RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
SLIT3-201ENST00000332966 TEX35Q5T0J7 233 aa19.31■□□□□ 0.68
SLIT3-201ENST00000332966 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
SLIT3-201ENST00000332966 RUFY2Q8WXA3 655 aa19.31■□□□□ 0.68
SLIT3-201ENST00000332966 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
SLIT3-201ENST00000332966 ZMYND15Q9H091 742 aa19.3■□□□□ 0.68
SLIT3-201ENST00000332966 H3BQV1 296 aa19.3■□□□□ 0.68
SLIT3-201ENST00000332966 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
SLIT3-201ENST00000332966 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
SLIT3-201ENST00000332966 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
SLIT3-201ENST00000332966 CHD1LQ86WJ1 897 aa19.29■□□□□ 0.68
SLIT3-201ENST00000332966 NOB1Q9ULX3 412 aaKnown RBP19.29■□□□□ 0.68
SLIT3-201ENST00000332966 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
SLIT3-201ENST00000332966 TBC1D32Q96NH3 1257 aa19.28■□□□□ 0.68
SLIT3-201ENST00000332966 NEK4P51957 841 aa19.28■□□□□ 0.68
SLIT3-201ENST00000332966 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
SLIT3-201ENST00000332966 XRCC6P12956 609 aaKnown RBP eCLIP19.28■□□□□ 0.68
SLIT3-201ENST00000332966 C9orf84Q5VXU9 1444 aa19.28■□□□□ 0.68
SLIT3-201ENST00000332966 SF3A1Q15459 793 aaKnown RBP19.28■□□□□ 0.68
SLIT3-201ENST00000332966 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
SLIT3-201ENST00000332966 CCDC66A2RUB6 948 aa19.27■□□□□ 0.68
SLIT3-201ENST00000332966 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
SLIT3-201ENST00000332966 PRDM2Q13029 1718 aa19.27■□□□□ 0.67
SLIT3-201ENST00000332966 GPS2Q13227 327 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 CCDC34Q96HJ3 373 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 SASS6Q6UVJ0 657 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 CHMP4CQ96CF2 233 aa19.26■□□□□ 0.67
SLIT3-201ENST00000332966 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
SLIT3-201ENST00000332966 CHMP3Q9Y3E7 222 aa19.25■□□□□ 0.67
SLIT3-201ENST00000332966 PTPRGP23470 1445 aa19.25■□□□□ 0.67
SLIT3-201ENST00000332966 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
SLIT3-201ENST00000332966 BICD2Q8TD16 824 aa19.24■□□□□ 0.67
SLIT3-201ENST00000332966 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
SLIT3-201ENST00000332966 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
SLIT3-201ENST00000332966 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
SLIT3-201ENST00000332966 RARSP54136 660 aaKnown RBP19.24■□□□□ 0.67
SLIT3-201ENST00000332966 TROQ12816 1431 aaPredicted RBP19.23■□□□□ 0.67
SLIT3-201ENST00000332966 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
SLIT3-201ENST00000332966 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
SLIT3-201ENST00000332966 COG3Q96JB2 828 aa19.22■□□□□ 0.67
SLIT3-201ENST00000332966 IGHDP01880 384 aa19.21■□□□□ 0.67
SLIT3-201ENST00000332966 CFAP70Q5T0N1 1121 aa19.2■□□□□ 0.66
SLIT3-201ENST00000332966 HOMER1Q86YM7 354 aa19.2■□□□□ 0.66
SLIT3-201ENST00000332966 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
SLIT3-201ENST00000332966 ABCC5O15440 1437 aa19.2■□□□□ 0.66
SLIT3-201ENST00000332966 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 ERC2O15083 957 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 C1orf115Q9H7X2 142 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 MCM5P33992 734 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 TPD52L1Q16890 204 aaPredicted RBP19.19■□□□□ 0.66
SLIT3-201ENST00000332966 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
SLIT3-201ENST00000332966 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
SLIT3-201ENST00000332966 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
SLIT3-201ENST00000332966 RNF20Q5VTR2 975 aa19.18■□□□□ 0.66
SLIT3-201ENST00000332966 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
SLIT3-201ENST00000332966 ZNF428Q96B54 188 aa19.18■□□□□ 0.66
SLIT3-201ENST00000332966 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SLIT3-201ENST00000332966 CCAR2Q8N163 923 aaKnown RBP19.17■□□□□ 0.66
SLIT3-201ENST00000332966 PANK2Q9BZ23 570 aa19.17■□□□□ 0.66
SLIT3-201ENST00000332966 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
SLIT3-201ENST00000332966 XPCQ01831 940 aaPredicted RBP19.16■□□□□ 0.66
SLIT3-201ENST00000332966 SYCE3A1L190 88 aa19.15■□□□□ 0.66
SLIT3-201ENST00000332966 MNS1Q8NEH6 495 aa19.15■□□□□ 0.66
SLIT3-201ENST00000332966 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
SLIT3-201ENST00000332966 HMOX1P09601 288 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 CCDC192P0DO97 292 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 SSFA2P28290 1259 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 KLHL40Q2TBA0 621 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 TMEM57Q8N5G2 664 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 CCDC73Q6ZRK6 1079 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
SLIT3-201ENST00000332966 LMOD2Q6P5Q4 547 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
SLIT3-201ENST00000332966 FIBPO43427 364 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
SLIT3-201ENST00000332966 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 DYNC1I1O14576 645 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 AMPHP49418 695 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 TAF3Q5VWG9 929 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 CDK13Q14004 1512 aaKnown RBP19.13■□□□□ 0.65
SLIT3-201ENST00000332966 CCDC112Q8NEF3 446 aa19.13■□□□□ 0.65
SLIT3-201ENST00000332966 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 GPRASP1Q5JY77 1395 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 MPNDQ8N594 471 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
SLIT3-201ENST00000332966 CCDC27Q2M243 656 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 PDCP20941 246 aa19.12■□□□□ 0.65
SLIT3-201ENST00000332966 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
SLIT3-201ENST00000332966 IFIT2P09913 472 aaKnown RBP19.11■□□□□ 0.65
SLIT3-201ENST00000332966 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
SLIT3-201ENST00000332966 NAT10Q9H0A0 1025 aaKnown RBP19.11■□□□□ 0.65
SLIT3-201ENST00000332966 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
SLIT3-201ENST00000332966 RRAGDQ9NQL2 400 aaPredicted RBP19.1■□□□□ 0.65
SLIT3-201ENST00000332966 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
SLIT3-201ENST00000332966 GNAI3P08754 354 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms