RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF142P52746 1687 aaPredicted RBP21.34■■□□□ 1.01
HERPUD1-201ENST00000300302 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
HERPUD1-201ENST00000300302 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
HERPUD1-201ENST00000300302 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1.01
HERPUD1-201ENST00000300302 NPC1L1Q9UHC9 1359 aa21.33■■□□□ 1
HERPUD1-201ENST00000300302 SETD1BQ9UPS6 1966 aaKnown RBP21.32■■□□□ 1
HERPUD1-201ENST00000300302 FAM135BQ49AJ0 1406 aa21.32■■□□□ 1
HERPUD1-201ENST00000300302 SRPK2P78362 688 aaKnown RBP21.32■■□□□ 1
HERPUD1-201ENST00000300302 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
HERPUD1-201ENST00000300302 MED14O60244 1454 aa21.31■■□□□ 1
HERPUD1-201ENST00000300302 ATAD2Q6PL18 1390 aa21.31■■□□□ 1
HERPUD1-201ENST00000300302 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
HERPUD1-201ENST00000300302 NLRP13Q86W25 1043 aa21.3■■□□□ 1
HERPUD1-201ENST00000300302 CABP2Q9NPB3 220 aa21.3■■□□□ 1
HERPUD1-201ENST00000300302 CPS1P31327 1500 aa21.3■■□□□ 1
HERPUD1-201ENST00000300302 DIP2AQ14689 1571 aa21.3■■□□□ 1
HERPUD1-201ENST00000300302 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
HERPUD1-201ENST00000300302 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
HERPUD1-201ENST00000300302 WAPLQ7Z5K2 1190 aa21.28■■□□□ 1
HERPUD1-201ENST00000300302 SLC26A8Q96RN1 970 aa21.28■■□□□ 1
HERPUD1-201ENST00000300302 TBX22Q9Y458 520 aa21.28■■□□□ 1
HERPUD1-201ENST00000300302 ANKLE2Q86XL3 938 aa21.27■■□□□ 1
HERPUD1-201ENST00000300302 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
HERPUD1-201ENST00000300302 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
HERPUD1-201ENST00000300302 CDK19Q9BWU1 502 aa21.26■□□□□ 0.99
HERPUD1-201ENST00000300302 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
HERPUD1-201ENST00000300302 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
HERPUD1-201ENST00000300302 HNRNPUQ00839 825 aaKnown RBP eCLIP21.24■□□□□ 0.99
HERPUD1-201ENST00000300302 NSD3Q9BZ95 1437 aa21.23■□□□□ 0.99
HERPUD1-201ENST00000300302 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
HERPUD1-201ENST00000300302 NCKAP5LQ9HCH0 1330 aa21.21■□□□□ 0.99
HERPUD1-201ENST00000300302 USP32Q8NFA0 1604 aa21.21■□□□□ 0.99
HERPUD1-201ENST00000300302 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
HERPUD1-201ENST00000300302 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
HERPUD1-201ENST00000300302 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
HERPUD1-201ENST00000300302 HSPA2P54652 639 aa21.2■□□□□ 0.98
HERPUD1-201ENST00000300302 PIK3R4Q99570 1358 aa21.19■□□□□ 0.98
HERPUD1-201ENST00000300302 PTPRUQ92729 1446 aa21.19■□□□□ 0.98
HERPUD1-201ENST00000300302 AMOTL2Q9Y2J4 779 aa21.19■□□□□ 0.98
HERPUD1-201ENST00000300302 CGNL1Q0VF96 1302 aa21.19■□□□□ 0.98
HERPUD1-201ENST00000300302 PPP2R1AP30153 589 aa21.18■□□□□ 0.98
HERPUD1-201ENST00000300302 PTCH1Q13635 1447 aa21.17■□□□□ 0.98
HERPUD1-201ENST00000300302 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
HERPUD1-201ENST00000300302 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
HERPUD1-201ENST00000300302 ADGRB2O60241 1585 aa21.15■□□□□ 0.98
HERPUD1-201ENST00000300302 NSD2O96028 1365 aa21.15■□□□□ 0.98
HERPUD1-201ENST00000300302 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
HERPUD1-201ENST00000300302 XRN1Q8IZH2 1706 aaKnown RBP21.13■□□□□ 0.97
HERPUD1-201ENST00000300302 CABP1Q9NZU7 370 aa21.13■□□□□ 0.97
HERPUD1-201ENST00000300302 ATP7BP35670 1465 aa21.13■□□□□ 0.97
HERPUD1-201ENST00000300302 LMTK3Q96Q04 1460 aa21.13■□□□□ 0.97
HERPUD1-201ENST00000300302 MORC1Q86VD1 984 aa21.12■□□□□ 0.97
HERPUD1-201ENST00000300302 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
HERPUD1-201ENST00000300302 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
HERPUD1-201ENST00000300302 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
HERPUD1-201ENST00000300302 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
HERPUD1-201ENST00000300302 PPIP5K1Q6PFW1 1433 aa21.09■□□□□ 0.97
HERPUD1-201ENST00000300302 CCDC61Q9Y6R9 512 aa21.09■□□□□ 0.97
HERPUD1-201ENST00000300302 INSRP06213 1382 aa21.08■□□□□ 0.96
HERPUD1-201ENST00000300302 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
HERPUD1-201ENST00000300302 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
HERPUD1-201ENST00000300302 KCNA6P17658 529 aa21.06■□□□□ 0.96
HERPUD1-201ENST00000300302 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
HERPUD1-201ENST00000300302 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
HERPUD1-201ENST00000300302 CDC42BPGQ6DT37 1551 aa21.04■□□□□ 0.96
HERPUD1-201ENST00000300302 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
HERPUD1-201ENST00000300302 PRR36Q9H6K5 1346 aa21.02■□□□□ 0.96
HERPUD1-201ENST00000300302 EDC4Q6P2E9 1401 aaKnown RBP21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 KIF20BQ96Q89 1820 aa21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 FYB1O15117 783 aa21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 ZNF692Q9BU19 519 aaPredicted RBP21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 POLR3AO14802 1390 aaPredicted RBP21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
HERPUD1-201ENST00000300302 TOPAZ1Q8N9V7 1692 aa21■□□□□ 0.95
HERPUD1-201ENST00000300302 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
HERPUD1-201ENST00000300302 BLMP54132 1417 aaPredicted RBP20.99■□□□□ 0.95
HERPUD1-201ENST00000300302 AKAP12Q02952 1782 aa20.98■□□□□ 0.95
HERPUD1-201ENST00000300302 MON2Q7Z3U7 1717 aa20.98■□□□□ 0.95
HERPUD1-201ENST00000300302 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
HERPUD1-201ENST00000300302 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
HERPUD1-201ENST00000300302 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
HERPUD1-201ENST00000300302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.96■□□□□ 0.95
HERPUD1-201ENST00000300302 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
HERPUD1-201ENST00000300302 ANKARQ7Z5J8 1434 aa20.95■□□□□ 0.94
HERPUD1-201ENST00000300302 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
HERPUD1-201ENST00000300302 MTHFSP49914 203 aa20.94■□□□□ 0.94
HERPUD1-201ENST00000300302 STRCQ7RTU9 1775 aa20.94■□□□□ 0.94
HERPUD1-201ENST00000300302 NWD1Q149M9 1564 aa20.93■□□□□ 0.94
HERPUD1-201ENST00000300302 ACEP12821 1306 aa20.93■□□□□ 0.94
HERPUD1-201ENST00000300302 FMN2Q9NZ56 1722 aa20.92■□□□□ 0.94
HERPUD1-201ENST00000300302 NALCNQ8IZF0 1738 aa20.91■□□□□ 0.94
HERPUD1-201ENST00000300302 NKTRP30414 1462 aaKnown RBP20.9■□□□□ 0.94
HERPUD1-201ENST00000300302 ADGRL3Q9HAR2 1447 aa20.9■□□□□ 0.94
HERPUD1-201ENST00000300302 USP6P35125 1406 aa20.89■□□□□ 0.93
HERPUD1-201ENST00000300302 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
HERPUD1-201ENST00000300302 NRKQ7Z2Y5 1582 aa20.88■□□□□ 0.93
HERPUD1-201ENST00000300302 RGPD8O14715 1765 aaPredicted RBP20.88■□□□□ 0.93
HERPUD1-201ENST00000300302 NME9Q86XW9 330 aa20.88■□□□□ 0.93
HERPUD1-201ENST00000300302 COG3Q96JB2 828 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms