RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 NLRP13Q86W25 1043 aa18.99■□□□□ 0.63
PPM1E-201ENST00000308249 PPP1R1BQ9UD71 204 aaPredicted RBP18.99■□□□□ 0.63
PPM1E-201ENST00000308249 SMARCE1Q969G3 411 aa18.99■□□□□ 0.63
PPM1E-201ENST00000308249 ZHX3Q9H4I2 956 aa18.99■□□□□ 0.63
PPM1E-201ENST00000308249 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
PPM1E-201ENST00000308249 GOLGA6L10A6NI86 522 aa18.98■□□□□ 0.63
PPM1E-201ENST00000308249 ATP2B2Q01814 1243 aa18.98■□□□□ 0.63
PPM1E-201ENST00000308249 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
PPM1E-201ENST00000308249 FILIP1LQ4L180 1135 aa18.97■□□□□ 0.63
PPM1E-201ENST00000308249 EZRP15311 586 aaKnown RBP18.96■□□□□ 0.63
PPM1E-201ENST00000308249 NEBLO76041 1014 aa18.96■□□□□ 0.63
PPM1E-201ENST00000308249 KIAA0754O94854 1291 aa18.96■□□□□ 0.63
PPM1E-201ENST00000308249 FAM193AP78312 1265 aa18.96■□□□□ 0.63
PPM1E-201ENST00000308249 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
PPM1E-201ENST00000308249 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
PPM1E-201ENST00000308249 WASHC2CQ9Y4E1 1318 aa18.96■□□□□ 0.62
PPM1E-201ENST00000308249 CEBPZQ03701 1054 aaKnown RBP18.95■□□□□ 0.62
PPM1E-201ENST00000308249 INTS3Q68E01 1043 aaKnown RBP18.95■□□□□ 0.62
PPM1E-201ENST00000308249 RIC3Q7Z5B4 369 aa18.95■□□□□ 0.62
PPM1E-201ENST00000308249 CCDC66A2RUB6 948 aa18.95■□□□□ 0.62
PPM1E-201ENST00000308249 EEA1Q15075 1411 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 NUCB2P80303 420 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 CLASRPQ8N2M8 674 aaKnown RBP18.94■□□□□ 0.62
PPM1E-201ENST00000308249 GOLGA6L7A0A1B0GV03 622 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 SEPT11Q9NVA2 429 aaKnown RBP18.94■□□□□ 0.62
PPM1E-201ENST00000308249 RBM10P98175 930 aaKnown RBP18.94■□□□□ 0.62
PPM1E-201ENST00000308249 TANGO6Q9C0B7 1094 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 ERC2O15083 957 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 CCDC181Q5TID7 509 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 SPC24Q8NBT2 197 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
PPM1E-201ENST00000308249 DEF6Q9H4E7 631 aa18.93■□□□□ 0.62
PPM1E-201ENST00000308249 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
PPM1E-201ENST00000308249 NASPP49321 788 aaPredicted RBP18.92■□□□□ 0.62
PPM1E-201ENST00000308249 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
PPM1E-201ENST00000308249 PANK3Q9H999 370 aa18.92■□□□□ 0.62
PPM1E-201ENST00000308249 FAM177A1Q8N128 213 aaPredicted RBP18.92■□□□□ 0.62
PPM1E-201ENST00000308249 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
PPM1E-201ENST00000308249 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
PPM1E-201ENST00000308249 DYDC1Q8WWB3 177 aa18.91■□□□□ 0.62
PPM1E-201ENST00000308249 DDX19BQ9UMR2 479 aa18.91■□□□□ 0.62
PPM1E-201ENST00000308249 E9PSI1 815 aa18.91■□□□□ 0.62
PPM1E-201ENST00000308249 HMGN5P82970 282 aaKnown RBP18.91■□□□□ 0.62
PPM1E-201ENST00000308249 TXLNAP40222 546 aa18.91■□□□□ 0.62
PPM1E-201ENST00000308249 ZNHIT6Q9NWK9 470 aaKnown RBP18.9■□□□□ 0.62
PPM1E-201ENST00000308249 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
PPM1E-201ENST00000308249 KINO60870 393 aaKnown RBP18.9■□□□□ 0.62
PPM1E-201ENST00000308249 SART3Q15020 963 aaKnown RBP18.9■□□□□ 0.62
PPM1E-201ENST00000308249 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
PPM1E-201ENST00000308249 PSME1Q06323 249 aa18.89■□□□□ 0.62
PPM1E-201ENST00000308249 GBP2P32456 591 aaPredicted RBP18.88■□□□□ 0.61
PPM1E-201ENST00000308249 MATR3P43243 847 aaKnown RBP eCLIP18.88■□□□□ 0.61
PPM1E-201ENST00000308249 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
PPM1E-201ENST00000308249 RIPK4P57078 832 aa18.88■□□□□ 0.61
PPM1E-201ENST00000308249 FSD1Q9BTV5 496 aa18.88■□□□□ 0.61
PPM1E-201ENST00000308249 CCDC112Q8NEF3 446 aa18.88■□□□□ 0.61
PPM1E-201ENST00000308249 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
PPM1E-201ENST00000308249 SERPINC1P01008 464 aa18.88■□□□□ 0.61
PPM1E-201ENST00000308249 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
PPM1E-201ENST00000308249 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
PPM1E-201ENST00000308249 SSR1P43307 286 aaKnown RBP18.87■□□□□ 0.61
PPM1E-201ENST00000308249 CAVIN1Q6NZI2 390 aaKnown RBP18.87■□□□□ 0.61
PPM1E-201ENST00000308249 MPNDQ8N594 471 aa18.87■□□□□ 0.61
PPM1E-201ENST00000308249 API5Q9BZZ5 524 aaKnown RBP18.87■□□□□ 0.61
PPM1E-201ENST00000308249 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.87■□□□□ 0.61
PPM1E-201ENST00000308249 NF2P35240 595 aa18.87■□□□□ 0.61
PPM1E-201ENST00000308249 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
PPM1E-201ENST00000308249 APAF1O14727 1248 aa18.86■□□□□ 0.61
PPM1E-201ENST00000308249 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.617e-6■■■■□ 19.9
PPM1E-201ENST00000308249 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
PPM1E-201ENST00000308249 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
PPM1E-201ENST00000308249 PSMA5P28066 241 aa18.85■□□□□ 0.61
PPM1E-201ENST00000308249 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.85■□□□□ 0.61
PPM1E-201ENST00000308249 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
PPM1E-201ENST00000308249 C22orf23Q9BZE7 217 aa18.85■□□□□ 0.61
PPM1E-201ENST00000308249 GOLGA6L10A0A0M3HER8 536 aa18.84■□□□□ 0.61
PPM1E-201ENST00000308249 CCP110O43303 1012 aa18.84■□□□□ 0.61
PPM1E-201ENST00000308249 LRRFIP2Q9Y608 721 aaKnown RBP18.84■□□□□ 0.61
PPM1E-201ENST00000308249 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
PPM1E-201ENST00000308249 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
PPM1E-201ENST00000308249 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.61
PPM1E-201ENST00000308249 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
PPM1E-201ENST00000308249 STK38Q15208 465 aa18.83■□□□□ 0.61
PPM1E-201ENST00000308249 ZNF428Q96B54 188 aa18.83■□□□□ 0.61
PPM1E-201ENST00000308249 TSPY26PQ9H489 355 aa18.83■□□□□ 0.6
PPM1E-201ENST00000308249 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
PPM1E-201ENST00000308249 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
PPM1E-201ENST00000308249 KIF15Q9NS87 1388 aa18.82■□□□□ 0.6
PPM1E-201ENST00000308249 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
PPM1E-201ENST00000308249 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
PPM1E-201ENST00000308249 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
PPM1E-201ENST00000308249 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 FIBPO43427 364 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 HMOX1P09601 288 aa18.81■□□□□ 0.6
PPM1E-201ENST00000308249 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms