RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
SDE2-201ENST00000272091 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
SDE2-201ENST00000272091 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
SDE2-201ENST00000272091 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
SDE2-201ENST00000272091 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
SDE2-201ENST00000272091 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
SDE2-201ENST00000272091 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
SDE2-201ENST00000272091 MINK1Q8N4C8 1332 aaPredicted RBP16.49■□□□□ 0.23
SDE2-201ENST00000272091 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
SDE2-201ENST00000272091 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
SDE2-201ENST00000272091 WAPLQ7Z5K2 1190 aa16.48■□□□□ 0.23
SDE2-201ENST00000272091 NLRP13Q86W25 1043 aa16.48■□□□□ 0.23
SDE2-201ENST00000272091 CD163L1Q9NR16 1453 aa16.47■□□□□ 0.23
SDE2-201ENST00000272091 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
SDE2-201ENST00000272091 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
SDE2-201ENST00000272091 POGKQ9P215 609 aa16.47■□□□□ 0.23
SDE2-201ENST00000272091 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
SDE2-201ENST00000272091 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
SDE2-201ENST00000272091 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
SDE2-201ENST00000272091 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
SDE2-201ENST00000272091 DIP2AQ14689 1571 aa16.45■□□□□ 0.22
SDE2-201ENST00000272091 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
SDE2-201ENST00000272091 ROBO2Q9HCK4 1378 aa16.44■□□□□ 0.22
SDE2-201ENST00000272091 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
SDE2-201ENST00000272091 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
SDE2-201ENST00000272091 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
SDE2-201ENST00000272091 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 ATAD2Q6PL18 1390 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
SDE2-201ENST00000272091 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
SDE2-201ENST00000272091 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
SDE2-201ENST00000272091 BCANQ96GW7 911 aa16.4■□□□□ 0.22
SDE2-201ENST00000272091 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
SDE2-201ENST00000272091 ANKRD26Q9UPS8 1709 aa16.4■□□□□ 0.22
SDE2-201ENST00000272091 ZBED9Q6R2W3 1325 aa16.4■□□□□ 0.22
SDE2-201ENST00000272091 SETD1BQ9UPS6 1966 aaKnown RBP16.39■□□□□ 0.21
SDE2-201ENST00000272091 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
SDE2-201ENST00000272091 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
SDE2-201ENST00000272091 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
SDE2-201ENST00000272091 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
SDE2-201ENST00000272091 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
SDE2-201ENST00000272091 SHPRHQ149N8 1683 aa16.36■□□□□ 0.21
SDE2-201ENST00000272091 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
SDE2-201ENST00000272091 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
SDE2-201ENST00000272091 ATP7BP35670 1465 aa16.35■□□□□ 0.21
SDE2-201ENST00000272091 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
SDE2-201ENST00000272091 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
SDE2-201ENST00000272091 INSRP06213 1382 aa16.34■□□□□ 0.21
SDE2-201ENST00000272091 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
SDE2-201ENST00000272091 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
SDE2-201ENST00000272091 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
SDE2-201ENST00000272091 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
SDE2-201ENST00000272091 AMOTL2Q9Y2J4 779 aa16.33■□□□□ 0.2
SDE2-201ENST00000272091 NSD2O96028 1365 aa16.33■□□□□ 0.2
SDE2-201ENST00000272091 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
SDE2-201ENST00000272091 CPSF1Q10570 1443 aaKnown RBP16.32■□□□□ 0.2
SDE2-201ENST00000272091 ITSN1Q15811 1721 aa16.32■□□□□ 0.2
SDE2-201ENST00000272091 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
SDE2-201ENST00000272091 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
SDE2-201ENST00000272091 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
SDE2-201ENST00000272091 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
SDE2-201ENST00000272091 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
SDE2-201ENST00000272091 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
SDE2-201ENST00000272091 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
SDE2-201ENST00000272091 NUDT16Q96DE0 195 aaKnown RBP16.29■□□□□ 0.2
SDE2-201ENST00000272091 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
SDE2-201ENST00000272091 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
SDE2-201ENST00000272091 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
SDE2-201ENST00000272091 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
SDE2-201ENST00000272091 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
SDE2-201ENST00000272091 FYB1O15117 783 aa16.28■□□□□ 0.2
SDE2-201ENST00000272091 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
SDE2-201ENST00000272091 KCNA6P17658 529 aa16.26■□□□□ 0.19
SDE2-201ENST00000272091 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
SDE2-201ENST00000272091 GGNBP2Q9H3C7 697 aa16.26■□□□□ 0.19
SDE2-201ENST00000272091 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
SDE2-201ENST00000272091 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
SDE2-201ENST00000272091 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
SDE2-201ENST00000272091 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
SDE2-201ENST00000272091 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
SDE2-201ENST00000272091 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
SDE2-201ENST00000272091 NWD1Q149M9 1564 aa16.22■□□□□ 0.19
SDE2-201ENST00000272091 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
SDE2-201ENST00000272091 MTHFSP49914 203 aa16.21■□□□□ 0.19
SDE2-201ENST00000272091 WDR43Q15061 677 aaKnown RBP eCLIP16.21■□□□□ 0.19
SDE2-201ENST00000272091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
SDE2-201ENST00000272091 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
SDE2-201ENST00000272091 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
SDE2-201ENST00000272091 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
SDE2-201ENST00000272091 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
SDE2-201ENST00000272091 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
SDE2-201ENST00000272091 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
SDE2-201ENST00000272091 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
SDE2-201ENST00000272091 NME9Q86XW9 330 aa16.18■□□□□ 0.18
SDE2-201ENST00000272091 ACEP12821 1306 aa16.17■□□□□ 0.18
SDE2-201ENST00000272091 STRCP1A6NGW2 1772 aa16.17■□□□□ 0.18
SDE2-201ENST00000272091 USP6P35125 1406 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms