RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 PHF14O94880 888 aa5.31□□□□□ -1.56
NCOA1-201ENST00000288599 GTF2F1P35269 517 aaKnown RBP eCLIP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 MATR3P43243 847 aaKnown RBP eCLIP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
NCOA1-201ENST00000288599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 ZWINTO95229 277 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 CHMP4CQ96CF2 233 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 CHIC2Q9UKJ5 165 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 IPO7O95373 1038 aaKnown RBP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 CCDC175P0C221 793 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 KIF3AQ9Y496 699 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 STK25O00506 426 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 VGFO15240 615 aaPredicted RBP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 NEFHP12036 1026 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 RBM5P52756 815 aaKnown RBP eCLIP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 THOC2Q8NI27 1593 aaKnown RBP5.3□□□□□ -1.56
NCOA1-201ENST00000288599 TAF12Q16514 161 aa5.3□□□□□ -1.56
NCOA1-201ENST00000288599 LAMC3Q9Y6N6 1575 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 NAIPQ13075 1403 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 SEPT6Q14141 434 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 PSMD1Q99460 953 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 ANKRD20A12PQ8NF67 263 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 TCOF1Q13428 1488 aaKnown RBP5.29□□□□□ -1.56
NCOA1-201ENST00000288599 PIP4K2BP78356 416 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 PPP4R3AQ6IN85 833 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 TMOD2Q9NZR1 351 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 HFM1A2PYH4 1435 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 U2SURPO15042 1029 aaKnown RBP5.29□□□□□ -1.56
NCOA1-201ENST00000288599 BMS1Q14692 1282 aaKnown RBP5.29□□□□□ -1.56
NCOA1-201ENST00000288599 ZNF592Q92610 1267 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 MYO6Q9UM54 1294 aa5.29□□□□□ -1.56
NCOA1-201ENST00000288599 UGGT2Q9NYU1 1516 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 LMOD1P29536 600 aaPredicted RBP5.28□□□□□ -1.56
NCOA1-201ENST00000288599 ZNF526Q8TF50 670 aaPredicted RBP5.28□□□□□ -1.56
NCOA1-201ENST00000288599 ZBTB33Q86T24 672 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 KIF3BO15066 747 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 HMGB1P09429 215 aaKnown RBP5.28□□□□□ -1.56
NCOA1-201ENST00000288599 TTC16Q8NEE8 873 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 SF3A1Q15459 793 aaKnown RBP5.28□□□□□ -1.56
NCOA1-201ENST00000288599 SKIDA1Q1XH10 827 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 PTPN23Q9H3S7 1636 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 FHOD3Q2V2M9 1422 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 TEX35Q5T0J7 233 aa5.28□□□□□ -1.56
NCOA1-201ENST00000288599 MPHOSPH6Q99547 160 aaKnown RBP5.28□□□□□ -1.56
NCOA1-201ENST00000288599 VIMP08670 466 aaKnown RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 FOXD4L6Q3SYB3 417 aaPredicted RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 RNF20Q5VTR2 975 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 FOXD4L3Q6VB84 417 aaPredicted RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 NGDNQ8NEJ9 315 aaKnown RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 SPAG9O60271 1321 aaKnown RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 ERICH2A1L162 156 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 TTC5Q8N0Z6 440 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 AKNAQ7Z591 1439 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 OFD1O75665 1012 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 KIF20AO95235 890 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 SRCIN1Q9C0H9 1055 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 STAMBPO95630 424 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 TRIM29Q14134 588 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 SEPT7Q16181 437 aaKnown RBP5.27□□□□□ -1.57
NCOA1-201ENST00000288599 FAM200AQ8TCP9 573 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 PPM1EQ8WY54 764 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 FGD6Q6ZV73 1430 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 REC8O95072 547 aa5.27□□□□□ -1.57
NCOA1-201ENST00000288599 HMGB1P1B2RPK0 211 aaPredicted RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 ATF3P18847 181 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 CPLX2Q6PUV4 134 aaKnown RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 RBM27Q9P2N5 1060 aaKnown RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 PPP1R9BQ96SB3 815 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 MAP7D2Q96T17 732 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 TRIM5Q9C035 493 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 C1orf141Q5JVX7 400 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 PRKAG2Q9UGJ0 569 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 HSP90AB3PQ58FF7 597 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 HINFPQ9BQA5 517 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 SH3BP5O60239 455 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 ATP2B1P20020 1258 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 NAP1L1P55209 391 aaKnown RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 ANAPC15P60006 121 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 STK31Q9BXU1 1019 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 CCDC39Q9UFE4 941 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 SPATA31E1Q6ZUB1 1445 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 PRC1O43663 620 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 KMT5BQ4FZB7 885 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 HDGFL2Q7Z4V5 671 aaPredicted RBP5.26□□□□□ -1.57
NCOA1-201ENST00000288599 TRIM22Q8IYM9 498 aa5.26□□□□□ -1.57
NCOA1-201ENST00000288599 XRCC6P12956 609 aaKnown RBP eCLIP5.25□□□□□ -1.57
NCOA1-201ENST00000288599 NF2P35240 595 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 ARHGEF6Q15052 776 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 HS1BP3Q53T59 392 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 TMC2Q8TDI7 906 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 LRRC45Q96CN5 670 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 KNSTRNQ9Y448 316 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 GCC2Q8IWJ2 1684 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 SOGA3Q5TF21 947 aa5.25□□□□□ -1.57
NCOA1-201ENST00000288599 CCDC82Q8N4S0 544 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms