RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 GOLGA6L1Q8N7Z2 621 aa15.57■□□□□ 0.08
PTCD1-201ENST00000292478 NOL10Q9BSC4 688 aaKnown RBP15.57■□□□□ 0.08
PTCD1-201ENST00000292478 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
PTCD1-201ENST00000292478 PANK1Q8TE04 598 aa15.56■□□□□ 0.08
PTCD1-201ENST00000292478 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
PTCD1-201ENST00000292478 TRDNQ13061 729 aa15.56■□□□□ 0.08
PTCD1-201ENST00000292478 LNPKQ9C0E8 428 aa15.56■□□□□ 0.08
PTCD1-201ENST00000292478 NESP48681 1621 aa15.56■□□□□ 0.08
PTCD1-201ENST00000292478 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-201ENST00000292478 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 TPM1P09493 284 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 TSR1Q2NL82 804 aaKnown RBP15.55■□□□□ 0.08
PTCD1-201ENST00000292478 TPM2P07951 284 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 CCDC30Q5VVM6 783 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 ERBINQ96RT1 1412 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
PTCD1-201ENST00000292478 UBTFL1P0CB47 393 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-201ENST00000292478 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-201ENST00000292478 ANKRD30BQ9BXX2 1392 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 CPLX1O14810 134 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 MAP3K1Q13233 1512 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
PTCD1-201ENST00000292478 SMC3Q9UQE7 1217 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 ATF3P18847 181 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 MCTP1Q6DN14 999 aa15.54■□□□□ 0.08
PTCD1-201ENST00000292478 GPRASP1Q5JY77 1395 aa15.53■□□□□ 0.08
PTCD1-201ENST00000292478 NECTIN2Q92692 538 aa15.53■□□□□ 0.08
PTCD1-201ENST00000292478 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
PTCD1-201ENST00000292478 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
PTCD1-201ENST00000292478 NLRP6P59044 892 aa15.52■□□□□ 0.08
PTCD1-201ENST00000292478 SMG6Q86US8 1419 aaKnown RBP15.52■□□□□ 0.08
PTCD1-201ENST00000292478 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.08
PTCD1-201ENST00000292478 RIC3Q7Z5B4 369 aa15.52■□□□□ 0.07
PTCD1-201ENST00000292478 CUL7Q14999 1698 aa15.51■□□□□ 0.07
PTCD1-201ENST00000292478 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
PTCD1-201ENST00000292478 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
PTCD1-201ENST00000292478 CREBRFQ8IUR6 639 aa15.51■□□□□ 0.07
PTCD1-201ENST00000292478 PSMA5P28066 241 aa15.5■□□□□ 0.07
PTCD1-201ENST00000292478 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
PTCD1-201ENST00000292478 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
PTCD1-201ENST00000292478 MCM2P49736 904 aa15.5■□□□□ 0.07
PTCD1-201ENST00000292478 PLEKHO1Q53GL0 409 aaPredicted RBP15.5■□□□□ 0.07
PTCD1-201ENST00000292478 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
PTCD1-201ENST00000292478 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 NAIPQ13075 1403 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 APPP05067 770 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
PTCD1-201ENST00000292478 ERICH2A1L162 156 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 HIP1O00291 1037 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 CEP89Q96ST8 783 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.49■□□□□ 0.07
PTCD1-201ENST00000292478 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
PTCD1-201ENST00000292478 IQGAP2Q13576 1575 aa15.48■□□□□ 0.07
PTCD1-201ENST00000292478 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
PTCD1-201ENST00000292478 BICD2Q8TD16 824 aa15.48■□□□□ 0.07
PTCD1-201ENST00000292478 ERC1Q8IUD2 1116 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
PTCD1-201ENST00000292478 VPS37DQ86XT2 251 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 CCDC141Q6ZP82 1450 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 TXNDC2Q86VQ3 553 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
PTCD1-201ENST00000292478 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
PTCD1-201ENST00000292478 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
PTCD1-201ENST00000292478 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
PTCD1-201ENST00000292478 VPS53Q5VIR6 699 aa15.46■□□□□ 0.07
PTCD1-201ENST00000292478 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
PTCD1-201ENST00000292478 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.06
PTCD1-201ENST00000292478 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.06
PTCD1-201ENST00000292478 VPS37CA5D8V6 355 aaPredicted RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 RABEP1Q15276 862 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 SASS6Q6UVJ0 657 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 PES1O00541 588 aaKnown RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 CCDC73Q6ZRK6 1079 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
PTCD1-201ENST00000292478 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
PTCD1-201ENST00000292478 GNAI2P04899 355 aa15.44■□□□□ 0.06
PTCD1-201ENST00000292478 A0A0U1RQG5 324 aaPredicted RBP15.44■□□□□ 0.06
PTCD1-201ENST00000292478 LETM1O95202 739 aaPredicted RBP15.44■□□□□ 0.06
PTCD1-201ENST00000292478 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
PTCD1-201ENST00000292478 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
PTCD1-201ENST00000292478 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
PTCD1-201ENST00000292478 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
PTCD1-201ENST00000292478 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
PTCD1-201ENST00000292478 MRE11P49959 708 aa15.43■□□□□ 0.06
PTCD1-201ENST00000292478 GPS2Q13227 327 aa15.43■□□□□ 0.06
PTCD1-201ENST00000292478 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
PTCD1-201ENST00000292478 MAGI1Q96QZ7 1491 aaPredicted RBP15.42■□□□□ 0.06
PTCD1-201ENST00000292478 IPO7O95373 1038 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms