RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
NPIPA1-201ENST00000328085 PLCH2O75038 1416 aa11.68□□□□□ -0.54
NPIPA1-201ENST00000328085 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
NPIPA1-201ENST00000328085 POLR1AO95602 1720 aaPredicted RBP11.67□□□□□ -0.54
NPIPA1-201ENST00000328085 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
NPIPA1-201ENST00000328085 ABCB7O75027 752 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 PHF14O94880 888 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 MCCP23508 829 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 MCM4P33991 863 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
NPIPA1-201ENST00000328085 GABPB1Q06547 395 aaPredicted RBP11.65□□□□□ -0.54
NPIPA1-201ENST00000328085 NBPF1Q3BBV0 1214 aa11.65□□□□□ -0.54
NPIPA1-201ENST00000328085 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 UQCRHLA0A096LP55 91 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 UQCRHP07919 91 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
NPIPA1-201ENST00000328085 CTR9Q6PD62 1173 aa11.63□□□□□ -0.55
NPIPA1-201ENST00000328085 FEZ1Q99689 392 aa11.63□□□□□ -0.55
NPIPA1-201ENST00000328085 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 MYOM3Q5VTT5 1437 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 GTF2F1P35269 517 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 RALBP1Q15311 655 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
NPIPA1-201ENST00000328085 NPATQ14207 1427 aa11.61□□□□□ -0.55
NPIPA1-201ENST00000328085 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
NPIPA1-201ENST00000328085 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
NPIPA1-201ENST00000328085 HDAC5Q9UQL6 1122 aa11.61□□□□□ -0.55
NPIPA1-201ENST00000328085 ZNF518AQ6AHZ1 1483 aa11.61□□□□□ -0.55
NPIPA1-201ENST00000328085 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 ROCK2O75116 1388 aaKnown RBP11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 TRAK2O60296 914 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 PANK2Q9BZ23 570 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 CHMP5Q9NZZ3 219 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 CALCOCO1Q9P1Z2 691 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 AGLP35573 1532 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
NPIPA1-201ENST00000328085 REREQ9P2R6 1566 aa11.59□□□□□ -0.55
NPIPA1-201ENST00000328085 PSEN1P49768 467 aa11.59□□□□□ -0.55
NPIPA1-201ENST00000328085 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
NPIPA1-201ENST00000328085 CPS1P31327 1500 aa11.59□□□□□ -0.55
NPIPA1-201ENST00000328085 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
NPIPA1-201ENST00000328085 SHANK2Q9UPX8 1470 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 APPP05067 770 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 TIGD1Q96MW7 591 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 KIAA1107Q9UPP5 1409 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 KDM5CP41229 1560 aa11.58□□□□□ -0.56
NPIPA1-201ENST00000328085 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
NPIPA1-201ENST00000328085 MYRIPQ8NFW9 859 aa11.57□□□□□ -0.56
NPIPA1-201ENST00000328085 R3HCC1Q9Y3T6 440 aaKnown RBP11.57□□□□□ -0.56
NPIPA1-201ENST00000328085 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
NPIPA1-201ENST00000328085 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 CDK13Q14004 1512 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 TULP2O00295 520 aa11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 SUPT6HQ7KZ85 1726 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
NPIPA1-201ENST00000328085 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
NPIPA1-201ENST00000328085 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
NPIPA1-201ENST00000328085 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
NPIPA1-201ENST00000328085 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
NPIPA1-201ENST00000328085 MLH3Q9UHC1 1453 aa11.55□□□□□ -0.56
NPIPA1-201ENST00000328085 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
NPIPA1-201ENST00000328085 CLSTN1O94985 981 aa11.54□□□□□ -0.56
NPIPA1-201ENST00000328085 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
NPIPA1-201ENST00000328085 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
NPIPA1-201ENST00000328085 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 ARHGAP5Q13017 1502 aa11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 EIF3AQ14152 1382 aaKnown RBP11.53□□□□□ -0.56
NPIPA1-201ENST00000328085 ARHGAP31Q2M1Z3 1444 aa11.52□□□□□ -0.56
NPIPA1-201ENST00000328085 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
NPIPA1-201ENST00000328085 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 SYCP1Q15431 976 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 PRDM10Q9NQV6 1147 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 ZKSCAN5Q9Y2L8 839 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms