNA4-201ENST00000334256 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.03
KPNA4-201ENST00000334256 NF2P35240 595 aa15.27■□□□□ 0.03
KPNA4-201ENST00000334256 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.03
KPNA4-201ENST00000334256 DIAPH3Q9NSV4 1193 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 TAX1BP1Q86VP1 789 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 STK25O00506 426 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 ANAPC15P60006 121 aa15.26■□□□□ 0.03
KPNA4-201ENST00000334256 TOM1L2Q6ZVM7 507 aa15.25■□□□□ 0.03
KPNA4-201ENST00000334256 SERPINA10Q9UK55 444 aa15.25■□□□□ 0.03
KPNA4-201ENST00000334256 CCDC181Q5TID7 509 aa15.24■□□□□ 0.03
KPNA4-201ENST00000334256 DYDC1Q8WWB3 177 aa15.24■□□□□ 0.03
KPNA4-201ENST00000334256 SAFBQ15424 915 aaKnown RBP eCLIP15.24■□□□□ 0.03
KPNA4-201ENST00000334256 SSBP05455 408 aaKnown RBP eCLIP15.24■□□□□ 0.031e-10■■■□□ 15.7
KPNA4-201ENST00000334256 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
KPNA4-201ENST00000334256 COG3Q96JB2 828 aa15.23■□□□□ 0.03
KPNA4-201ENST00000334256 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
KPNA4-201ENST00000334256 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
KPNA4-201ENST00000334256 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
KPNA4-201ENST00000334256 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
KPNA4-201ENST00000334256 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
KPNA4-201ENST00000334256 PHF14O94880 888 aa15.22■□□□□ 0.03
KPNA4-201ENST00000334256 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
KPNA4-201ENST00000334256 FAM193AP78312 1265 aa15.22■□□□□ 0.03
KPNA4-201ENST00000334256 RALYLQ86SE5 291 aaKnown RBP15.22■□□□□ 0.03
KPNA4-201ENST00000334256 TICAM2Q86XR7 235 aa15.22■□□□□ 0.03
KPNA4-201ENST00000334256 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
KPNA4-201ENST00000334256 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
KPNA4-201ENST00000334256 DESP17661 470 aa15.21■□□□□ 0.03
KPNA4-201ENST00000334256 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
KPNA4-201ENST00000334256 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
KPNA4-201ENST00000334256 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
KPNA4-201ENST00000334256 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.03
KPNA4-201ENST00000334256 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
KPNA4-201ENST00000334256 HOOK1Q9UJC3 728 aaKnown RBP15.21■□□□□ 0.03
KPNA4-201ENST00000334256 NGLY1Q96IV0 654 aa15.21■□□□□ 0.03
KPNA4-201ENST00000334256 RBM10P98175 930 aaKnown RBP15.2■□□□□ 0.02
KPNA4-201ENST00000334256 PABPN1LA6NDY0 278 aaKnown RBP15.2■□□□□ 0.02
KPNA4-201ENST00000334256 ARL1P40616 181 aaPredicted RBP15.2■□□□□ 0.02
KPNA4-201ENST00000334256 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.022e-7■■□□□ 11.9
KPNA4-201ENST00000334256 BCL2L13Q9BXK5 485 aa15.19■□□□□ 0.02
KPNA4-201ENST00000334256 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
KPNA4-201ENST00000334256 SLC3A2P08195 630 aaKnown RBP15.19■□□□□ 0.02
KPNA4-201ENST00000334256 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
KPNA4-201ENST00000334256 CDR1P51861 262 aa15.19■□□□□ 0.02
KPNA4-201ENST00000334256 BICD2Q8TD16 824 aa15.19■□□□□ 0.02
KPNA4-201ENST00000334256 HSP90B2PQ58FF3 399 aa15.18■□□□□ 0.02
KPNA4-201ENST00000334256 DCTN1Q14203 1278 aa15.18■□□□□ 0.02
KPNA4-201ENST00000334256 TAF12Q16514 161 aa15.18■□□□□ 0.02
KPNA4-201ENST00000334256 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
KPNA4-201ENST00000334256 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
KPNA4-201ENST00000334256 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
KPNA4-201ENST00000334256 MPNDQ8N594 471 aa15.16■□□□□ 0.02
KPNA4-201ENST00000334256 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
KPNA4-201ENST00000334256 TNNT1P13805 278 aa15.16■□□□□ 0.02
KPNA4-201ENST00000334256 HNRNPMP52272 730 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■■□ 25
KPNA4-201ENST00000334256 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
KPNA4-201ENST00000334256 GOLGA6L10A0A0M3HER8 536 aa15.16■□□□□ 0.02
KPNA4-201ENST00000334256 GOLGA6L10A6NI86 522 aa15.16■□□□□ 0.02
KPNA4-201ENST00000334256 CCDC85AQ96PX6 553 aaPredicted RBP15.16■□□□□ 0.02
KPNA4-201ENST00000334256 XBP1P17861 261 aa15.15■□□□□ 0.02
KPNA4-201ENST00000334256 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
KPNA4-201ENST00000334256 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
KPNA4-201ENST00000334256 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
KPNA4-201ENST00000334256 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
KPNA4-201ENST00000334256 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.14■□□□□ 0.01
KPNA4-201ENST00000334256 PPP4R3AQ6IN85 833 aa15.14■□□□□ 0.01
KPNA4-201ENST00000334256 TAF3Q5VWG9 929 aa15.14■□□□□ 0.01
KPNA4-201ENST00000334256 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
KPNA4-201ENST00000334256 TBC1D2BQ9UPU7 963 aa15.13■□□□□ 0.01
KPNA4-201ENST00000334256 SSX2IPQ9Y2D8 614 aa15.13■□□□□ 0.01
KPNA4-201ENST00000334256 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
KPNA4-201ENST00000334256 ZPR1O75312 459 aa15.13■□□□□ 0.01
KPNA4-201ENST00000334256 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
KPNA4-201ENST00000334256 TMCO4Q5TGY1 634 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 ST18O60284 1047 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 FAM177A1Q8N128 213 aaPredicted RBP15.12■□□□□ 0.01
KPNA4-201ENST00000334256 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
KPNA4-201ENST00000334256 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
KPNA4-201ENST00000334256 SH3BP5O60239 455 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms