RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CCDC43Q96MW1 224 aaKnown RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC144AA2RUR9 1427 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 PDCL2Q8N4E4 241 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 NECTIN2Q92692 538 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 IFIT2P09913 472 aaKnown RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 ODF2Q5BJF6 829 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 NAT10Q9H0A0 1025 aaKnown RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 VPS37DQ86XT2 251 aa6.71□□□□□ -1.33
CPSF2-201ENST00000298875 L3MBTL2Q969R5 705 aa6.71□□□□□ -1.33
CPSF2-201ENST00000298875 NEXNQ0ZGT2 675 aa6.71□□□□□ -1.33
CPSF2-201ENST00000298875 TTLL5Q6EMB2 1281 aa6.71□□□□□ -1.33
CPSF2-201ENST00000298875 ERICH2A1L162 156 aa6.71□□□□□ -1.33
CPSF2-201ENST00000298875 PPP6R1Q9UPN7 881 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 SMC3Q9UQE7 1217 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 UACAQ9BZF9 1416 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.34
CPSF2-201ENST00000298875 CPLX2Q6PUV4 134 aaKnown RBP6.71□□□□□ -1.34
CPSF2-201ENST00000298875 FAM107BQ9H098 131 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 H0YHG0 523 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 OLFM4Q6UX06 510 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 GOLGA6L7A0A1B0GV03 622 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 EIF2S2P20042 333 aaKnown RBP6.71□□□□□ -1.34
CPSF2-201ENST00000298875 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.34
CPSF2-201ENST00000298875 EPS15P42566 896 aa6.7□□□□□ -1.34
CPSF2-201ENST00000298875 ZBED9Q6R2W3 1325 aa6.7□□□□□ -1.34
CPSF2-201ENST00000298875 PLEKHH2Q8IVE3 1493 aa6.7□□□□□ -1.34
CPSF2-201ENST00000298875 HNRNPMP52272 730 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPSF2-201ENST00000298875 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
CPSF2-201ENST00000298875 DDX19BQ9UMR2 479 aa6.7□□□□□ -1.34
CPSF2-201ENST00000298875 MSH5O43196 834 aa6.7□□□□□ -1.34
CPSF2-201ENST00000298875 TEX14Q8IWB6 1497 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 NASPP49321 788 aaPredicted RBP6.69□□□□□ -1.34
CPSF2-201ENST00000298875 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 PLCD4Q9BRC7 762 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 USP47Q96K76 1375 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 TRDNQ13061 729 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 CCDC173Q0VFZ6 552 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 ZFYVE27Q5T4F4 411 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 PANK3Q9H999 370 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 BICRAQ9NZM4 1560 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 KIF3BO15066 747 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 SAMD1Q6SPF0 538 aaPredicted RBP6.69□□□□□ -1.34
CPSF2-201ENST00000298875 SYNJ2O15056 1496 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 CHMP5Q9NZZ3 219 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 INTS3Q68E01 1043 aaKnown RBP6.69□□□□□ -1.34
CPSF2-201ENST00000298875 TRAK1Q9UPV9 953 aa6.69□□□□□ -1.34
CPSF2-201ENST00000298875 CCDC73Q6ZRK6 1079 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 COG3Q96JB2 828 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 FHOD3Q2V2M9 1422 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 KDM4AO75164 1064 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 AXDND1Q5T1B0 1012 aaPredicted RBP6.68□□□□□ -1.34
CPSF2-201ENST00000298875 TDRD9Q8NDG6 1382 aaKnown RBP6.68□□□□□ -1.34
CPSF2-201ENST00000298875 TEFQ10587 303 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 WASHC2CQ9Y4E1 1318 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.68□□□□□ -1.34
CPSF2-201ENST00000298875 BRMS1Q9HCU9 246 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 NINLQ9Y2I6 1382 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 MYO6Q9UM54 1294 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 FYB1O15117 783 aa6.68□□□□□ -1.34
CPSF2-201ENST00000298875 CWC22Q9HCG8 908 aaKnown RBP6.68□□□□□ -1.34
CPSF2-201ENST00000298875 DZIP1LQ8IYY4 767 aaKnown RBP6.68□□□□□ -1.34
CPSF2-201ENST00000298875 EVA1CP58658 441 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 SAFBQ15424 915 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPSF2-201ENST00000298875 CCDC27Q2M243 656 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 DEF6Q9H4E7 631 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 EVC2Q86UK5 1308 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 LETM1O95202 739 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-201ENST00000298875 SMC2O95347 1197 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 POLR3GO15318 223 aaPredicted RBP6.67□□□□□ -1.34
CPSF2-201ENST00000298875 C22orf23Q9BZE7 217 aa6.67□□□□□ -1.34
CPSF2-201ENST00000298875 NUCB2P80303 420 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 G3BP1Q13283 466 aaKnown RBP eCLIP6.66□□□□□ -1.344e-6■■□□□ 13.2
CPSF2-201ENST00000298875 LEKR1Q6ZMV7 388 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 SETSIPP0DME0 302 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 FAM69CQ0P6D2 419 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 DDX58O95786 925 aaKnown RBP6.66□□□□□ -1.34
CPSF2-201ENST00000298875 ERC2O15083 957 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 RBM10P98175 930 aaKnown RBP6.66□□□□□ -1.34
CPSF2-201ENST00000298875 SPC24Q8NBT2 197 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 TRIM5Q9C035 493 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 NFKBIBQ15653 356 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 TXLNBQ8N3L3 684 aa6.66□□□□□ -1.34
CPSF2-201ENST00000298875 PSMA5P28066 241 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 SYTL4Q96C24 671 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-201ENST00000298875 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-201ENST00000298875 KIF2AO00139 706 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-201ENST00000298875 UBE2Q2Q8WVN8 375 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 RNF214Q8ND24 703 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 HSP90AB3PQ58FF7 597 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 LNPKQ9C0E8 428 aa6.65□□□□□ -1.34
CPSF2-201ENST00000298875 BRPF1P55201 1214 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-201ENST00000298875 RIPK4P57078 832 aa6.65□□□□□ -1.35
CPSF2-201ENST00000298875 PRKRIP1Q9H875 184 aaPredicted RBP6.65□□□□□ -1.35
CPSF2-201ENST00000298875 APAF1O14727 1248 aa6.65□□□□□ -1.35
CPSF2-201ENST00000298875 DIAPH1O60610 1272 aaKnown RBP6.65□□□□□ -1.35
CPSF2-201ENST00000298875 OFD1O75665 1012 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms