RNA–Protein interactions for RNA: ENST00000329314.5

TRIM61-201, Transcript of tripartite motif containing 61, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM61, Length 1,582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61-201ENST00000329314 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
TRIM61-201ENST00000329314 PLEKHH1Q9ULM0 1364 aa25.43■■□□□ 1.66
TRIM61-201ENST00000329314 CENPBP07199 599 aaPredicted RBP25.43■■□□□ 1.66
TRIM61-201ENST00000329314 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
TRIM61-201ENST00000329314 ANKLE2Q86XL3 938 aa25.42■■□□□ 1.66
TRIM61-201ENST00000329314 KNSTRNQ9Y448 316 aa25.42■■□□□ 1.66
TRIM61-201ENST00000329314 CNGB1Q14028 1251 aaPredicted RBP25.4■■□□□ 1.66
TRIM61-201ENST00000329314 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
TRIM61-201ENST00000329314 PTPRUQ92729 1446 aa25.4■■□□□ 1.66
TRIM61-201ENST00000329314 CABP2Q9NPB3 220 aa25.39■■□□□ 1.66
TRIM61-201ENST00000329314 NPC1L1Q9UHC9 1359 aa25.39■■□□□ 1.66
TRIM61-201ENST00000329314 ATAD2Q6PL18 1390 aa25.39■■□□□ 1.65
TRIM61-201ENST00000329314 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.65
TRIM61-201ENST00000329314 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.65
TRIM61-201ENST00000329314 AMER1Q5JTC6 1135 aaPredicted RBP25.38■■□□□ 1.65
TRIM61-201ENST00000329314 ROBO2Q9HCK4 1378 aa25.37■■□□□ 1.65
TRIM61-201ENST00000329314 SRPK2P78362 688 aaKnown RBP25.37■■□□□ 1.65
TRIM61-201ENST00000329314 TMC1Q8TDI8 760 aa25.37■■□□□ 1.65
TRIM61-201ENST00000329314 SLC12A5Q9H2X9 1139 aa25.37■■□□□ 1.65
TRIM61-201ENST00000329314 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
TRIM61-201ENST00000329314 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
TRIM61-201ENST00000329314 PIK3R4Q99570 1358 aa25.36■■□□□ 1.65
TRIM61-201ENST00000329314 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
TRIM61-201ENST00000329314 CARD14Q9BXL6 1004 aa25.35■■□□□ 1.65
TRIM61-201ENST00000329314 AMOTL2Q9Y2J4 779 aa25.33■■□□□ 1.65
TRIM61-201ENST00000329314 PTCH1Q13635 1447 aa25.33■■□□□ 1.65
TRIM61-201ENST00000329314 ANKRD36BQ8N2N9 1353 aa25.33■■□□□ 1.64
TRIM61-201ENST00000329314 BRD4O60885 1362 aaPredicted RBP25.32■■□□□ 1.64
TRIM61-201ENST00000329314 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
TRIM61-201ENST00000329314 WASLO00401 505 aaPredicted RBP25.31■■□□□ 1.64
TRIM61-201ENST00000329314 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
TRIM61-201ENST00000329314 USP32Q8NFA0 1604 aa25.29■■□□□ 1.64
TRIM61-201ENST00000329314 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
TRIM61-201ENST00000329314 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
TRIM61-201ENST00000329314 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.27■■□□□ 1.64
TRIM61-201ENST00000329314 NPHP4O75161 1426 aaPredicted RBP25.27■■□□□ 1.64
TRIM61-201ENST00000329314 KDM4FA0A1W2PPD8 638 aa25.27■■□□□ 1.64
TRIM61-201ENST00000329314 CD163L1Q9NR16 1453 aa25.24■■□□□ 1.63
TRIM61-201ENST00000329314 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
TRIM61-201ENST00000329314 TERF2IPQ9NYB0 399 aa25.23■■□□□ 1.63
TRIM61-201ENST00000329314 CHD2O14647 1828 aaKnown RBP25.23■■□□□ 1.63
TRIM61-201ENST00000329314 FAM9BQ8IZU0 186 aa25.22■■□□□ 1.63
TRIM61-201ENST00000329314 CABP1Q9NZU7 370 aa25.21■■□□□ 1.63
TRIM61-201ENST00000329314 ATP7BP35670 1465 aa25.21■■□□□ 1.63
TRIM61-201ENST00000329314 KCNA6P17658 529 aa25.2■■□□□ 1.62
TRIM61-201ENST00000329314 PNISRQ8TF01 805 aaKnown RBP25.2■■□□□ 1.62
TRIM61-201ENST00000329314 CGNL1Q0VF96 1302 aa25.2■■□□□ 1.62
TRIM61-201ENST00000329314 NCKAP5LQ9HCH0 1330 aa25.2■■□□□ 1.62
TRIM61-201ENST00000329314 NSD2O96028 1365 aa25.18■■□□□ 1.62
TRIM61-201ENST00000329314 PPP2R1AP30153 589 aa25.18■■□□□ 1.62
TRIM61-201ENST00000329314 HDGFL2Q7Z4V5 671 aaPredicted RBP25.18■■□□□ 1.62
TRIM61-201ENST00000329314 NUDT16Q96DE0 195 aaKnown RBP25.18■■□□□ 1.62
TRIM61-201ENST00000329314 PPIP5K1Q6PFW1 1433 aa25.16■■□□□ 1.62
TRIM61-201ENST00000329314 CCDC61Q9Y6R9 512 aa25.16■■□□□ 1.62
TRIM61-201ENST00000329314 PRR36Q9H6K5 1346 aa25.14■■□□□ 1.61
TRIM61-201ENST00000329314 CPSF1Q10570 1443 aaKnown RBP25.13■■□□□ 1.61
TRIM61-201ENST00000329314 CDC42BPGQ6DT37 1551 aa25.12■■□□□ 1.61
TRIM61-201ENST00000329314 TOPAZ1Q8N9V7 1692 aa25.12■■□□□ 1.61
TRIM61-201ENST00000329314 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
TRIM61-201ENST00000329314 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
TRIM61-201ENST00000329314 MORC1Q86VD1 984 aa25.1■■□□□ 1.61
TRIM61-201ENST00000329314 LMTK3Q96Q04 1460 aa25.07■■□□□ 1.6
TRIM61-201ENST00000329314 AKAP12Q02952 1782 aa25.07■■□□□ 1.6
TRIM61-201ENST00000329314 ANKRD26Q9UPS8 1709 aa25.06■■□□□ 1.6
TRIM61-201ENST00000329314 PLEKHG3A1L390 1219 aa25.06■■□□□ 1.6
TRIM61-201ENST00000329314 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
TRIM61-201ENST00000329314 FYB1O15117 783 aa25.05■■□□□ 1.6
TRIM61-201ENST00000329314 ITSN1Q15811 1721 aa25.05■■□□□ 1.6
TRIM61-201ENST00000329314 MON2Q7Z3U7 1717 aa25.05■■□□□ 1.6
TRIM61-201ENST00000329314 INSRP06213 1382 aa25.05■■□□□ 1.6
TRIM61-201ENST00000329314 ZNF692Q9BU19 519 aaPredicted RBP25.05■■□□□ 1.6
TRIM61-201ENST00000329314 KIF20BQ96Q89 1820 aa25.04■■□□□ 1.6
TRIM61-201ENST00000329314 ANKARQ7Z5J8 1434 aa25.04■■□□□ 1.6
TRIM61-201ENST00000329314 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
TRIM61-201ENST00000329314 HSPA2P54652 639 aa25.03■■□□□ 1.6
TRIM61-201ENST00000329314 FMN2Q9NZ56 1722 aa25.03■■□□□ 1.6
TRIM61-201ENST00000329314 ADGRL3Q9HAR2 1447 aa25.01■■□□□ 1.59
TRIM61-201ENST00000329314 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
TRIM61-201ENST00000329314 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
TRIM61-201ENST00000329314 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
TRIM61-201ENST00000329314 NUTM2FA1L443 756 aa25■■□□□ 1.59
TRIM61-201ENST00000329314 ZBED9Q6R2W3 1325 aa25■■□□□ 1.59
TRIM61-201ENST00000329314 ACEP12821 1306 aa24.99■■□□□ 1.59
TRIM61-201ENST00000329314 TNNT2P45379 298 aaPredicted RBP24.97■■□□□ 1.59
TRIM61-201ENST00000329314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.97■■□□□ 1.59
TRIM61-201ENST00000329314 RGPD8O14715 1765 aaPredicted RBP24.96■■□□□ 1.59
TRIM61-201ENST00000329314 NRKQ7Z2Y5 1582 aa24.96■■□□□ 1.59
TRIM61-201ENST00000329314 STRCQ7RTU9 1775 aa24.95■■□□□ 1.58
TRIM61-201ENST00000329314 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.58
TRIM61-201ENST00000329314 USP6P35125 1406 aa24.94■■□□□ 1.58
TRIM61-201ENST00000329314 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
TRIM61-201ENST00000329314 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
TRIM61-201ENST00000329314 MTHFSP49914 203 aa24.93■■□□□ 1.58
TRIM61-201ENST00000329314 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
TRIM61-201ENST00000329314 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
TRIM61-201ENST00000329314 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
TRIM61-201ENST00000329314 SSH2Q76I76 1423 aa24.91■■□□□ 1.58
TRIM61-201ENST00000329314 TTC21BQ7Z4L5 1316 aa24.9■■□□□ 1.58
TRIM61-201ENST00000329314 NME9Q86XW9 330 aa24.9■■□□□ 1.58
TRIM61-201ENST00000329314 STRCP1A6NGW2 1772 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms