RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
CCDC178-201ENST00000300227 CEP170BQ9Y4F5 1589 aaPredicted RBP18.78■□□□□ 0.6
CCDC178-201ENST00000300227 SLIT1O75093 1534 aa18.78■□□□□ 0.6
CCDC178-201ENST00000300227 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC178-201ENST00000300227 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
CCDC178-201ENST00000300227 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.59
CCDC178-201ENST00000300227 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
CCDC178-201ENST00000300227 MYOM1P52179 1685 aa18.75■□□□□ 0.59
CCDC178-201ENST00000300227 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
CCDC178-201ENST00000300227 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
CCDC178-201ENST00000300227 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
CCDC178-201ENST00000300227 ROBO2Q9HCK4 1378 aa18.74■□□□□ 0.59
CCDC178-201ENST00000300227 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
CCDC178-201ENST00000300227 DLC1Q96QB1 1528 aa18.73■□□□□ 0.59
CCDC178-201ENST00000300227 NSD3Q9BZ95 1437 aa18.72■□□□□ 0.59
CCDC178-201ENST00000300227 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
CCDC178-201ENST00000300227 ATAD2Q6PL18 1390 aa18.71■□□□□ 0.59
CCDC178-201ENST00000300227 CABP1Q9NZU7 370 aa18.71■□□□□ 0.59
CCDC178-201ENST00000300227 PTPRUQ92729 1446 aa18.71■□□□□ 0.59
CCDC178-201ENST00000300227 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
CCDC178-201ENST00000300227 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
CCDC178-201ENST00000300227 NUTM2FA1L443 756 aa18.7■□□□□ 0.58
CCDC178-201ENST00000300227 MED14O60244 1454 aa18.7■□□□□ 0.58
CCDC178-201ENST00000300227 PNISRQ8TF01 805 aaKnown RBP18.7■□□□□ 0.58
CCDC178-201ENST00000300227 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
CCDC178-201ENST00000300227 SIRT1Q96EB6 747 aa18.69■□□□□ 0.58
CCDC178-201ENST00000300227 TECPR2O15040 1411 aa18.69■□□□□ 0.58
CCDC178-201ENST00000300227 FAM135BQ49AJ0 1406 aa18.69■□□□□ 0.58
CCDC178-201ENST00000300227 PPP2R1AP30153 589 aa18.68■□□□□ 0.58
CCDC178-201ENST00000300227 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
CCDC178-201ENST00000300227 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
CCDC178-201ENST00000300227 NCKAP5LQ9HCH0 1330 aa18.67■□□□□ 0.58
CCDC178-201ENST00000300227 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
CCDC178-201ENST00000300227 KCNA6P17658 529 aa18.67■□□□□ 0.58
CCDC178-201ENST00000300227 A0A1W2PP64 1363 aa18.67■□□□□ 0.58
CCDC178-201ENST00000300227 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
CCDC178-201ENST00000300227 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
CCDC178-201ENST00000300227 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
CCDC178-201ENST00000300227 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
CCDC178-201ENST00000300227 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
CCDC178-201ENST00000300227 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
CCDC178-201ENST00000300227 CPS1P31327 1500 aa18.64■□□□□ 0.57
CCDC178-201ENST00000300227 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
CCDC178-201ENST00000300227 KDM4FA0A1W2PPD8 638 aa18.62■□□□□ 0.57
CCDC178-201ENST00000300227 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
CCDC178-201ENST00000300227 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
CCDC178-201ENST00000300227 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
CCDC178-201ENST00000300227 HSPA2P54652 639 aa18.61■□□□□ 0.57
CCDC178-201ENST00000300227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC178-201ENST00000300227 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
CCDC178-201ENST00000300227 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
CCDC178-201ENST00000300227 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
CCDC178-201ENST00000300227 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
CCDC178-201ENST00000300227 NPHP4O75161 1426 aaPredicted RBP18.59■□□□□ 0.57
CCDC178-201ENST00000300227 PPIP5K1Q6PFW1 1433 aa18.59■□□□□ 0.57
CCDC178-201ENST00000300227 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.56
CCDC178-201ENST00000300227 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
CCDC178-201ENST00000300227 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
CCDC178-201ENST00000300227 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
CCDC178-201ENST00000300227 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
CCDC178-201ENST00000300227 FYB1O15117 783 aa18.56■□□□□ 0.56
CCDC178-201ENST00000300227 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCDC178-201ENST00000300227 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.55■□□□□ 0.56
CCDC178-201ENST00000300227 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
CCDC178-201ENST00000300227 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
CCDC178-201ENST00000300227 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
CCDC178-201ENST00000300227 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
CCDC178-201ENST00000300227 ATP7BP35670 1465 aa18.52■□□□□ 0.56
CCDC178-201ENST00000300227 MTHFSP49914 203 aa18.52■□□□□ 0.56
CCDC178-201ENST00000300227 NSD2O96028 1365 aa18.51■□□□□ 0.55
CCDC178-201ENST00000300227 ACEP12821 1306 aa18.5■□□□□ 0.55
CCDC178-201ENST00000300227 NME9Q86XW9 330 aa18.5■□□□□ 0.55
CCDC178-201ENST00000300227 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
CCDC178-201ENST00000300227 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
CCDC178-201ENST00000300227 FBLN1P23142 703 aa18.48■□□□□ 0.55
CCDC178-201ENST00000300227 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
CCDC178-201ENST00000300227 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
CCDC178-201ENST00000300227 ZNF692Q9BU19 519 aaPredicted RBP18.47■□□□□ 0.55
CCDC178-201ENST00000300227 PLEKHG3A1L390 1219 aa18.46■□□□□ 0.55
CCDC178-201ENST00000300227 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
CCDC178-201ENST00000300227 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
CCDC178-201ENST00000300227 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
CCDC178-201ENST00000300227 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
CCDC178-201ENST00000300227 EDC4Q6P2E9 1401 aaKnown RBP18.45■□□□□ 0.54
CCDC178-201ENST00000300227 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
CCDC178-201ENST00000300227 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
CCDC178-201ENST00000300227 POLR3AO14802 1390 aaPredicted RBP18.43■□□□□ 0.54
CCDC178-201ENST00000300227 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
CCDC178-201ENST00000300227 COG3Q96JB2 828 aa18.42■□□□□ 0.54
CCDC178-201ENST00000300227 NKTRP30414 1462 aaKnown RBP18.42■□□□□ 0.54
CCDC178-201ENST00000300227 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
CCDC178-201ENST00000300227 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
CCDC178-201ENST00000300227 SOX12O15370 315 aa18.4■□□□□ 0.54
CCDC178-201ENST00000300227 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
CCDC178-201ENST00000300227 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
CCDC178-201ENST00000300227 USP6P35125 1406 aa18.38■□□□□ 0.53
CCDC178-201ENST00000300227 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
CCDC178-201ENST00000300227 ADGRL3Q9HAR2 1447 aa18.38■□□□□ 0.53
CCDC178-201ENST00000300227 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
CCDC178-201ENST00000300227 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms