RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
TOP1MT-201ENST00000329245 RALBP1Q15311 655 aa29.58■■■□□ 2.33
TOP1MT-201ENST00000329245 PLEKHH1Q9ULM0 1364 aa29.58■■■□□ 2.33
TOP1MT-201ENST00000329245 SIRT1Q96EB6 747 aa29.57■■■□□ 2.32
TOP1MT-201ENST00000329245 CC2D1BQ5T0F9 858 aaKnown RBP29.56■■■□□ 2.32
TOP1MT-201ENST00000329245 TECPR2O15040 1411 aa29.55■■■□□ 2.32
TOP1MT-201ENST00000329245 SLC12A5Q9H2X9 1139 aa29.55■■■□□ 2.32
TOP1MT-201ENST00000329245 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
TOP1MT-201ENST00000329245 MRS2Q9HD23 443 aa29.54■■■□□ 2.32
TOP1MT-201ENST00000329245 FAM135BQ49AJ0 1406 aa29.53■■■□□ 2.32
TOP1MT-201ENST00000329245 CDK19Q9BWU1 502 aa29.53■■■□□ 2.32
TOP1MT-201ENST00000329245 KNDC1Q76NI1 1749 aa29.51■■■□□ 2.31
TOP1MT-201ENST00000329245 AMOTL2Q9Y2J4 779 aa29.51■■■□□ 2.31
TOP1MT-201ENST00000329245 CPS1P31327 1500 aa29.5■■■□□ 2.31
TOP1MT-201ENST00000329245 DIP2AQ14689 1571 aa29.5■■■□□ 2.31
TOP1MT-201ENST00000329245 MYBBP1AQ9BQG0 1328 aaKnown RBP29.49■■■□□ 2.31
TOP1MT-201ENST00000329245 ROBO2Q9HCK4 1378 aa29.49■■■□□ 2.31
TOP1MT-201ENST00000329245 PTPRUQ92729 1446 aa29.49■■■□□ 2.31
TOP1MT-201ENST00000329245 PARD3Q8TEW0 1356 aa29.48■■■□□ 2.31
TOP1MT-201ENST00000329245 CARD14Q9BXL6 1004 aa29.48■■■□□ 2.31
TOP1MT-201ENST00000329245 ATAD2Q6PL18 1390 aa29.48■■■□□ 2.31
TOP1MT-201ENST00000329245 AMER1Q5JTC6 1135 aaPredicted RBP29.47■■■□□ 2.31
TOP1MT-201ENST00000329245 WASLO00401 505 aaPredicted RBP29.44■■■□□ 2.3
TOP1MT-201ENST00000329245 NINLQ9Y2I6 1382 aa29.43■■■□□ 2.3
TOP1MT-201ENST00000329245 KDM4FA0A1W2PPD8 638 aa29.43■■■□□ 2.3
TOP1MT-201ENST00000329245 PIK3R4Q99570 1358 aa29.4■■■□□ 2.3
TOP1MT-201ENST00000329245 FAM9BQ8IZU0 186 aa29.4■■■□□ 2.3
TOP1MT-201ENST00000329245 ANKRD36BQ8N2N9 1353 aa29.4■■■□□ 2.3
TOP1MT-201ENST00000329245 NPC1L1Q9UHC9 1359 aa29.39■■■□□ 2.3
TOP1MT-201ENST00000329245 NSD3Q9BZ95 1437 aa29.39■■■□□ 2.3
TOP1MT-201ENST00000329245 NCKAP5LQ9HCH0 1330 aa29.38■■■□□ 2.29
TOP1MT-201ENST00000329245 NLRP13Q86W25 1043 aa29.38■■■□□ 2.29
TOP1MT-201ENST00000329245 NPHP4O75161 1426 aaPredicted RBP29.37■■■□□ 2.29
TOP1MT-201ENST00000329245 CABP1Q9NZU7 370 aa29.37■■■□□ 2.29
TOP1MT-201ENST00000329245 BRD4O60885 1362 aaPredicted RBP29.36■■■□□ 2.29
TOP1MT-201ENST00000329245 TERF2IPQ9NYB0 399 aa29.36■■■□□ 2.29
TOP1MT-201ENST00000329245 PTCH1Q13635 1447 aa29.36■■■□□ 2.29
TOP1MT-201ENST00000329245 KCNA6P17658 529 aa29.35■■■□□ 2.29
TOP1MT-201ENST00000329245 HDGFL2Q7Z4V5 671 aaPredicted RBP29.32■■■□□ 2.28
TOP1MT-201ENST00000329245 A0A1W2PP64 1363 aa29.32■■■□□ 2.28
TOP1MT-201ENST00000329245 NUDT16Q96DE0 195 aaKnown RBP29.32■■■□□ 2.28
TOP1MT-201ENST00000329245 CGNL1Q0VF96 1302 aa29.31■■■□□ 2.28
TOP1MT-201ENST00000329245 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.3■■■□□ 2.28
TOP1MT-201ENST00000329245 XRN1Q8IZH2 1706 aaKnown RBP29.29■■■□□ 2.28
TOP1MT-201ENST00000329245 PPP2R1AP30153 589 aa29.28■■■□□ 2.28
TOP1MT-201ENST00000329245 PNISRQ8TF01 805 aaKnown RBP29.28■■■□□ 2.28
TOP1MT-201ENST00000329245 CCDC61Q9Y6R9 512 aa29.28■■■□□ 2.28
TOP1MT-201ENST00000329245 ADGRB2O60241 1585 aa29.26■■■□□ 2.27
TOP1MT-201ENST00000329245 CD163L1Q9NR16 1453 aa29.26■■■□□ 2.27
TOP1MT-201ENST00000329245 HNRNPUQ00839 825 aaKnown RBP eCLIP29.26■■■□□ 2.27
TOP1MT-201ENST00000329245 PPIP5K1Q6PFW1 1433 aa29.26■■■□□ 2.27
TOP1MT-201ENST00000329245 MORC1Q86VD1 984 aa29.24■■■□□ 2.27
TOP1MT-201ENST00000329245 HSPA2P54652 639 aa29.24■■■□□ 2.27
TOP1MT-201ENST00000329245 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
TOP1MT-201ENST00000329245 NUTM2FA1L443 756 aa29.23■■■□□ 2.27
TOP1MT-201ENST00000329245 CHD2O14647 1828 aaKnown RBP29.23■■■□□ 2.27
TOP1MT-201ENST00000329245 USP32Q8NFA0 1604 aa29.22■■■□□ 2.27
TOP1MT-201ENST00000329245 PRR36Q9H6K5 1346 aa29.22■■■□□ 2.27
TOP1MT-201ENST00000329245 ATP7BP35670 1465 aa29.21■■■□□ 2.27
TOP1MT-201ENST00000329245 NSD2O96028 1365 aa29.19■■■□□ 2.26
TOP1MT-201ENST00000329245 TNNT2P45379 298 aaPredicted RBP29.17■■■□□ 2.26
TOP1MT-201ENST00000329245 RBM33Q96EV2 1170 aaKnown RBP29.15■■■□□ 2.26
TOP1MT-201ENST00000329245 GTF3C3Q9Y5Q9 886 aa29.15■■■□□ 2.26
TOP1MT-201ENST00000329245 FYB1O15117 783 aa29.14■■■□□ 2.26
TOP1MT-201ENST00000329245 GGNBP2Q9H3C7 697 aa29.14■■■□□ 2.26
TOP1MT-201ENST00000329245 CPSF1Q10570 1443 aaKnown RBP29.14■■■□□ 2.26
TOP1MT-201ENST00000329245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.13■■■□□ 2.25
TOP1MT-201ENST00000329245 ZNF692Q9BU19 519 aaPredicted RBP29.13■■■□□ 2.25
TOP1MT-201ENST00000329245 LMTK3Q96Q04 1460 aa29.12■■■□□ 2.25
TOP1MT-201ENST00000329245 CDC42BPGQ6DT37 1551 aa29.1■■■□□ 2.25
TOP1MT-201ENST00000329245 PLEKHG3A1L390 1219 aa29.1■■■□□ 2.25
TOP1MT-201ENST00000329245 C14orf37Q86TY3 774 aa29.09■■■□□ 2.25
TOP1MT-201ENST00000329245 ACEP12821 1306 aa29.08■■■□□ 2.25
TOP1MT-201ENST00000329245 EDC4Q6P2E9 1401 aaKnown RBP29.08■■■□□ 2.25
TOP1MT-201ENST00000329245 PROSER2Q86WR7 435 aaPredicted RBP29.07■■■□□ 2.24
TOP1MT-201ENST00000329245 WDR43Q15061 677 aaKnown RBP eCLIP29.05■■■□□ 2.24
TOP1MT-201ENST00000329245 PMFBP1Q8TBY8 1022 aa29.05■■■□□ 2.24
TOP1MT-201ENST00000329245 TOPAZ1Q8N9V7 1692 aa29.05■■■□□ 2.24
TOP1MT-201ENST00000329245 NWD1Q149M9 1564 aa29.05■■■□□ 2.24
TOP1MT-201ENST00000329245 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
TOP1MT-201ENST00000329245 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
TOP1MT-201ENST00000329245 MTHFSP49914 203 aa29.02■■■□□ 2.24
TOP1MT-201ENST00000329245 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
TOP1MT-201ENST00000329245 ITSN1Q15811 1721 aa29.02■■■□□ 2.24
TOP1MT-201ENST00000329245 NALCNQ8IZF0 1738 aa29.02■■■□□ 2.24
TOP1MT-201ENST00000329245 NKTRP30414 1462 aaKnown RBP29.01■■■□□ 2.23
TOP1MT-201ENST00000329245 ZBED9Q6R2W3 1325 aa29■■■□□ 2.23
TOP1MT-201ENST00000329245 NME9Q86XW9 330 aa29■■■□□ 2.23
TOP1MT-201ENST00000329245 ADAMTS8Q9UP79 889 aa29■■■□□ 2.23
TOP1MT-201ENST00000329245 POLR3AO14802 1390 aaPredicted RBP29■■■□□ 2.23
TOP1MT-201ENST00000329245 AKAP12Q02952 1782 aa29■■■□□ 2.23
TOP1MT-201ENST00000329245 KIF20BQ96Q89 1820 aa28.99■■■□□ 2.23
TOP1MT-201ENST00000329245 MON2Q7Z3U7 1717 aa28.98■■■□□ 2.23
TOP1MT-201ENST00000329245 FMN2Q9NZ56 1722 aa28.98■■■□□ 2.23
TOP1MT-201ENST00000329245 CFAP53Q96M91 514 aa28.97■■■□□ 2.23
TOP1MT-201ENST00000329245 SENP3-EIF4A1A0A087X0R7 540 aa28.97■■■□□ 2.23
TOP1MT-201ENST00000329245 ANKRD26Q9UPS8 1709 aa28.96■■■□□ 2.23
TOP1MT-201ENST00000329245 TTC21BQ7Z4L5 1316 aa28.96■■■□□ 2.23
TOP1MT-201ENST00000329245 RGPD8O14715 1765 aaPredicted RBP28.96■■■□□ 2.23
TOP1MT-201ENST00000329245 USP6P35125 1406 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms