RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 PRAM1Q96QH2 718 aa15.51■□□□□ 0.07
CTDSPL-202ENST00000310189 DLC1Q96QB1 1528 aa15.5■□□□□ 0.07
CTDSPL-202ENST00000310189 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
CTDSPL-202ENST00000310189 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
CTDSPL-202ENST00000310189 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
CTDSPL-202ENST00000310189 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
CTDSPL-202ENST00000310189 SAFB2Q14151 953 aaKnown RBP eCLIP15.49■□□□□ 0.07
CTDSPL-202ENST00000310189 SIRT1Q96EB6 747 aa15.48■□□□□ 0.07
CTDSPL-202ENST00000310189 SRPK2P78362 688 aaKnown RBP15.47■□□□□ 0.07
CTDSPL-202ENST00000310189 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
CTDSPL-202ENST00000310189 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
CTDSPL-202ENST00000310189 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
CTDSPL-202ENST00000310189 PTPRUQ92729 1446 aa15.46■□□□□ 0.07
CTDSPL-202ENST00000310189 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.06
CTDSPL-202ENST00000310189 MINK1Q8N4C8 1332 aaPredicted RBP15.45■□□□□ 0.06
CTDSPL-202ENST00000310189 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
CTDSPL-202ENST00000310189 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CTDSPL-202ENST00000310189 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
CTDSPL-202ENST00000310189 ATAD2Q6PL18 1390 aa15.45■□□□□ 0.06
CTDSPL-202ENST00000310189 TECPR2O15040 1411 aa15.44■□□□□ 0.06
CTDSPL-202ENST00000310189 FAM135BQ49AJ0 1406 aa15.44■□□□□ 0.06
CTDSPL-202ENST00000310189 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
CTDSPL-202ENST00000310189 CPS1P31327 1500 aa15.43■□□□□ 0.06
CTDSPL-202ENST00000310189 MYOM1P52179 1685 aa15.42■□□□□ 0.06
CTDSPL-202ENST00000310189 PTCH1Q13635 1447 aa15.42■□□□□ 0.06
CTDSPL-202ENST00000310189 KCNA6P17658 529 aa15.42■□□□□ 0.06
CTDSPL-202ENST00000310189 XRN1Q8IZH2 1706 aaKnown RBP15.42■□□□□ 0.06
CTDSPL-202ENST00000310189 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
CTDSPL-202ENST00000310189 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
CTDSPL-202ENST00000310189 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
CTDSPL-202ENST00000310189 CDK19Q9BWU1 502 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 CABP2Q9NPB3 220 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 TERF2IPQ9NYB0 399 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 TULP4Q9NRJ4 1543 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 NPC1L1Q9UHC9 1359 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
CTDSPL-202ENST00000310189 PARD3Q8TEW0 1356 aa15.39■□□□□ 0.05
CTDSPL-202ENST00000310189 PLEKHH1Q9ULM0 1364 aa15.39■□□□□ 0.05
CTDSPL-202ENST00000310189 CHD2O14647 1828 aaKnown RBP15.39■□□□□ 0.05
CTDSPL-202ENST00000310189 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
CTDSPL-202ENST00000310189 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
CTDSPL-202ENST00000310189 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
CTDSPL-202ENST00000310189 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
CTDSPL-202ENST00000310189 ANKRD36BQ8N2N9 1353 aa15.37■□□□□ 0.05
CTDSPL-202ENST00000310189 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
CTDSPL-202ENST00000310189 ZNF335Q9H4Z2 1342 aaPredicted RBP15.36■□□□□ 0.05
CTDSPL-202ENST00000310189 WASLO00401 505 aaPredicted RBP15.36■□□□□ 0.05
CTDSPL-202ENST00000310189 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL-202ENST00000310189 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL-202ENST00000310189 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
CTDSPL-202ENST00000310189 C14orf37Q86TY3 774 aa15.33■□□□□ 0.05
CTDSPL-202ENST00000310189 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.04
CTDSPL-202ENST00000310189 NSD2O96028 1365 aa15.33■□□□□ 0.04
CTDSPL-202ENST00000310189 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
CTDSPL-202ENST00000310189 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
CTDSPL-202ENST00000310189 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
CTDSPL-202ENST00000310189 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
CTDSPL-202ENST00000310189 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
CTDSPL-202ENST00000310189 TMEM94Q12767 1356 aa15.3■□□□□ 0.04
CTDSPL-202ENST00000310189 USP32Q8NFA0 1604 aa15.3■□□□□ 0.04
CTDSPL-202ENST00000310189 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
CTDSPL-202ENST00000310189 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.3■□□□□ 0.04
CTDSPL-202ENST00000310189 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
CTDSPL-202ENST00000310189 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
CTDSPL-202ENST00000310189 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
CTDSPL-202ENST00000310189 ADGRB2O60241 1585 aa15.29■□□□□ 0.04
CTDSPL-202ENST00000310189 ATP7BP35670 1465 aa15.29■□□□□ 0.04
CTDSPL-202ENST00000310189 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
CTDSPL-202ENST00000310189 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
CTDSPL-202ENST00000310189 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
CTDSPL-202ENST00000310189 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
CTDSPL-202ENST00000310189 LRRC7Q96NW7 1537 aa15.27■□□□□ 0.04
CTDSPL-202ENST00000310189 NALCNQ8IZF0 1738 aa15.27■□□□□ 0.04
CTDSPL-202ENST00000310189 A0A1W2PP64 1363 aa15.27■□□□□ 0.03
CTDSPL-202ENST00000310189 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.03
CTDSPL-202ENST00000310189 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.03
CTDSPL-202ENST00000310189 CDC42BPGQ6DT37 1551 aa15.25■□□□□ 0.03
CTDSPL-202ENST00000310189 MSH6P52701 1360 aa15.25■□□□□ 0.03
CTDSPL-202ENST00000310189 CFAP53Q96M91 514 aa15.24■□□□□ 0.03
CTDSPL-202ENST00000310189 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
CTDSPL-202ENST00000310189 LTBP4Q8N2S1 1624 aa15.23■□□□□ 0.03
CTDSPL-202ENST00000310189 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
CTDSPL-202ENST00000310189 ATF3P18847 181 aa15.22■□□□□ 0.03
CTDSPL-202ENST00000310189 DCCP43146 1447 aa15.21■□□□□ 0.03
CTDSPL-202ENST00000310189 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
CTDSPL-202ENST00000310189 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
CTDSPL-202ENST00000310189 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 ANKARQ7Z5J8 1434 aa15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 INSRP06213 1382 aa15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
CTDSPL-202ENST00000310189 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
CTDSPL-202ENST00000310189 CPSF1Q10570 1443 aaKnown RBP15.19■□□□□ 0.02
CTDSPL-202ENST00000310189 PRR36Q9H6K5 1346 aa15.19■□□□□ 0.02
CTDSPL-202ENST00000310189 PLEKHG3A1L390 1219 aa15.19■□□□□ 0.02
CTDSPL-202ENST00000310189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTDSPL-202ENST00000310189 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms