RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
ZNF563-201ENST00000293725 KIAA1211Q6ZU35 1233 aa19.46■□□□□ 0.71
ZNF563-201ENST00000293725 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
ZNF563-201ENST00000293725 ATP10AO60312 1499 aa19.46■□□□□ 0.71
ZNF563-201ENST00000293725 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
ZNF563-201ENST00000293725 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
ZNF563-201ENST00000293725 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
ZNF563-201ENST00000293725 GBP4Q96PP9 640 aa19.45■□□□□ 0.7
ZNF563-201ENST00000293725 DDIT3P35638 169 aa19.45■□□□□ 0.7
ZNF563-201ENST00000293725 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
ZNF563-201ENST00000293725 PDCL3Q9H2J4 239 aa19.45■□□□□ 0.7
ZNF563-201ENST00000293725 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
ZNF563-201ENST00000293725 NCOA3Q9Y6Q9 1424 aa19.44■□□□□ 0.7
ZNF563-201ENST00000293725 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
ZNF563-201ENST00000293725 CDC42BPBQ9Y5S2 1711 aa19.43■□□□□ 0.7
ZNF563-201ENST00000293725 KDM5AP29375 1690 aaKnown RBP19.42■□□□□ 0.7
ZNF563-201ENST00000293725 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
ZNF563-201ENST00000293725 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
ZNF563-201ENST00000293725 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
ZNF563-201ENST00000293725 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
ZNF563-201ENST00000293725 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
ZNF563-201ENST00000293725 SKOR2Q2VWA4 1001 aaPredicted RBP19.41■□□□□ 0.7
ZNF563-201ENST00000293725 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
ZNF563-201ENST00000293725 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
ZNF563-201ENST00000293725 CCDC173Q0VFZ6 552 aa19.4■□□□□ 0.7
ZNF563-201ENST00000293725 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
ZNF563-201ENST00000293725 SNX21Q969T3 373 aa19.39■□□□□ 0.7
ZNF563-201ENST00000293725 MAST1Q9Y2H9 1570 aa19.39■□□□□ 0.69
ZNF563-201ENST00000293725 CIZ1Q9ULV3 898 aaPredicted RBP19.39■□□□□ 0.69
ZNF563-201ENST00000293725 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
ZNF563-201ENST00000293725 CEP152O94986 1710 aa19.38■□□□□ 0.69
ZNF563-201ENST00000293725 RBM25P49756 843 aaKnown RBP19.38■□□□□ 0.69
ZNF563-201ENST00000293725 MORC1Q86VD1 984 aa19.38■□□□□ 0.69
ZNF563-201ENST00000293725 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
ZNF563-201ENST00000293725 ZSCAN30Q86W11 494 aa19.38■□□□□ 0.69
ZNF563-201ENST00000293725 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
ZNF563-201ENST00000293725 RBM10P98175 930 aaKnown RBP19.37■□□□□ 0.69
ZNF563-201ENST00000293725 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
ZNF563-201ENST00000293725 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
ZNF563-201ENST00000293725 ARHGAP5Q13017 1502 aa19.36■□□□□ 0.69
ZNF563-201ENST00000293725 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
ZNF563-201ENST00000293725 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
ZNF563-201ENST00000293725 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
ZNF563-201ENST00000293725 PPP1R9BQ96SB3 815 aa19.35■□□□□ 0.69
ZNF563-201ENST00000293725 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
ZNF563-201ENST00000293725 TTC37Q6PGP7 1564 aa19.35■□□□□ 0.69
ZNF563-201ENST00000293725 PTMSP20962 102 aa19.35■□□□□ 0.69
ZNF563-201ENST00000293725 OFD1O75665 1012 aa19.34■□□□□ 0.69
ZNF563-201ENST00000293725 DUOX2Q9NRD8 1548 aa19.34■□□□□ 0.69
ZNF563-201ENST00000293725 SHPRHQ149N8 1683 aa19.34■□□□□ 0.69
ZNF563-201ENST00000293725 TRIM27P14373 513 aa19.33■□□□□ 0.69
ZNF563-201ENST00000293725 TSR2Q969E8 191 aaKnown RBP19.33■□□□□ 0.69
ZNF563-201ENST00000293725 SPHKAPQ2M3C7 1700 aa19.33■□□□□ 0.69
ZNF563-201ENST00000293725 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
ZNF563-201ENST00000293725 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
ZNF563-201ENST00000293725 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
ZNF563-201ENST00000293725 SSFA2P28290 1259 aa19.32■□□□□ 0.68
ZNF563-201ENST00000293725 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
ZNF563-201ENST00000293725 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
ZNF563-201ENST00000293725 RIPK4P57078 832 aa19.32■□□□□ 0.68
ZNF563-201ENST00000293725 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
ZNF563-201ENST00000293725 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
ZNF563-201ENST00000293725 GOLGA6L22H0YM25 854 aa19.31■□□□□ 0.68
ZNF563-201ENST00000293725 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
ZNF563-201ENST00000293725 KANK1Q14678 1352 aa19.3■□□□□ 0.68
ZNF563-201ENST00000293725 MTHFSP49914 203 aa19.3■□□□□ 0.68
ZNF563-201ENST00000293725 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
ZNF563-201ENST00000293725 STAC3Q96MF2 364 aa19.29■□□□□ 0.68
ZNF563-201ENST00000293725 FAM13BQ9NYF5 915 aa19.29■□□□□ 0.68
ZNF563-201ENST00000293725 R3HCC1Q9Y3T6 440 aaKnown RBP19.29■□□□□ 0.68
ZNF563-201ENST00000293725 EXOSC9Q06265 439 aaKnown RBP19.29■□□□□ 0.68
ZNF563-201ENST00000293725 KIF2CQ99661 725 aa19.29■□□□□ 0.68
ZNF563-201ENST00000293725 K7ELQ4 463 aaPredicted RBP19.28■□□□□ 0.68
ZNF563-201ENST00000293725 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
ZNF563-201ENST00000293725 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
ZNF563-201ENST00000293725 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
ZNF563-201ENST00000293725 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.68
ZNF563-201ENST00000293725 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
ZNF563-201ENST00000293725 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.68
ZNF563-201ENST00000293725 TMEM57Q8N5G2 664 aa19.27■□□□□ 0.68
ZNF563-201ENST00000293725 CFAP53Q96M91 514 aa19.27■□□□□ 0.68
ZNF563-201ENST00000293725 NUCB1Q02818 461 aa19.27■□□□□ 0.67
ZNF563-201ENST00000293725 KLHL40Q2TBA0 621 aa19.27■□□□□ 0.67
ZNF563-201ENST00000293725 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.67
ZNF563-201ENST00000293725 NOB1Q9ULX3 412 aaKnown RBP19.26■□□□□ 0.67
ZNF563-201ENST00000293725 TRPM2O94759 1503 aa19.26■□□□□ 0.67
ZNF563-201ENST00000293725 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
ZNF563-201ENST00000293725 NCLP19338 710 aaKnown RBP19.25■□□□□ 0.67
ZNF563-201ENST00000293725 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
ZNF563-201ENST00000293725 BAG4O95429 457 aaKnown RBP19.25■□□□□ 0.67
ZNF563-201ENST00000293725 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
ZNF563-201ENST00000293725 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
ZNF563-201ENST00000293725 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
ZNF563-201ENST00000293725 ZBTB40Q9NUA8 1239 aa19.24■□□□□ 0.67
ZNF563-201ENST00000293725 TERF1P54274 439 aa19.23■□□□□ 0.67
ZNF563-201ENST00000293725 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
ZNF563-201ENST00000293725 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
ZNF563-201ENST00000293725 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
ZNF563-201ENST00000293725 XPCQ01831 940 aaPredicted RBP19.22■□□□□ 0.67
ZNF563-201ENST00000293725 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms