RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MED14O60244 1454 aa21.16■□□□□ 0.98
LSM6-201ENST00000296581 POGKQ9P215 609 aa21.15■□□□□ 0.98
LSM6-201ENST00000296581 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
LSM6-201ENST00000296581 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
LSM6-201ENST00000296581 BRD4O60885 1362 aaPredicted RBP21.14■□□□□ 0.97
LSM6-201ENST00000296581 CPS1P31327 1500 aa21.14■□□□□ 0.97
LSM6-201ENST00000296581 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
LSM6-201ENST00000296581 SETD1BQ9UPS6 1966 aaKnown RBP21.13■□□□□ 0.97
LSM6-201ENST00000296581 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
LSM6-201ENST00000296581 SIRT1Q96EB6 747 aa21.12■□□□□ 0.97
LSM6-201ENST00000296581 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
LSM6-201ENST00000296581 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
LSM6-201ENST00000296581 BCANQ96GW7 911 aa21.1■□□□□ 0.97
LSM6-201ENST00000296581 MINK1Q8N4C8 1332 aaPredicted RBP21.1■□□□□ 0.97
LSM6-201ENST00000296581 DIP2AQ14689 1571 aa21.1■□□□□ 0.97
LSM6-201ENST00000296581 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
LSM6-201ENST00000296581 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
LSM6-201ENST00000296581 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
LSM6-201ENST00000296581 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
LSM6-201ENST00000296581 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.97
LSM6-201ENST00000296581 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.96
LSM6-201ENST00000296581 CABP2Q9NPB3 220 aa21.08■□□□□ 0.96
LSM6-201ENST00000296581 ATAD2Q6PL18 1390 aa21.07■□□□□ 0.96
LSM6-201ENST00000296581 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
LSM6-201ENST00000296581 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
LSM6-201ENST00000296581 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
LSM6-201ENST00000296581 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
LSM6-201ENST00000296581 PNISRQ8TF01 805 aaKnown RBP21.06■□□□□ 0.96
LSM6-201ENST00000296581 TBX22Q9Y458 520 aa21.06■□□□□ 0.96
LSM6-201ENST00000296581 ANKRD36BQ8N2N9 1353 aa21.05■□□□□ 0.96
LSM6-201ENST00000296581 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
LSM6-201ENST00000296581 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
LSM6-201ENST00000296581 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
LSM6-201ENST00000296581 PTPRUQ92729 1446 aa21.03■□□□□ 0.96
LSM6-201ENST00000296581 HNRNPUQ00839 825 aaKnown RBP eCLIP21.02■□□□□ 0.96
LSM6-201ENST00000296581 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.95
LSM6-201ENST00000296581 ROBO2Q9HCK4 1378 aa21.02■□□□□ 0.95
LSM6-201ENST00000296581 ADGRB2O60241 1585 aa21■□□□□ 0.95
LSM6-201ENST00000296581 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
LSM6-201ENST00000296581 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
LSM6-201ENST00000296581 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
LSM6-201ENST00000296581 PTCH1Q13635 1447 aa20.98■□□□□ 0.95
LSM6-201ENST00000296581 WASLO00401 505 aaPredicted RBP20.97■□□□□ 0.95
LSM6-201ENST00000296581 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
LSM6-201ENST00000296581 PIK3R4Q99570 1358 aa20.97■□□□□ 0.95
LSM6-201ENST00000296581 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.97■□□□□ 0.95
LSM6-201ENST00000296581 ANKLE2Q86XL3 938 aa20.97■□□□□ 0.95
LSM6-201ENST00000296581 CGNL1Q0VF96 1302 aa20.95■□□□□ 0.94
LSM6-201ENST00000296581 TERF2IPQ9NYB0 399 aa20.94■□□□□ 0.94
LSM6-201ENST00000296581 AMOTL2Q9Y2J4 779 aa20.94■□□□□ 0.94
LSM6-201ENST00000296581 NSD2O96028 1365 aa20.94■□□□□ 0.94
LSM6-201ENST00000296581 ATP7BP35670 1465 aa20.94■□□□□ 0.94
LSM6-201ENST00000296581 INSRP06213 1382 aa20.93■□□□□ 0.94
LSM6-201ENST00000296581 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
LSM6-201ENST00000296581 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
LSM6-201ENST00000296581 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
LSM6-201ENST00000296581 HDGFL2Q7Z4V5 671 aaPredicted RBP20.89■□□□□ 0.94
LSM6-201ENST00000296581 ANKRD26Q9UPS8 1709 aa20.89■□□□□ 0.93
LSM6-201ENST00000296581 MORC1Q86VD1 984 aa20.88■□□□□ 0.93
LSM6-201ENST00000296581 NUDT16Q96DE0 195 aaKnown RBP20.88■□□□□ 0.93
LSM6-201ENST00000296581 PPIP5K1Q6PFW1 1433 aa20.88■□□□□ 0.93
LSM6-201ENST00000296581 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
LSM6-201ENST00000296581 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
LSM6-201ENST00000296581 CDC42BPGQ6DT37 1551 aa20.87■□□□□ 0.93
LSM6-201ENST00000296581 TOPAZ1Q8N9V7 1692 aa20.87■□□□□ 0.93
LSM6-201ENST00000296581 KIF20BQ96Q89 1820 aa20.86■□□□□ 0.93
LSM6-201ENST00000296581 CCDC61Q9Y6R9 512 aa20.85■□□□□ 0.93
LSM6-201ENST00000296581 BLMP54132 1417 aaPredicted RBP20.85■□□□□ 0.93
LSM6-201ENST00000296581 AKAP12Q02952 1782 aa20.85■□□□□ 0.93
LSM6-201ENST00000296581 PRR36Q9H6K5 1346 aa20.84■□□□□ 0.93
LSM6-201ENST00000296581 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
LSM6-201ENST00000296581 KCNA6P17658 529 aa20.83■□□□□ 0.93
LSM6-201ENST00000296581 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
LSM6-201ENST00000296581 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
LSM6-201ENST00000296581 FYB1O15117 783 aa20.81■□□□□ 0.92
LSM6-201ENST00000296581 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
LSM6-201ENST00000296581 NCKAP5LQ9HCH0 1330 aa20.78■□□□□ 0.92
LSM6-201ENST00000296581 WDR43Q15061 677 aaKnown RBP eCLIP20.78■□□□□ 0.92
LSM6-201ENST00000296581 GGNBP2Q9H3C7 697 aa20.78■□□□□ 0.92
LSM6-201ENST00000296581 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
LSM6-201ENST00000296581 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
LSM6-201ENST00000296581 NWD1Q149M9 1564 aa20.77■□□□□ 0.92
LSM6-201ENST00000296581 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
LSM6-201ENST00000296581 FMN2Q9NZ56 1722 aa20.76■□□□□ 0.91
LSM6-201ENST00000296581 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
LSM6-201ENST00000296581 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
LSM6-201ENST00000296581 NALCNQ8IZF0 1738 aa20.75■□□□□ 0.91
LSM6-201ENST00000296581 NKTRP30414 1462 aaKnown RBP20.75■□□□□ 0.91
LSM6-201ENST00000296581 NRKQ7Z2Y5 1582 aa20.75■□□□□ 0.91
LSM6-201ENST00000296581 ANKARQ7Z5J8 1434 aa20.74■□□□□ 0.91
LSM6-201ENST00000296581 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
LSM6-201ENST00000296581 KDM4FA0A1W2PPD8 638 aa20.74■□□□□ 0.91
LSM6-201ENST00000296581 RGPD8O14715 1765 aaPredicted RBP20.73■□□□□ 0.91
LSM6-201ENST00000296581 MTHFSP49914 203 aa20.73■□□□□ 0.91
LSM6-201ENST00000296581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
LSM6-201ENST00000296581 SMG6Q86US8 1419 aaKnown RBP20.71■□□□□ 0.91
LSM6-201ENST00000296581 ACEP12821 1306 aa20.7■□□□□ 0.9
LSM6-201ENST00000296581 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
LSM6-201ENST00000296581 NUTM2FA1L443 756 aa20.69■□□□□ 0.9
LSM6-201ENST00000296581 USP6P35125 1406 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms